Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.92□□□□□ -1.94
CDH13P55290 AL353678.1-201ENST00000422735 741 ntBASIC2.92□□□□□ -1.94
CDH13P55290 SKA2P1-201ENST00000425592 390 ntBASIC2.92□□□□□ -1.94
CDH13P55290 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.92□□□□□ -1.94
CDH13P55290 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.92□□□□□ -1.94
CDH13P55290 MTCO2P11-201ENST00000431069 680 ntBASIC2.92□□□□□ -1.94
CDH13P55290 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.92□□□□□ -1.94
CDH13P55290 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.92□□□□□ -1.94
CDH13P55290 AC006028.1-201ENST00000438379 402 ntBASIC2.92□□□□□ -1.94
CDH13P55290 BRK1P2-201ENST00000442875 223 ntBASIC2.92□□□□□ -1.94
CDH13P55290 FABP5P13-201ENST00000452144 328 ntBASIC2.92□□□□□ -1.94
CDH13P55290 RPL36AP51-201ENST00000487216 318 ntBASIC2.92□□□□□ -1.94
CDH13P55290 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.92□□□□□ -1.94
CDH13P55290 AC023194.1-201ENST00000493084 308 ntBASIC2.92□□□□□ -1.94
CDH13P55290 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.92□□□□□ -1.94
CDH13P55290 AC091133.4-201ENST00000511142 308 ntBASIC2.92□□□□□ -1.94
CDH13P55290 RNU6-1315P-201ENST00000517187 99 ntBASIC2.92□□□□□ -1.94
CDH13P55290 AC022634.1-201ENST00000520765 532 ntBASIC2.92□□□□□ -1.94
CDH13P55290 AP001646.1-201ENST00000527936 915 ntBASIC2.92□□□□□ -1.94
CDH13P55290 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.92□□□□□ -1.94
CDH13P55290 HMGN2P15-201ENST00000585707 270 ntBASIC2.92□□□□□ -1.94
CDH13P55290 MIR15A-201ENST00000607334 83 ntBASIC2.92□□□□□ -1.94
CDH13P55290 AC084757.4-201ENST00000616350 526 ntBASIC2.92□□□□□ -1.94
CDH13P55290 AC012314.7-201ENST00000619693 93 ntBASIC2.92□□□□□ -1.94
CDH13P55290 AL512643.1-201ENST00000635735 524 ntBASIC2.92□□□□□ -1.94
CDH13P55290 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.92□□□□□ -1.94
CDH13P55290 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CDH13P55290 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.92□□□□□ -1.94
CDH13P55290 ELF2P3-201ENST00000445099 1506 ntBASIC2.92□□□□□ -1.94
CDH13P55290 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.92□□□□□ -1.94
CDH13P55290 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.92□□□□□ -1.94
CDH13P55290 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CDH13P55290 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CDH13P55290 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CDH13P55290 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.91□□□□□ -1.94
CDH13P55290 AC108206.1-201ENST00000570186 4159 ntBASIC2.91□□□□□ -1.94
CDH13P55290 MIR22-201ENST00000362190 85 ntBASIC2.91□□□□□ -1.94
CDH13P55290 RNU6-623P-201ENST00000363143 105 ntBASIC2.91□□□□□ -1.94
CDH13P55290 Y_RNA.367-201ENST00000365544 101 ntBASIC2.91□□□□□ -1.94
CDH13P55290 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CDH13P55290 MIR454-201ENST00000390180 115 ntBASIC2.91□□□□□ -1.94
CDH13P55290 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CDH13P55290 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.91□□□□□ -1.94
CDH13P55290 RNU2-16P-201ENST00000410712 136 ntBASIC2.91□□□□□ -1.94
CDH13P55290 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.91□□□□□ -1.94
CDH13P55290 AC092809.3-201ENST00000415453 231 ntBASIC2.91□□□□□ -1.94
CDH13P55290 MORF4L1P6-201ENST00000418771 268 ntBASIC2.91□□□□□ -1.94
CDH13P55290 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.91□□□□□ -1.94
CDH13P55290 BPY2DP-201ENST00000422208 265 ntBASIC2.91□□□□□ -1.94
CDH13P55290 CALM2P2-201ENST00000428512 440 ntBASIC2.91□□□□□ -1.94
CDH13P55290 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CDH13P55290 AL358934.1-201ENST00000432346 324 ntBASIC2.91□□□□□ -1.94
CDH13P55290 AC098831.1-201ENST00000440661 216 ntBASIC2.91□□□□□ -1.94
CDH13P55290 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.91□□□□□ -1.94
CDH13P55290 AC003071.1-201ENST00000451219 789 ntBASIC2.91□□□□□ -1.94
CDH13P55290 PRSS3P4-201ENST00000453323 162 ntBASIC2.91□□□□□ -1.94
CDH13P55290 AC126182.1-201ENST00000478134 357 ntBASIC2.91□□□□□ -1.94
CDH13P55290 RPS27AP10-201ENST00000496103 208 ntBASIC2.91□□□□□ -1.94
CDH13P55290 SUMO2P6-201ENST00000505273 288 ntBASIC2.91□□□□□ -1.94
CDH13P55290 SLC25A15P5-201ENST00000508033 253 ntBASIC2.91□□□□□ -1.94
CDH13P55290 AC010493.1-201ENST00000513479 292 ntBASIC2.91□□□□□ -1.94
CDH13P55290 RNU1-103P-201ENST00000516502 125 ntBASIC2.91□□□□□ -1.94
CDH13P55290 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.91□□□□□ -1.94
CDH13P55290 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.91□□□□□ -1.94
CDH13P55290 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.91□□□□□ -1.94
CDH13P55290 AC010546.1-201ENST00000569391 485 ntBASIC2.91□□□□□ -1.94
CDH13P55290 MIR1273C-201ENST00000578669 77 ntBASIC2.91□□□□□ -1.94
CDH13P55290 AC064807.4-201ENST00000607201 407 ntBASIC2.91□□□□□ -1.94
CDH13P55290 AC104073.3-201ENST00000610942 955 ntBASIC2.91□□□□□ -1.94
CDH13P55290 AC069234.5-201ENST00000611056 416 ntBASIC2.91□□□□□ -1.94
CDH13P55290 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.91□□□□□ -1.94
CDH13P55290 AC025034.2-201ENST00000623264 286 ntBASIC2.91□□□□□ -1.94
CDH13P55290 AC093648.1-201ENST00000623546 606 ntBASIC2.91□□□□□ -1.94
CDH13P55290 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.91□□□□□ -1.94
CDH13P55290 AC110079.1-202ENST00000635213 138 ntBASIC2.91□□□□□ -1.94
CDH13P55290 LRRC77P-213ENST00000637727 880 ntBASIC2.91□□□□□ -1.94
CDH13P55290 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDH13P55290 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDH13P55290 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDH13P55290 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CDH13P55290 AC110491.1-201ENST00000562191 2010 ntBASIC2.9□□□□□ -1.94
CDH13P55290 NACAP2-201ENST00000318548 624 ntBASIC2.9□□□□□ -1.95
CDH13P55290 RNA5SP72-201ENST00000364442 117 ntBASIC2.9□□□□□ -1.95
CDH13P55290 RNA5SP267-201ENST00000364893 126 ntBASIC2.9□□□□□ -1.95
CDH13P55290 SNORA4.3-201ENST00000365564 137 ntBASIC2.9□□□□□ -1.95
CDH13P55290 RNU6-456P-201ENST00000384493 107 ntBASIC2.9□□□□□ -1.95
CDH13P55290 RNA5SP120-201ENST00000410900 112 ntBASIC2.9□□□□□ -1.95
CDH13P55290 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH13P55290 AC016907.1-201ENST00000419483 435 ntBASIC2.9□□□□□ -1.95
CDH13P55290 AL645937.1-202ENST00000421799 937 ntBASIC2.9□□□□□ -1.95
CDH13P55290 AL158156.1-201ENST00000422509 473 ntBASIC2.9□□□□□ -1.95
CDH13P55290 MTCYBP5-201ENST00000423752 1135 ntBASIC2.9□□□□□ -1.95
CDH13P55290 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH13P55290 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH13P55290 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.9□□□□□ -1.95
CDH13P55290 RPS3AP17-201ENST00000472594 777 ntBASIC2.9□□□□□ -1.95
CDH13P55290 RPS26P21-201ENST00000475397 348 ntBASIC2.9□□□□□ -1.95
CDH13P55290 HMGB1P29-201ENST00000505659 499 ntBASIC2.9□□□□□ -1.95
CDH13P55290 AC009901.1-201ENST00000506703 541 ntBASIC2.9□□□□□ -1.95
CDH13P55290 RN7SKP282-201ENST00000516824 299 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms