Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC055855.1-201ENST00000489563 579 ntBASIC2.29□□□□□ -2.04
CDH4P55283 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CDH4P55283 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CDH4P55283 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.29□□□□□ -2.04
CDH4P55283 AP000907.2-201ENST00000530827 353 ntBASIC2.29□□□□□ -2.04
CDH4P55283 AC010186.2-204ENST00000537668 439 ntBASIC2.29□□□□□ -2.04
CDH4P55283 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.29□□□□□ -2.04
CDH4P55283 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.29□□□□□ -2.04
CDH4P55283 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.29□□□□□ -2.04
CDH4P55283 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.29□□□□□ -2.04
CDH4P55283 AC021739.1-201ENST00000559631 174 ntBASIC2.29□□□□□ -2.04
CDH4P55283 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.29□□□□□ -2.04
CDH4P55283 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.29□□□□□ -2.04
CDH4P55283 MIR1273D-201ENST00000577266 86 ntBASIC2.29□□□□□ -2.04
CDH4P55283 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.29□□□□□ -2.04
CDH4P55283 VN1R82P-201ENST00000601481 356 ntBASIC2.29□□□□□ -2.04
CDH4P55283 AL391001.1-201ENST00000602747 715 ntBASIC2.29□□□□□ -2.04
CDH4P55283 AC008121.1-201ENST00000603244 268 ntBASIC2.29□□□□□ -2.04
CDH4P55283 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CDH4P55283 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.29□□□□□ -2.04
CDH4P55283 AC005332.10-201ENST00000612725 619 ntBASIC2.29□□□□□ -2.04
CDH4P55283 AL449363.1-201ENST00000617815 186 ntBASIC2.29□□□□□ -2.04
CDH4P55283 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
CDH4P55283 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.28□□□□□ -2.04
CDH4P55283 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.28□□□□□ -2.04
CDH4P55283 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CDH4P55283 RNU1-52P-201ENST00000384190 164 ntBASIC2.28□□□□□ -2.04
CDH4P55283 AL021407.1-201ENST00000404531 386 ntBASIC2.28□□□□□ -2.04
CDH4P55283 RNU6-757P-201ENST00000410334 100 ntBASIC2.28□□□□□ -2.04
CDH4P55283 RN7SKP192-201ENST00000411291 327 ntBASIC2.28□□□□□ -2.04
CDH4P55283 PIGPP2-201ENST00000411569 458 ntBASIC2.28□□□□□ -2.04
CDH4P55283 AL109913.1-201ENST00000421173 514 ntBASIC2.28□□□□□ -2.04
CDH4P55283 AC084290.1-201ENST00000434995 374 ntBASIC2.28□□□□□ -2.04
CDH4P55283 AL139109.1-201ENST00000455491 297 ntBASIC2.28□□□□□ -2.04
CDH4P55283 TRBV12-1-201ENST00000479785 344 ntBASIC2.28□□□□□ -2.04
CDH4P55283 AC107222.1-201ENST00000510899 637 ntBASIC2.28□□□□□ -2.04
CDH4P55283 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.28□□□□□ -2.04
CDH4P55283 RNA5SP200-201ENST00000516360 103 ntBASIC2.28□□□□□ -2.04
CDH4P55283 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.28□□□□□ -2.04
CDH4P55283 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.28□□□□□ -2.04
CDH4P55283 AC013828.2-201ENST00000532487 235 ntBASIC2.28□□□□□ -2.04
CDH4P55283 MRPS36P5-201ENST00000551909 298 ntBASIC2.28□□□□□ -2.04
CDH4P55283 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.28□□□□□ -2.04
CDH4P55283 AL049838.1-201ENST00000563647 981 ntBASIC2.28□□□□□ -2.04
CDH4P55283 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.28□□□□□ -2.04
CDH4P55283 MTCO2P2-201ENST00000591258 225 ntBASIC2.28□□□□□ -2.04
CDH4P55283 AL355598.1-201ENST00000604169 202 ntBASIC2.28□□□□□ -2.04
CDH4P55283 AC013412.1-201ENST00000610687 192 ntBASIC2.28□□□□□ -2.04
CDH4P55283 AC009831.4-201ENST00000620744 325 ntBASIC2.28□□□□□ -2.04
CDH4P55283 MIR6873-201ENST00000622788 63 ntBASIC2.28□□□□□ -2.04
CDH4P55283 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.28□□□□□ -2.04
CDH4P55283 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.28□□□□□ -2.04
CDH4P55283 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.28□□□□□ -2.05
CDH4P55283 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.05
CDH4P55283 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.27□□□□□ -2.05
CDH4P55283 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CDH4P55283 MTND4P35-201ENST00000604257 1375 ntBASIC2.27□□□□□ -2.05
CDH4P55283 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.27□□□□□ -2.05
CDH4P55283 SNORA6-201ENST00000384033 151 ntBASIC2.27□□□□□ -2.05
CDH4P55283 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.27□□□□□ -2.05
CDH4P55283 RN7SKP223-201ENST00000410582 62 ntBASIC2.27□□□□□ -2.05
CDH4P55283 RNU6-920P-201ENST00000410926 92 ntBASIC2.27□□□□□ -2.05
CDH4P55283 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.27□□□□□ -2.05
CDH4P55283 VPS26BP1-201ENST00000417155 755 ntBASIC2.27□□□□□ -2.05
CDH4P55283 AL139415.2-201ENST00000431968 163 ntBASIC2.27□□□□□ -2.05
CDH4P55283 UBE2D3P1-201ENST00000436669 444 ntBASIC2.27□□□□□ -2.05
CDH4P55283 AL161651.1-201ENST00000440882 223 ntBASIC2.27□□□□□ -2.05
CDH4P55283 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CDH4P55283 HMGN2P10-201ENST00000448085 265 ntBASIC2.27□□□□□ -2.05
CDH4P55283 AL353705.4-201ENST00000449661 238 ntBASIC2.27□□□□□ -2.05
CDH4P55283 FABP5P15-201ENST00000453566 214 ntBASIC2.27□□□□□ -2.05
CDH4P55283 ANKRD26P4-201ENST00000455755 950 ntBASIC2.27□□□□□ -2.05
CDH4P55283 DUXAP8-207ENST00000456786 622 ntBASIC2.27□□□□□ -2.05
CDH4P55283 ANXA2P1-201ENST00000505539 926 ntBASIC2.27□□□□□ -2.05
CDH4P55283 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.27□□□□□ -2.05
CDH4P55283 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.27□□□□□ -2.05
CDH4P55283 SCARNA3-201ENST00000517097 143 ntBASIC2.27□□□□□ -2.05
CDH4P55283 DEFB108A-201ENST00000530110 222 ntBASIC2.27□□□□□ -2.05
CDH4P55283 AC087241.2-201ENST00000535801 324 ntBASIC2.27□□□□□ -2.05
CDH4P55283 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.27□□□□□ -2.05
CDH4P55283 AC006199.1-201ENST00000548728 219 ntBASIC2.27□□□□□ -2.05
CDH4P55283 MIR5571-201ENST00000577998 113 ntBASIC2.27□□□□□ -2.05
CDH4P55283 MIR544B-201ENST00000582372 78 ntBASIC2.27□□□□□ -2.05
CDH4P55283 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.27□□□□□ -2.05
CDH4P55283 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.27□□□□□ -2.05
CDH4P55283 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.27□□□□□ -2.05
CDH4P55283 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.27□□□□□ -2.05
CDH4P55283 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.27□□□□□ -2.05
CDH4P55283 AC107294.1-201ENST00000609524 467 ntBASIC2.27□□□□□ -2.05
CDH4P55283 AC025594.3-201ENST00000613068 790 ntBASIC2.27□□□□□ -2.05
CDH4P55283 AC016597.2-201ENST00000613256 341 ntBASIC2.27□□□□□ -2.05
CDH4P55283 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.27□□□□□ -2.05
CDH4P55283 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.27□□□□□ -2.05
CDH4P55283 MIR6132-201ENST00000622083 109 ntBASIC2.27□□□□□ -2.05
CDH4P55283 AL078595.3-201ENST00000623815 1166 ntBASIC2.27□□□□□ -2.05
CDH4P55283 AC007490.1-201ENST00000624321 703 ntBASIC2.27□□□□□ -2.05
CDH4P55283 AL160394.1-201ENST00000624765 724 ntBASIC2.27□□□□□ -2.05
CDH4P55283 MIR7157-201ENST00000635801 60 ntBASIC2.27□□□□□ -2.05
CDH4P55283 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CDH4P55283 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms