Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 RNU6-87P-201ENST00000607561 108 ntBASIC3.05□□□□□ -1.92
CLK1P49759 AP001596.2-201ENST00000608410 312 ntBASIC3.05□□□□□ -1.92
CLK1P49759 AL355472.4-201ENST00000610233 626 ntBASIC3.05□□□□□ -1.92
CLK1P49759 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
CLK1P49759 SNORD39.4-201ENST00000620099 78 ntBASIC3.05□□□□□ -1.92
CLK1P49759 AC012150.2-201ENST00000621300 544 ntBASIC3.05□□□□□ -1.92
CLK1P49759 MIR7515-201ENST00000637837 67 ntBASIC3.05□□□□□ -1.92
CLK1P49759 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.05□□□□□ -1.92
CLK1P49759 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CLK1P49759 AC108206.1-201ENST00000570186 4159 ntBASIC3.04□□□□□ -1.92
CLK1P49759 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CLK1P49759 AC092125.1-201ENST00000562568 1995 ntBASIC3.04□□□□□ -1.92
CLK1P49759 SNORA51.4-201ENST00000364993 124 ntBASIC3.04□□□□□ -1.92
CLK1P49759 AL109755.1-201ENST00000401791 649 ntBASIC3.04□□□□□ -1.92
CLK1P49759 AL356421.1-201ENST00000403255 413 ntBASIC3.04□□□□□ -1.92
CLK1P49759 TXNP7-201ENST00000406296 293 ntBASIC3.04□□□□□ -1.92
CLK1P49759 MIR1277-201ENST00000408536 78 ntBASIC3.04□□□□□ -1.92
CLK1P49759 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CLK1P49759 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
CLK1P49759 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.04□□□□□ -1.92
CLK1P49759 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.04□□□□□ -1.92
CLK1P49759 MTCO2P19-201ENST00000427513 598 ntBASIC3.04□□□□□ -1.92
CLK1P49759 UBE2V1P13-201ENST00000436983 439 ntBASIC3.04□□□□□ -1.92
CLK1P49759 AC112653.1-201ENST00000443851 386 ntBASIC3.04□□□□□ -1.92
CLK1P49759 AC115115.1-201ENST00000449927 248 ntBASIC3.04□□□□□ -1.92
CLK1P49759 AC025518.1-201ENST00000479856 347 ntBASIC3.04□□□□□ -1.92
CLK1P49759 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CLK1P49759 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.04□□□□□ -1.92
CLK1P49759 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.04□□□□□ -1.92
CLK1P49759 SCARNA11.3-201ENST00000517276 130 ntBASIC3.04□□□□□ -1.92
CLK1P49759 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.04□□□□□ -1.92
CLK1P49759 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.04□□□□□ -1.92
CLK1P49759 AP003497.1-201ENST00000528472 562 ntBASIC3.04□□□□□ -1.92
CLK1P49759 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.04□□□□□ -1.92
CLK1P49759 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.04□□□□□ -1.92
CLK1P49759 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.04□□□□□ -1.92
CLK1P49759 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.04□□□□□ -1.92
CLK1P49759 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.04□□□□□ -1.92
CLK1P49759 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.04□□□□□ -1.92
CLK1P49759 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.04□□□□□ -1.92
CLK1P49759 AC015917.1-201ENST00000579654 510 ntBASIC3.04□□□□□ -1.92
CLK1P49759 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.04□□□□□ -1.92
CLK1P49759 MIR3118-1-201ENST00000581787 76 ntBASIC3.04□□□□□ -1.92
CLK1P49759 AC067852.3-201ENST00000589177 561 ntBASIC3.04□□□□□ -1.92
CLK1P49759 BNIP3P30-201ENST00000601184 574 ntBASIC3.04□□□□□ -1.92
CLK1P49759 AL356280.1-201ENST00000603614 379 ntBASIC3.04□□□□□ -1.92
CLK1P49759 AC104458.1-201ENST00000608243 463 ntBASIC3.04□□□□□ -1.92
CLK1P49759 OR10AB1P-201ENST00000609613 938 ntBASIC3.04□□□□□ -1.92
CLK1P49759 BX664608.1-201ENST00000610519 487 ntBASIC3.04□□□□□ -1.92
CLK1P49759 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.04□□□□□ -1.92
CLK1P49759 AC019226.1-201ENST00000625666 515 ntBASIC3.04□□□□□ -1.92
CLK1P49759 MTND1P37-201ENST00000636562 264 ntBASIC3.04□□□□□ -1.92
CLK1P49759 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.03□□□□□ -1.92
CLK1P49759 Y_RNA.9-201ENST00000362354 101 ntBASIC3.03□□□□□ -1.92
CLK1P49759 RNU5E-1-201ENST00000362477 120 ntBASIC3.03□□□□□ -1.92
CLK1P49759 RNY4P14-201ENST00000363656 96 ntBASIC3.03□□□□□ -1.92
CLK1P49759 RNU5E-4P-201ENST00000364931 120 ntBASIC3.03□□□□□ -1.92
CLK1P49759 RNU6-282P-201ENST00000365357 103 ntBASIC3.03□□□□□ -1.92
CLK1P49759 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CLK1P49759 RPL23AP32-201ENST00000395315 459 ntBASIC3.03□□□□□ -1.92
CLK1P49759 AL357075.1-201ENST00000404107 726 ntBASIC3.03□□□□□ -1.92
CLK1P49759 AL590002.1-201ENST00000406554 418 ntBASIC3.03□□□□□ -1.92
CLK1P49759 RN7SKP140-201ENST00000411196 284 ntBASIC3.03□□□□□ -1.92
CLK1P49759 AL359704.1-201ENST00000411586 781 ntBASIC3.03□□□□□ -1.92
CLK1P49759 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.03□□□□□ -1.92
CLK1P49759 RPL30P16-201ENST00000419341 429 ntBASIC3.03□□□□□ -1.92
CLK1P49759 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.03□□□□□ -1.92
CLK1P49759 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.03□□□□□ -1.92
CLK1P49759 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.03□□□□□ -1.92
CLK1P49759 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.03□□□□□ -1.92
CLK1P49759 RPS15AP5-201ENST00000436276 388 ntBASIC3.03□□□□□ -1.92
CLK1P49759 HMGB1P31-201ENST00000437242 427 ntBASIC3.03□□□□□ -1.92
CLK1P49759 CST9LP2-201ENST00000437612 320 ntBASIC3.03□□□□□ -1.92
CLK1P49759 MTATP6P30-201ENST00000443540 664 ntBASIC3.03□□□□□ -1.92
CLK1P49759 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.03□□□□□ -1.92
CLK1P49759 AC104389.3-201ENST00000445629 235 ntBASIC3.03□□□□□ -1.92
CLK1P49759 VN1R34P-201ENST00000447387 883 ntBASIC3.03□□□□□ -1.92
CLK1P49759 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.03□□□□□ -1.92
CLK1P49759 RN7SL75P-201ENST00000461926 281 ntBASIC3.03□□□□□ -1.92
CLK1P49759 AC092989.1-201ENST00000481235 277 ntBASIC3.03□□□□□ -1.92
CLK1P49759 RN7SL293P-201ENST00000481765 281 ntBASIC3.03□□□□□ -1.92
CLK1P49759 RPL36AP51-201ENST00000487216 318 ntBASIC3.03□□□□□ -1.92
CLK1P49759 AC069439.1-201ENST00000494739 167 ntBASIC3.03□□□□□ -1.92
CLK1P49759 PRDX4P1-201ENST00000507189 574 ntBASIC3.03□□□□□ -1.92
CLK1P49759 AC009646.1-201ENST00000510455 318 ntBASIC3.03□□□□□ -1.92
CLK1P49759 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.03□□□□□ -1.92
CLK1P49759 SCARNA20.6-201ENST00000517251 106 ntBASIC3.03□□□□□ -1.92
CLK1P49759 AC107934.1-201ENST00000522215 217 ntBASIC3.03□□□□□ -1.92
CLK1P49759 OR5AQ1P-201ENST00000527596 927 ntBASIC3.03□□□□□ -1.92
CLK1P49759 AC118273.2-201ENST00000532092 465 ntBASIC3.03□□□□□ -1.92
CLK1P49759 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.03□□□□□ -1.92
CLK1P49759 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.03□□□□□ -1.92
CLK1P49759 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.03□□□□□ -1.92
CLK1P49759 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.03□□□□□ -1.92
CLK1P49759 MIR3922-201ENST00000585192 84 ntBASIC3.03□□□□□ -1.92
CLK1P49759 AC245014.2-201ENST00000603689 287 ntBASIC3.03□□□□□ -1.92
CLK1P49759 AC246785.4-201ENST00000605374 287 ntBASIC3.03□□□□□ -1.92
CLK1P49759 FTX_3.1-201ENST00000610451 147 ntBASIC3.03□□□□□ -1.92
CLK1P49759 AL591516.1-201ENST00000611326 274 ntBASIC3.03□□□□□ -1.92
CLK1P49759 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms