Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN20P56880 AC146507.2-201ENST00000460608 476 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 RPL7P5-201ENST00000471472 736 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 KC877373.1-201ENST00000479066 408 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 AC233702.1-201ENST00000482905 502 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 AL163973.1-201ENST00000484753 577 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 RN7SKP219-201ENST00000516825 296 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 RNU6-835P-201ENST00000516974 104 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 RNU6-685P-201ENST00000517088 95 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 AC005476.1-201ENST00000554427 397 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.03□□□□□ -1.92
CLDN20P56880 MIR4703-201ENST00000577728 79 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 SNORA59B-202ENST00000578183 701 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 MIR4276-201ENST00000584832 70 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 AC007179.3-201ENST00000604976 235 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 AL158032.1-201ENST00000605401 106 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 AC008945.2-201ENST00000606056 604 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
CLDN20P56880 AC007014.2-201ENST00000615581 479 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 AL356321.1-201ENST00000621360 228 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 AC027309.3-201ENST00000623419 351 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.03□□□□□ -1.92
CLDN20P56880 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN20P56880 CKAP2P1-201ENST00000555477 2049 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.93
CLDN20P56880 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
CLDN20P56880 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.02□□□□□ -1.93
CLDN20P56880 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN20P56880 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN20P56880 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.02□□□□□ -1.93
CLDN20P56880 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN20P56880 TPTE2P4-201ENST00000258589 1605 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN20P56880 AL139276.1-201ENST00000311910 1001 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN20P56880 RNU6-1287P-201ENST00000362914 107 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 RNA5SP387-201ENST00000364226 106 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 Y_RNA.245-201ENST00000364493 95 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 Y_RNA.256-201ENST00000364594 104 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 DYNLT3P1-201ENST00000378574 347 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 RNU6-1060P-201ENST00000384664 107 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 SNORA1.3-201ENST00000384676 136 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 MIR325-201ENST00000385260 98 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 FAT1P1-201ENST00000406588 507 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 AC092047.1-201ENST00000424997 240 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.02□□□□□ -1.93
CLDN20P56880 AC005300.1-201ENST00000428401 373 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 SNRPEP4-201ENST00000435815 279 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 SEPT14P3-201ENST00000439401 183 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 AL732372.2-207ENST00000445840 183 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 DPPA3P1-201ENST00000448050 469 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 AC073415.1-201ENST00000449240 153 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 ELOCP23-201ENST00000452014 332 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 SEPT14P2-201ENST00000453405 183 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 snoU13.22-201ENST00000459428 104 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 RPL21P13-201ENST00000488305 481 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 AC092436.1-201ENST00000506450 503 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 AC117522.3-201ENST00000507974 584 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 RBBP4P6-201ENST00000508098 202 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 SEPT14P4-201ENST00000513445 186 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 RNA5SP290-201ENST00000517133 127 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 AC107934.2-201ENST00000518653 310 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 FO082796.1-201ENST00000523795 183 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 AC022690.1-201ENST00000526681 550 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 AP005435.4-201ENST00000529514 284 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.02□□□□□ -1.93
CLDN20P56880 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.02□□□□□ -1.93
CLDN20P56880 BNIP3P22-201ENST00000593399 556 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 BNIP3P9-201ENST00000603714 553 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 AL162713.1-201ENST00000604480 262 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 RBM11P1-201ENST00000604951 799 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 YWHAEP7-203ENST00000622054 312 ntBASIC3.02□□□□□ -1.93
CLDN20P56880 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.02□□□□□ -1.93
CLDN20P56880 FER-210ENST00000628534 558 ntTSL 5 BASIC3.02□□□□□ -1.93
CLDN20P56880 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN20P56880 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.02□□□□□ -1.93
CLDN20P56880 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
CLDN20P56880 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CLDN20P56880 RNU6-512P-201ENST00000364438 103 ntBASIC3.01□□□□□ -1.93
CLDN20P56880 Y_RNA.248-201ENST00000364501 109 ntBASIC3.01□□□□□ -1.93
CLDN20P56880 Y_RNA.534-201ENST00000384599 112 ntBASIC3.01□□□□□ -1.93
CLDN20P56880 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CLDN20P56880 RNU6-550P-201ENST00000391057 101 ntBASIC3.01□□□□□ -1.93
CLDN20P56880 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLDN20P56880 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLDN20P56880 RNU6-908P-201ENST00000410160 94 ntBASIC3.01□□□□□ -1.93
CLDN20P56880 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN20P56880 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN20P56880 AL158156.1-201ENST00000422509 473 ntBASIC3.01□□□□□ -1.93
CLDN20P56880 MTCYBP8-201ENST00000422855 651 ntBASIC3.01□□□□□ -1.93
CLDN20P56880 RPL7P46-201ENST00000425129 740 ntBASIC3.01□□□□□ -1.93
CLDN20P56880 AC005326.1-201ENST00000429197 123 ntBASIC3.01□□□□□ -1.93
CLDN20P56880 RPL23AP69-201ENST00000431134 458 ntBASIC3.01□□□□□ -1.93
CLDN20P56880 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN20P56880 AL512844.2-201ENST00000433990 593 ntBASIC3.01□□□□□ -1.93
CLDN20P56880 RPS24P13-201ENST00000442520 397 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms