Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL669831.1-202ENST00000428504 417 ntBASIC3.19□□□□□ -1.9
CDH12P55289 AL356867.1-201ENST00000429623 299 ntBASIC3.19□□□□□ -1.9
CDH12P55289 AL592045.1-201ENST00000429867 352 ntBASIC3.19□□□□□ -1.9
CDH12P55289 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.19□□□□□ -1.9
CDH12P55289 HSPD1P21-201ENST00000436541 245 ntBASIC3.19□□□□□ -1.9
CDH12P55289 GTF2IP13-201ENST00000438487 386 ntBASIC3.19□□□□□ -1.9
CDH12P55289 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH12P55289 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.19□□□□□ -1.9
CDH12P55289 HMGB3P8-201ENST00000449709 577 ntBASIC3.19□□□□□ -1.9
CDH12P55289 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH12P55289 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH12P55289 RNU6-1208P-201ENST00000459588 107 ntBASIC3.19□□□□□ -1.9
CDH12P55289 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH12P55289 PSMA3P-201ENST00000555485 635 ntBASIC3.19□□□□□ -1.9
CDH12P55289 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH12P55289 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH12P55289 MIR4697-201ENST00000582977 78 ntBASIC3.19□□□□□ -1.9
CDH12P55289 AC021646.1-201ENST00000605469 484 ntBASIC3.19□□□□□ -1.9
CDH12P55289 AC092807.2-201ENST00000609367 243 ntBASIC3.19□□□□□ -1.9
CDH12P55289 AC009570.1-201ENST00000609599 745 ntBASIC3.19□□□□□ -1.9
CDH12P55289 AC009248.2-201ENST00000619826 254 ntBASIC3.19□□□□□ -1.9
CDH12P55289 AC104985.2-201ENST00000620598 500 ntBASIC3.19□□□□□ -1.9
CDH12P55289 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH12P55289 AC092628.2-201ENST00000622492 339 ntBASIC3.19□□□□□ -1.9
CDH12P55289 AC005858.4-201ENST00000623191 700 ntBASIC3.19□□□□□ -1.9
CDH12P55289 AP003400.5-201ENST00000624827 617 ntBASIC3.19□□□□□ -1.9
CDH12P55289 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDH12P55289 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDH12P55289 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDH12P55289 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDH12P55289 AF127577.6-201ENST00000623352 2191 ntBASIC3.19□□□□□ -1.9
CDH12P55289 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDH12P55289 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDH12P55289 AC008568.2-201ENST00000623862 2313 ntBASIC3.19□□□□□ -1.9
CDH12P55289 AC032011.1-201ENST00000611703 1549 ntBASIC3.19□□□□□ -1.9
CDH12P55289 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDH12P55289 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDH12P55289 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.18□□□□□ -1.9
CDH12P55289 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDH12P55289 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDH12P55289 U3.12-201ENST00000364498 214 ntBASIC3.18□□□□□ -1.9
CDH12P55289 RNU6-715P-201ENST00000365204 103 ntBASIC3.18□□□□□ -1.9
CDH12P55289 SNORA4.3-201ENST00000365564 137 ntBASIC3.18□□□□□ -1.9
CDH12P55289 Y_RNA.373-201ENST00000365600 103 ntBASIC3.18□□□□□ -1.9
CDH12P55289 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CDH12P55289 SNORA32.2-201ENST00000384049 122 ntBASIC3.18□□□□□ -1.9
CDH12P55289 SNORA16.2-201ENST00000390991 127 ntBASIC3.18□□□□□ -1.9
CDH12P55289 RNU6-1009P-201ENST00000390996 107 ntBASIC3.18□□□□□ -1.9
CDH12P55289 SNORD70.1-201ENST00000391007 85 ntBASIC3.18□□□□□ -1.9
CDH12P55289 RAP1BP3-201ENST00000407180 549 ntBASIC3.18□□□□□ -1.9
CDH12P55289 CRYBB2P1-203ENST00000415709 538 ntBASIC3.18□□□□□ -1.9
CDH12P55289 YPEL5P1-201ENST00000419731 367 ntBASIC3.18□□□□□ -1.9
CDH12P55289 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.18□□□□□ -1.9
CDH12P55289 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH12P55289 ZNF863P-201ENST00000426746 417 ntBASIC3.18□□□□□ -1.9
CDH12P55289 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH12P55289 TAAR7P-201ENST00000436141 242 ntBASIC3.18□□□□□ -1.9
CDH12P55289 NOTCH2P1-201ENST00000443481 624 ntBASIC3.18□□□□□ -1.9
CDH12P55289 AC007547.1-201ENST00000462177 490 ntBASIC3.18□□□□□ -1.9
CDH12P55289 AC012181.1-201ENST00000479895 423 ntBASIC3.18□□□□□ -1.9
CDH12P55289 AC083904.1-201ENST00000487828 231 ntBASIC3.18□□□□□ -1.9
CDH12P55289 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH12P55289 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.18□□□□□ -1.9
CDH12P55289 RNA5SP468-201ENST00000516782 93 ntBASIC3.18□□□□□ -1.9
CDH12P55289 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.18□□□□□ -1.9
CDH12P55289 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.18□□□□□ -1.9
CDH12P55289 RAB11AP2-201ENST00000545905 639 ntBASIC3.18□□□□□ -1.9
CDH12P55289 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH12P55289 OR11H5P-201ENST00000554039 926 ntBASIC3.18□□□□□ -1.9
CDH12P55289 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH12P55289 AC091135.1-201ENST00000585943 307 ntBASIC3.18□□□□□ -1.9
CDH12P55289 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.18□□□□□ -1.9
CDH12P55289 BNIP3P25-201ENST00000596023 559 ntBASIC3.18□□□□□ -1.9
CDH12P55289 CTHRC1P1-201ENST00000605383 469 ntBASIC3.18□□□□□ -1.9
CDH12P55289 AC006023.2-201ENST00000609916 167 ntBASIC3.18□□□□□ -1.9
CDH12P55289 DUSP12P1-201ENST00000612874 516 ntBASIC3.18□□□□□ -1.9
CDH12P55289 MTND1P37-201ENST00000636562 264 ntBASIC3.18□□□□□ -1.9
CDH12P55289 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CDH12P55289 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CDH12P55289 ZNF285B-201ENST00000561698 1767 ntBASIC3.17□□□□□ -1.9
CDH12P55289 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDH12P55289 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDH12P55289 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDH12P55289 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CDH12P55289 MFSD8-233ENST00000641482 4860 ntBASIC3.17□□□□□ -1.9
CDH12P55289 RNU6-50P-201ENST00000362356 103 ntBASIC3.17□□□□□ -1.9
CDH12P55289 Z99755.1-201ENST00000414048 380 ntBASIC3.17□□□□□ -1.9
CDH12P55289 AC007390.1-201ENST00000415722 356 ntBASIC3.17□□□□□ -1.9
CDH12P55289 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH12P55289 UBE2D3P2-201ENST00000424409 445 ntBASIC3.17□□□□□ -1.9
CDH12P55289 MTCO3P46-201ENST00000425787 232 ntBASIC3.17□□□□□ -1.9
CDH12P55289 AC007919.1-201ENST00000429380 217 ntBASIC3.17□□□□□ -1.9
CDH12P55289 AL591704.1-201ENST00000432574 275 ntBASIC3.17□□□□□ -1.9
CDH12P55289 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.17□□□□□ -1.9
CDH12P55289 PRPS1P1-201ENST00000445305 876 ntBASIC3.17□□□□□ -1.9
CDH12P55289 RPL7P12-201ENST00000446719 750 ntBASIC3.17□□□□□ -1.9
CDH12P55289 AC008264.1-201ENST00000447612 367 ntBASIC3.17□□□□□ -1.9
CDH12P55289 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.17□□□□□ -1.9
CDH12P55289 Y_RNA.654-201ENST00000497848 106 ntBASIC3.17□□□□□ -1.9
CDH12P55289 FAM206BP-201ENST00000510179 541 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms