Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AL845331.3-202ENST00000562856 261 ntBASIC3.3□□□□□ -1.88
CLCN3P51790 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.3□□□□□ -1.88
CLCN3P51790 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.3□□□□□ -1.88
CLCN3P51790 AC013553.2-201ENST00000604244 589 ntBASIC3.3□□□□□ -1.88
CLCN3P51790 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.3□□□□□ -1.88
CLCN3P51790 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLCN3P51790 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.3□□□□□ -1.88
CLCN3P51790 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CLCN3P51790 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLCN3P51790 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.3□□□□□ -1.88
CLCN3P51790 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.29□□□□□ -1.88
CLCN3P51790 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLCN3P51790 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLCN3P51790 SNORD56.3-201ENST00000363507 71 ntBASIC3.29□□□□□ -1.88
CLCN3P51790 RNU6-1097P-201ENST00000363586 107 ntBASIC3.29□□□□□ -1.88
CLCN3P51790 RNU6-7-201ENST00000364784 107 ntBASIC3.29□□□□□ -1.88
CLCN3P51790 RNU6-8-201ENST00000365467 107 ntBASIC3.29□□□□□ -1.88
CLCN3P51790 RNU6-108P-201ENST00000365558 107 ntBASIC3.29□□□□□ -1.88
CLCN3P51790 SNORA1.3-201ENST00000384676 136 ntBASIC3.29□□□□□ -1.88
CLCN3P51790 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.29□□□□□ -1.88
CLCN3P51790 RPL32P35-201ENST00000415214 394 ntBASIC3.29□□□□□ -1.88
CLCN3P51790 Z85995.1-201ENST00000415547 335 ntBASIC3.29□□□□□ -1.88
CLCN3P51790 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.29□□□□□ -1.88
CLCN3P51790 AL353193.1-201ENST00000421444 268 ntBASIC3.29□□□□□ -1.88
CLCN3P51790 TMEM167AP1-201ENST00000423409 219 ntBASIC3.29□□□□□ -1.88
CLCN3P51790 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.29□□□□□ -1.88
CLCN3P51790 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.29□□□□□ -1.88
CLCN3P51790 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.29□□□□□ -1.88
CLCN3P51790 AL353572.1-201ENST00000442490 417 ntBASIC3.29□□□□□ -1.88
CLCN3P51790 SNRPGP6-201ENST00000451124 220 ntBASIC3.29□□□□□ -1.88
CLCN3P51790 RPL23AP62-201ENST00000463396 453 ntBASIC3.29□□□□□ -1.88
CLCN3P51790 RN7SL442P-201ENST00000473804 320 ntBASIC3.29□□□□□ -1.88
CLCN3P51790 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.29□□□□□ -1.88
CLCN3P51790 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.29□□□□□ -1.88
CLCN3P51790 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.29□□□□□ -1.88
CLCN3P51790 SNORA64.4-201ENST00000516632 81 ntBASIC3.29□□□□□ -1.88
CLCN3P51790 Y_RNA.693-201ENST00000516641 110 ntBASIC3.29□□□□□ -1.88
CLCN3P51790 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.29□□□□□ -1.88
CLCN3P51790 AC090136.1-201ENST00000520009 240 ntBASIC3.29□□□□□ -1.88
CLCN3P51790 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLCN3P51790 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLCN3P51790 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.29□□□□□ -1.88
CLCN3P51790 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.29□□□□□ -1.88
CLCN3P51790 AC174048.1-201ENST00000603389 144 ntBASIC3.29□□□□□ -1.88
CLCN3P51790 MIR98-201ENST00000606724 119 ntBASIC3.29□□□□□ -1.88
CLCN3P51790 AP001330.5-201ENST00000607176 411 ntBASIC3.29□□□□□ -1.88
CLCN3P51790 U6.42-201ENST00000618440 107 ntBASIC3.29□□□□□ -1.88
CLCN3P51790 DUXAP9-208ENST00000622815 614 ntBASIC3.29□□□□□ -1.88
CLCN3P51790 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLCN3P51790 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLCN3P51790 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.29□□□□□ -1.88
CLCN3P51790 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLCN3P51790 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.28□□□□□ -1.88
CLCN3P51790 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
CLCN3P51790 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLCN3P51790 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.28□□□□□ -1.88
CLCN3P51790 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
CLCN3P51790 MIR558-201ENST00000384920 94 ntBASIC3.28□□□□□ -1.88
CLCN3P51790 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLCN3P51790 NDUFS5P1-201ENST00000405668 289 ntBASIC3.28□□□□□ -1.88
CLCN3P51790 AL590002.1-201ENST00000406554 418 ntBASIC3.28□□□□□ -1.88
CLCN3P51790 FAT1P1-201ENST00000406588 507 ntBASIC3.28□□□□□ -1.88
CLCN3P51790 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.28□□□□□ -1.88
CLCN3P51790 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLCN3P51790 ARF4P2-201ENST00000430209 526 ntBASIC3.28□□□□□ -1.88
CLCN3P51790 FCF1P1-201ENST00000432690 571 ntBASIC3.28□□□□□ -1.88
CLCN3P51790 HMGB1P31-201ENST00000437242 427 ntBASIC3.28□□□□□ -1.88
CLCN3P51790 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.28□□□□□ -1.88
CLCN3P51790 AL135938.1-201ENST00000443141 297 ntBASIC3.28□□□□□ -1.88
CLCN3P51790 AC079781.2-201ENST00000446424 169 ntBASIC3.28□□□□□ -1.88
CLCN3P51790 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.28□□□□□ -1.88
CLCN3P51790 AC078785.3-201ENST00000476607 425 ntBASIC3.28□□□□□ -1.88
CLCN3P51790 PRDX4P1-201ENST00000507189 574 ntBASIC3.28□□□□□ -1.88
CLCN3P51790 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.28□□□□□ -1.88
CLCN3P51790 SCGB1D5P-201ENST00000515134 247 ntBASIC3.28□□□□□ -1.88
CLCN3P51790 RNU6-1282P-201ENST00000516735 96 ntBASIC3.28□□□□□ -1.88
CLCN3P51790 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.28□□□□□ -1.88
CLCN3P51790 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.28□□□□□ -1.88
CLCN3P51790 AC090572.1-201ENST00000519251 160 ntBASIC3.28□□□□□ -1.88
CLCN3P51790 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.28□□□□□ -1.88
CLCN3P51790 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.28□□□□□ -1.88
CLCN3P51790 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.28□□□□□ -1.88
CLCN3P51790 AL512310.1-201ENST00000548639 172 ntBASIC3.28□□□□□ -1.88
CLCN3P51790 GLUD1P4-201ENST00000590914 418 ntBASIC3.28□□□□□ -1.88
CLCN3P51790 AC002545.1-201ENST00000592511 181 ntBASIC3.28□□□□□ -1.88
CLCN3P51790 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.28□□□□□ -1.88
CLCN3P51790 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.28□□□□□ -1.88
CLCN3P51790 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.28□□□□□ -1.88
CLCN3P51790 MIR6852-201ENST00000621699 66 ntBASIC3.28□□□□□ -1.88
CLCN3P51790 MIR1321-201ENST00000637766 79 ntBASIC3.28□□□□□ -1.88
CLCN3P51790 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.28□□□□□ -1.88
CLCN3P51790 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLCN3P51790 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLCN3P51790 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLCN3P51790 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLCN3P51790 AC022336.2-201ENST00000568966 2538 ntBASIC3.27□□□□□ -1.89
CLCN3P51790 RNU6-805P-201ENST00000365643 106 ntBASIC3.27□□□□□ -1.89
CLCN3P51790 RNU6-817P-201ENST00000391083 104 ntBASIC3.27□□□□□ -1.89
CLCN3P51790 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.27□□□□□ -1.89
CLCN3P51790 RPS4XP8-201ENST00000402039 771 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms