Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RPL36AP53-201ENST00000432891 316 ntBASIC2.18□□□□□ -2.06
CDH6P55285 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.18□□□□□ -2.06
CDH6P55285 MTCO2P20-201ENST00000437339 673 ntBASIC2.18□□□□□ -2.06
CDH6P55285 FAM103A2P-201ENST00000444122 354 ntBASIC2.18□□□□□ -2.06
CDH6P55285 GTF2IP9-201ENST00000502460 301 ntBASIC2.18□□□□□ -2.06
CDH6P55285 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CDH6P55285 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.18□□□□□ -2.06
CDH6P55285 AC008549.1-201ENST00000512900 643 ntBASIC2.18□□□□□ -2.06
CDH6P55285 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.18□□□□□ -2.06
CDH6P55285 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CDH6P55285 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.18□□□□□ -2.06
CDH6P55285 AC006199.1-201ENST00000548728 219 ntBASIC2.18□□□□□ -2.06
CDH6P55285 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.18□□□□□ -2.06
CDH6P55285 MIR3167-201ENST00000579623 85 ntBASIC2.18□□□□□ -2.06
CDH6P55285 AC005261.5-201ENST00000596280 355 ntBASIC2.18□□□□□ -2.06
CDH6P55285 AL121917.1-203ENST00000605534 577 ntBASIC2.18□□□□□ -2.06
CDH6P55285 AC080013.3-201ENST00000606839 578 ntBASIC2.18□□□□□ -2.06
CDH6P55285 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.18□□□□□ -2.06
CDH6P55285 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.18□□□□□ -2.06
CDH6P55285 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
CDH6P55285 AC011939.3-201ENST00000613686 466 ntBASIC2.18□□□□□ -2.06
CDH6P55285 AC009090.3-201ENST00000616553 565 ntBASIC2.18□□□□□ -2.06
CDH6P55285 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.18□□□□□ -2.06
CDH6P55285 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
CDH6P55285 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.17□□□□□ -2.06
CDH6P55285 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.17□□□□□ -2.06
CDH6P55285 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.17□□□□□ -2.06
CDH6P55285 SNORA3A-201ENST00000364113 130 ntBASIC2.17□□□□□ -2.06
CDH6P55285 RSL24D1P4-201ENST00000400938 484 ntBASIC2.17□□□□□ -2.06
CDH6P55285 SNORA3.2-201ENST00000408221 125 ntBASIC2.17□□□□□ -2.06
CDH6P55285 NPM1P11-201ENST00000417106 855 ntBASIC2.17□□□□□ -2.06
CDH6P55285 Z98742.3-201ENST00000418637 326 ntBASIC2.17□□□□□ -2.06
CDH6P55285 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.17□□□□□ -2.06
CDH6P55285 AL109913.1-201ENST00000421173 514 ntBASIC2.17□□□□□ -2.06
CDH6P55285 AL161651.1-201ENST00000440882 223 ntBASIC2.17□□□□□ -2.06
CDH6P55285 PTENP1-201ENST00000447117 1215 ntBASIC2.17□□□□□ -2.06
CDH6P55285 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
CDH6P55285 AL021397.1-201ENST00000451806 248 ntBASIC2.17□□□□□ -2.06
CDH6P55285 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.17□□□□□ -2.06
CDH6P55285 DYNLL1P5-201ENST00000467158 270 ntBASIC2.17□□□□□ -2.06
CDH6P55285 RPL7P18-201ENST00000478965 734 ntBASIC2.17□□□□□ -2.06
CDH6P55285 RPS27P21-201ENST00000486977 252 ntBASIC2.17□□□□□ -2.06
CDH6P55285 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.17□□□□□ -2.06
CDH6P55285 AC134050.1-201ENST00000495088 933 ntBASIC2.17□□□□□ -2.06
CDH6P55285 AC106872.3-201ENST00000495104 446 ntBASIC2.17□□□□□ -2.06
CDH6P55285 MTCYBP43-201ENST00000513621 740 ntBASIC2.17□□□□□ -2.06
CDH6P55285 MIR892C-201ENST00000516410 77 ntBASIC2.17□□□□□ -2.06
CDH6P55285 RNU6-703P-201ENST00000516946 107 ntBASIC2.17□□□□□ -2.06
CDH6P55285 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
CDH6P55285 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.17□□□□□ -2.06
CDH6P55285 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.17□□□□□ -2.06
CDH6P55285 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.17□□□□□ -2.06
CDH6P55285 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.17□□□□□ -2.06
CDH6P55285 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.17□□□□□ -2.06
CDH6P55285 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.17□□□□□ -2.06
CDH6P55285 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.17□□□□□ -2.06
CDH6P55285 MIR4509-3-201ENST00000578671 94 ntBASIC2.17□□□□□ -2.06
CDH6P55285 MIR4509-2-201ENST00000583920 94 ntBASIC2.17□□□□□ -2.06
CDH6P55285 MIR4765-201ENST00000585007 77 ntBASIC2.17□□□□□ -2.06
CDH6P55285 AC091057.3-201ENST00000602684 733 ntBASIC2.17□□□□□ -2.06
CDH6P55285 AC091152.3-201ENST00000604227 325 ntBASIC2.17□□□□□ -2.06
CDH6P55285 RNU4-5P-201ENST00000607255 135 ntBASIC2.17□□□□□ -2.06
CDH6P55285 MIR4509-1-201ENST00000618224 94 ntBASIC2.17□□□□□ -2.06
CDH6P55285 AC010378.1-201ENST00000619270 362 ntBASIC2.17□□□□□ -2.06
CDH6P55285 AL445984.1-201ENST00000637834 659 ntBASIC2.17□□□□□ -2.06
CDH6P55285 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CDH6P55285 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CDH6P55285 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CDH6P55285 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CDH6P55285 AP000776.1-201ENST00000530032 1663 ntBASIC2.16□□□□□ -2.06
CDH6P55285 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CDH6P55285 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CDH6P55285 UBE2L2-201ENST00000254302 429 ntBASIC2.16□□□□□ -2.06
CDH6P55285 RNU6-658P-201ENST00000384606 106 ntBASIC2.16□□□□□ -2.06
CDH6P55285 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CDH6P55285 MIR1305-201ENST00000408300 86 ntBASIC2.16□□□□□ -2.06
CDH6P55285 U6atac.2-201ENST00000408644 118 ntBASIC2.16□□□□□ -2.06
CDH6P55285 RN7SKP223-201ENST00000410582 62 ntBASIC2.16□□□□□ -2.06
CDH6P55285 RN7SKP192-201ENST00000411291 327 ntBASIC2.16□□□□□ -2.06
CDH6P55285 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
CDH6P55285 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.16□□□□□ -2.06
CDH6P55285 BX276092.3-201ENST00000424182 230 ntBASIC2.16□□□□□ -2.06
CDH6P55285 AC092648.1-201ENST00000425870 423 ntBASIC2.16□□□□□ -2.06
CDH6P55285 AC104651.1-201ENST00000427559 735 ntBASIC2.16□□□□□ -2.06
CDH6P55285 RPL30P4-201ENST00000429309 333 ntBASIC2.16□□□□□ -2.06
CDH6P55285 WARS2P1-201ENST00000429678 537 ntBASIC2.16□□□□□ -2.06
CDH6P55285 HMGB1P27-201ENST00000431429 603 ntBASIC2.16□□□□□ -2.06
CDH6P55285 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH6P55285 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.16□□□□□ -2.06
CDH6P55285 FABP5P14-201ENST00000437273 393 ntBASIC2.16□□□□□ -2.06
CDH6P55285 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CDH6P55285 RPL23AP7-203ENST00000449021 469 ntBASIC2.16□□□□□ -2.06
CDH6P55285 AL353705.4-201ENST00000449661 238 ntBASIC2.16□□□□□ -2.06
CDH6P55285 PSPHP1-201ENST00000450062 261 ntBASIC2.16□□□□□ -2.06
CDH6P55285 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH6P55285 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH6P55285 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH6P55285 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH6P55285 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH6P55285 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms