Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.38□□□□□ -1.87
HDAC4P56524 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.38□□□□□ -1.87
HDAC4P56524 AL157817.1-201ENST00000614264 790 ntBASIC3.38□□□□□ -1.87
HDAC4P56524 U6atac.1-201ENST00000616025 117 ntBASIC3.38□□□□□ -1.87
HDAC4P56524 AC027309.3-201ENST00000623419 351 ntBASIC3.38□□□□□ -1.87
HDAC4P56524 AC139792.3-201ENST00000623525 224 ntBASIC3.38□□□□□ -1.87
HDAC4P56524 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.38□□□□□ -1.87
HDAC4P56524 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
HDAC4P56524 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HDAC4P56524 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HDAC4P56524 AL035425.3-201ENST00000564206 4996 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
HDAC4P56524 ZNF680P1-201ENST00000436625 1469 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.37□□□□□ -1.87
HDAC4P56524 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HDAC4P56524 AC073343.1-201ENST00000328239 651 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 RNU6-1283P-201ENST00000365314 105 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
HDAC4P56524 Y_RNA.450-201ENST00000384198 113 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 RNU6-1158P-201ENST00000391167 107 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 SNORD115-47-201ENST00000391226 86 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 AL357075.1-201ENST00000404107 726 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 CIR1P3-201ENST00000405137 479 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 RNU2-9P-201ENST00000410194 145 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.37□□□□□ -1.87
HDAC4P56524 AC114491.1-201ENST00000416095 246 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 TIMM9P3-201ENST00000428659 274 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 AC005326.1-201ENST00000429197 123 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 AC009237.8-201ENST00000445492 379 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 Z75741.1-201ENST00000446793 314 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 RPL23AP20-201ENST00000447965 421 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 FDX1P2-201ENST00000450769 375 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 RNU6-420P-201ENST00000458780 107 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.37□□□□□ -1.87
HDAC4P56524 AC006445.2-201ENST00000510061 472 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 RPL23AP94-201ENST00000512518 302 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 RNU1-143P-201ENST00000516296 146 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 Y_RNA.693-201ENST00000516641 110 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 Y_RNA.704-201ENST00000516851 102 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.37□□□□□ -1.87
HDAC4P56524 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.37□□□□□ -1.87
HDAC4P56524 AP006587.4-201ENST00000526053 529 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 OR5AQ1P-201ENST00000527596 927 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 AC104383.1-201ENST00000530297 370 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 AP003034.1-201ENST00000534621 422 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 AL359212.1-201ENST00000556608 614 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 AC002545.1-201ENST00000592511 181 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.37□□□□□ -1.87
HDAC4P56524 U1.23-201ENST00000610293 146 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 RNU1-68P-201ENST00000615382 146 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.37□□□□□ -1.87
HDAC4P56524 AC090132.2-201ENST00000615881 347 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 AL589994.2-201ENST00000621124 579 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 U1.39-201ENST00000621562 146 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.37□□□□□ -1.87
HDAC4P56524 AL137003.2-201ENST00000606924 2538 ntBASIC3.37□□□□□ -1.87
HDAC4P56524 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HDAC4P56524 FAM35BP-202ENST00000497389 3337 ntBASIC3.36□□□□□ -1.87
HDAC4P56524 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HDAC4P56524 AC092435.3-201ENST00000565538 3654 ntBASIC3.36□□□□□ -1.87
HDAC4P56524 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HDAC4P56524 SNORD56.3-201ENST00000363507 71 ntBASIC3.36□□□□□ -1.87
HDAC4P56524 RNU6-960P-201ENST00000364056 120 ntBASIC3.36□□□□□ -1.87
HDAC4P56524 RNU4-12P-201ENST00000365233 139 ntBASIC3.36□□□□□ -1.87
HDAC4P56524 RNU6-641P-201ENST00000384006 107 ntBASIC3.36□□□□□ -1.87
HDAC4P56524 RNU6-701P-201ENST00000384059 107 ntBASIC3.36□□□□□ -1.87
HDAC4P56524 U3.26-201ENST00000391236 204 ntBASIC3.36□□□□□ -1.87
HDAC4P56524 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.36□□□□□ -1.87
HDAC4P56524 AL590002.1-201ENST00000406554 418 ntBASIC3.36□□□□□ -1.87
HDAC4P56524 ZNF90P2-204ENST00000419323 1075 ntBASIC3.36□□□□□ -1.87
HDAC4P56524 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.36□□□□□ -1.87
HDAC4P56524 RBMX2P4-201ENST00000441256 376 ntBASIC3.36□□□□□ -1.87
HDAC4P56524 AC115115.1-201ENST00000449927 248 ntBASIC3.36□□□□□ -1.87
HDAC4P56524 BX510359.1-201ENST00000456973 237 ntBASIC3.36□□□□□ -1.87
HDAC4P56524 AL049873.1-201ENST00000480540 376 ntBASIC3.36□□□□□ -1.87
HDAC4P56524 AC079382.1-201ENST00000493346 557 ntBASIC3.36□□□□□ -1.87
HDAC4P56524 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.36□□□□□ -1.87
HDAC4P56524 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.36□□□□□ -1.87
HDAC4P56524 CASP1P1-201ENST00000526345 212 ntBASIC3.36□□□□□ -1.87
HDAC4P56524 AP001646.1-201ENST00000527936 915 ntBASIC3.36□□□□□ -1.87
HDAC4P56524 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.36□□□□□ -1.87
HDAC4P56524 AC010653.1-201ENST00000571108 881 ntBASIC3.36□□□□□ -1.87
HDAC4P56524 DPPA3P3-201ENST00000603842 430 ntBASIC3.36□□□□□ -1.87
HDAC4P56524 AC007619.2-201ENST00000605743 379 ntBASIC3.36□□□□□ -1.87
HDAC4P56524 AC007014.2-201ENST00000615581 479 ntBASIC3.36□□□□□ -1.87
HDAC4P56524 AL138880.2-201ENST00000616214 239 ntBASIC3.36□□□□□ -1.87
HDAC4P56524 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.36□□□□□ -1.87
HDAC4P56524 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.36□□□□□ -1.87
HDAC4P56524 MIR3688-2-201ENST00000636963 87 ntBASIC3.36□□□□□ -1.87
HDAC4P56524 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.36□□□□□ -1.87
HDAC4P56524 AC008264.2-201ENST00000610193 3731 ntBASIC3.36□□□□□ -1.87
HDAC4P56524 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.35□□□□□ -1.87
HDAC4P56524 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
HDAC4P56524 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HDAC4P56524 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HDAC4P56524 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HDAC4P56524 RNU6-1120P-201ENST00000362988 108 ntBASIC3.35□□□□□ -1.87
HDAC4P56524 Y_RNA.248-201ENST00000364501 109 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms