Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 VN1R108P-201ENST00000431580 830 ntBASIC2.69□□□□□ -1.98
HMGCS2P54868 AC010153.1-201ENST00000432862 727 ntBASIC2.69□□□□□ -1.98
HMGCS2P54868 AL022238.1-201ENST00000442557 355 ntBASIC2.69□□□□□ -1.98
HMGCS2P54868 MTCO1P19-201ENST00000443487 500 ntBASIC2.69□□□□□ -1.98
HMGCS2P54868 USP9YP29-201ENST00000445112 563 ntBASIC2.69□□□□□ -1.98
HMGCS2P54868 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.69□□□□□ -1.98
HMGCS2P54868 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.69□□□□□ -1.98
HMGCS2P54868 AC022447.1-201ENST00000515358 464 ntBASIC2.69□□□□□ -1.98
HMGCS2P54868 SNORA31.26-201ENST00000517250 137 ntBASIC2.69□□□□□ -1.98
HMGCS2P54868 AC022616.6-201ENST00000520479 119 ntBASIC2.69□□□□□ -1.98
HMGCS2P54868 AP003181.2-201ENST00000528941 181 ntBASIC2.69□□□□□ -1.98
HMGCS2P54868 AP000907.2-201ENST00000530827 353 ntBASIC2.69□□□□□ -1.98
HMGCS2P54868 AP000867.2-201ENST00000532468 320 ntBASIC2.69□□□□□ -1.98
HMGCS2P54868 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.69□□□□□ -1.98
HMGCS2P54868 MIR5007-201ENST00000583098 95 ntBASIC2.69□□□□□ -1.98
HMGCS2P54868 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.69□□□□□ -1.98
HMGCS2P54868 NBR2-204ENST00000587322 63 ntBASIC2.69□□□□□ -1.98
HMGCS2P54868 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.69□□□□□ -1.98
HMGCS2P54868 RPL23AP78-201ENST00000599928 470 ntBASIC2.69□□□□□ -1.98
HMGCS2P54868 AC025754.2-201ENST00000606491 432 ntBASIC2.69□□□□□ -1.98
HMGCS2P54868 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.69□□□□□ -1.98
HMGCS2P54868 AC004067.1-201ENST00000608733 700 ntBASIC2.69□□□□□ -1.98
HMGCS2P54868 AC093838.1-201ENST00000613014 469 ntBASIC2.69□□□□□ -1.98
HMGCS2P54868 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.69□□□□□ -1.98
HMGCS2P54868 AC019226.1-201ENST00000625666 515 ntBASIC2.69□□□□□ -1.98
HMGCS2P54868 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
HMGCS2P54868 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
HMGCS2P54868 TPTE2P4-201ENST00000258589 1605 ntBASIC2.68□□□□□ -1.98
HMGCS2P54868 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.68□□□□□ -1.98
HMGCS2P54868 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
HMGCS2P54868 AC099654.7-201ENST00000635788 2127 ntBASIC2.68□□□□□ -1.98
HMGCS2P54868 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
HMGCS2P54868 Y_RNA.553-201ENST00000384670 102 ntBASIC2.68□□□□□ -1.98
HMGCS2P54868 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
HMGCS2P54868 Y_RNA.598-201ENST00000410480 95 ntBASIC2.68□□□□□ -1.98
HMGCS2P54868 AC016907.1-201ENST00000419483 435 ntBASIC2.68□□□□□ -1.98
HMGCS2P54868 AC093151.1-201ENST00000427711 313 ntBASIC2.68□□□□□ -1.98
HMGCS2P54868 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.68□□□□□ -1.98
HMGCS2P54868 RPS15AP28-201ENST00000435088 386 ntBASIC2.68□□□□□ -1.98
HMGCS2P54868 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.68□□□□□ -1.98
HMGCS2P54868 RPL23AP58-201ENST00000440453 469 ntBASIC2.68□□□□□ -1.98
HMGCS2P54868 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.68□□□□□ -1.98
HMGCS2P54868 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.68□□□□□ -1.98
HMGCS2P54868 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.68□□□□□ -1.98
HMGCS2P54868 GAPDHP27-201ENST00000447427 1020 ntBASIC2.68□□□□□ -1.98
HMGCS2P54868 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HMGCS2P54868 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.68□□□□□ -1.98
HMGCS2P54868 MTND4LP3-201ENST00000468320 276 ntBASIC2.68□□□□□ -1.98
HMGCS2P54868 AC010424.1-201ENST00000506336 297 ntBASIC2.68□□□□□ -1.98
HMGCS2P54868 AP003467.2-201ENST00000520175 319 ntBASIC2.68□□□□□ -1.98
HMGCS2P54868 MTCYBP20-201ENST00000524239 1129 ntBASIC2.68□□□□□ -1.98
HMGCS2P54868 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.68□□□□□ -1.98
HMGCS2P54868 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.68□□□□□ -1.98
HMGCS2P54868 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.68□□□□□ -1.98
HMGCS2P54868 AC015712.3-201ENST00000559380 164 ntBASIC2.68□□□□□ -1.98
HMGCS2P54868 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.68□□□□□ -1.98
HMGCS2P54868 MIR3609-201ENST00000582661 80 ntBASIC2.68□□□□□ -1.98
HMGCS2P54868 AC009977.1-201ENST00000586015 570 ntBASIC2.68□□□□□ -1.98
HMGCS2P54868 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.68□□□□□ -1.98
HMGCS2P54868 HMGN1P30-201ENST00000589286 268 ntBASIC2.68□□□□□ -1.98
HMGCS2P54868 RSL24D1P11-201ENST00000591045 491 ntBASIC2.68□□□□□ -1.98
HMGCS2P54868 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.68□□□□□ -1.98
HMGCS2P54868 AC068790.3-201ENST00000602988 553 ntBASIC2.68□□□□□ -1.98
HMGCS2P54868 HSPE1P7-201ENST00000604681 321 ntBASIC2.68□□□□□ -1.98
HMGCS2P54868 AC007038.2-201ENST00000608095 740 ntBASIC2.68□□□□□ -1.98
HMGCS2P54868 AP000254.1-201ENST00000609934 520 ntBASIC2.68□□□□□ -1.98
HMGCS2P54868 AC009509.4-201ENST00000619202 509 ntBASIC2.68□□□□□ -1.98
HMGCS2P54868 AC091953.2-201ENST00000623979 160 ntBASIC2.68□□□□□ -1.98
HMGCS2P54868 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.68□□□□□ -1.98
HMGCS2P54868 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
HMGCS2P54868 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.68□□□□□ -1.98
HMGCS2P54868 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
HMGCS2P54868 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HMGCS2P54868 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.67□□□□□ -1.98
HMGCS2P54868 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HMGCS2P54868 RNU4-1-201ENST00000363925 141 ntBASIC2.67□□□□□ -1.98
HMGCS2P54868 SNORA75-201ENST00000384158 137 ntBASIC2.67□□□□□ -1.98
HMGCS2P54868 RN7SKP32-201ENST00000410167 303 ntBASIC2.67□□□□□ -1.98
HMGCS2P54868 RNU6-248P-201ENST00000410720 107 ntBASIC2.67□□□□□ -1.98
HMGCS2P54868 RNA5SP344-201ENST00000411081 104 ntBASIC2.67□□□□□ -1.98
HMGCS2P54868 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.67□□□□□ -1.98
HMGCS2P54868 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.67□□□□□ -1.98
HMGCS2P54868 AC104332.2-201ENST00000429959 156 ntBASIC2.67□□□□□ -1.98
HMGCS2P54868 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.67□□□□□ -1.98
HMGCS2P54868 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.67□□□□□ -1.98
HMGCS2P54868 TIMM9P1-201ENST00000436122 256 ntBASIC2.67□□□□□ -1.98
HMGCS2P54868 AC018634.1-201ENST00000437554 401 ntBASIC2.67□□□□□ -1.98
HMGCS2P54868 RPL22P17-201ENST00000438729 315 ntBASIC2.67□□□□□ -1.98
HMGCS2P54868 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.67□□□□□ -1.98
HMGCS2P54868 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.67□□□□□ -1.98
HMGCS2P54868 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.67□□□□□ -1.98
HMGCS2P54868 MTCO2P18-201ENST00000457151 658 ntBASIC2.67□□□□□ -1.98
HMGCS2P54868 SNORD42A-201ENST00000459584 64 ntBASIC2.67□□□□□ -1.98
HMGCS2P54868 AL049714.1-201ENST00000466686 347 ntBASIC2.67□□□□□ -1.98
HMGCS2P54868 RPS15AP36-201ENST00000492022 382 ntBASIC2.67□□□□□ -1.98
HMGCS2P54868 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.67□□□□□ -1.98
HMGCS2P54868 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.67□□□□□ -1.98
HMGCS2P54868 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.67□□□□□ -1.98
HMGCS2P54868 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.67□□□□□ -1.98
HMGCS2P54868 SNRPGP18-201ENST00000553000 214 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms