Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AL365496.1-201ENST00000426885 215 ntBASIC3.33□□□□□ -1.88
NR1H2P55055 AL592045.1-201ENST00000429867 352 ntBASIC3.33□□□□□ -1.88
NR1H2P55055 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.33□□□□□ -1.88
NR1H2P55055 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.33□□□□□ -1.88
NR1H2P55055 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.33□□□□□ -1.88
NR1H2P55055 RN7SL283P-201ENST00000489055 303 ntBASIC3.33□□□□□ -1.88
NR1H2P55055 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.33□□□□□ -1.88
NR1H2P55055 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.33□□□□□ -1.88
NR1H2P55055 AC104619.4-201ENST00000510773 249 ntBASIC3.33□□□□□ -1.88
NR1H2P55055 SNORD27.1-201ENST00000516319 72 ntBASIC3.33□□□□□ -1.88
NR1H2P55055 SCARNA13-201ENST00000516672 275 ntBASIC3.33□□□□□ -1.88
NR1H2P55055 RNU6-914P-201ENST00000516749 109 ntBASIC3.33□□□□□ -1.88
NR1H2P55055 Y_RNA.704-201ENST00000516851 102 ntBASIC3.33□□□□□ -1.88
NR1H2P55055 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.33□□□□□ -1.88
NR1H2P55055 AK6P1-201ENST00000540219 478 ntBASIC3.33□□□□□ -1.88
NR1H2P55055 AL512360.1-201ENST00000555346 234 ntBASIC3.33□□□□□ -1.88
NR1H2P55055 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.33□□□□□ -1.88
NR1H2P55055 HMGB1P33-201ENST00000563485 527 ntBASIC3.33□□□□□ -1.88
NR1H2P55055 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.33□□□□□ -1.88
NR1H2P55055 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.33□□□□□ -1.88
NR1H2P55055 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.33□□□□□ -1.88
NR1H2P55055 AC005498.1-201ENST00000592125 465 ntBASIC3.33□□□□□ -1.88
NR1H2P55055 RPL23AP78-201ENST00000599928 470 ntBASIC3.33□□□□□ -1.88
NR1H2P55055 SNORA62.6-201ENST00000606322 83 ntBASIC3.33□□□□□ -1.88
NR1H2P55055 AC005609.4-201ENST00000625071 447 ntBASIC3.33□□□□□ -1.88
NR1H2P55055 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.33□□□□□ -1.88
NR1H2P55055 SNORA50A-202ENST00000629536 136 ntBASIC3.33□□□□□ -1.88
NR1H2P55055 U6.114-201ENST00000636407 96 ntBASIC3.33□□□□□ -1.88
NR1H2P55055 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NR1H2P55055 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.33□□□□□ -1.88
NR1H2P55055 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NR1H2P55055 AC103710.2-202ENST00000641454 2853 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 Y_RNA.9-201ENST00000362354 101 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 SNORA62.1-201ENST00000364287 154 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 RNU4-48P-201ENST00000365559 182 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.32□□□□□ -1.88
NR1H2P55055 SNORA9-201ENST00000384215 133 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 SNORA24.1-201ENST00000384401 135 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 Y_RNA.534-201ENST00000384599 112 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 MIR454-201ENST00000390180 115 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 SNORD115-47-201ENST00000391226 86 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 SNORA48.8-201ENST00000391324 134 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.32□□□□□ -1.88
NR1H2P55055 NDUFB4P5-201ENST00000415445 361 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 AL035423.1-201ENST00000420331 213 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.32□□□□□ -1.88
NR1H2P55055 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.32□□□□□ -1.88
NR1H2P55055 RPL7P54-201ENST00000438336 674 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.32□□□□□ -1.88
NR1H2P55055 AL357552.1-201ENST00000445254 415 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.32□□□□□ -1.88
NR1H2P55055 AL121769.1-201ENST00000469473 401 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.32□□□□□ -1.88
NR1H2P55055 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.32□□□□□ -1.88
NR1H2P55055 AC109927.2-201ENST00000506416 303 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 AL117351.2-201ENST00000513571 157 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.32□□□□□ -1.88
NR1H2P55055 RN7SKP18-201ENST00000516005 275 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 Y_RNA.693-201ENST00000516641 110 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 AC022695.1-201ENST00000522089 237 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.32□□□□□ -1.88
NR1H2P55055 OR5AQ1P-201ENST00000527596 927 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 RANP3-201ENST00000530970 276 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 OR5B19P-201ENST00000531766 928 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.32□□□□□ -1.88
NR1H2P55055 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NR1H2P55055 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NR1H2P55055 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.32□□□□□ -1.88
NR1H2P55055 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.32□□□□□ -1.88
NR1H2P55055 MIR1273C-201ENST00000578669 77 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.32□□□□□ -1.88
NR1H2P55055 AC024619.4-201ENST00000580924 316 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 MIR3922-201ENST00000585192 84 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 AP001330.5-201ENST00000607176 411 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 AC012409.4-201ENST00000612923 249 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 AC130324.3-201ENST00000614165 542 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 Z99571.1-201ENST00000636677 394 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 U2.21-201ENST00000637295 81 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.32□□□□□ -1.88
NR1H2P55055 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NR1H2P55055 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
NR1H2P55055 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NR1H2P55055 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.31□□□□□ -1.88
NR1H2P55055 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.31□□□□□ -1.88
NR1H2P55055 AC032011.1-201ENST00000611703 1549 ntBASIC3.31□□□□□ -1.88
NR1H2P55055 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
NR1H2P55055 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NR1H2P55055 MTND4P35-201ENST00000604257 1375 ntBASIC3.31□□□□□ -1.88
NR1H2P55055 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NR1H2P55055 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NR1H2P55055 Y_RNA.481-201ENST00000384373 102 ntBASIC3.31□□□□□ -1.88
NR1H2P55055 MIR767-201ENST00000390228 109 ntBASIC3.31□□□□□ -1.88
NR1H2P55055 AL591416.1-201ENST00000404015 867 ntBASIC3.31□□□□□ -1.88
NR1H2P55055 BTF3P7-201ENST00000407097 488 ntBASIC3.31□□□□□ -1.88
NR1H2P55055 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.31□□□□□ -1.88
NR1H2P55055 OR51A5P-201ENST00000415429 942 ntBASIC3.31□□□□□ -1.88
NR1H2P55055 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.31□□□□□ -1.88
NR1H2P55055 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.31□□□□□ -1.88
NR1H2P55055 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.31□□□□□ -1.88
NR1H2P55055 CYCSP32-201ENST00000440548 321 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms