Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC098614.2-201ENST00000426040 255 ntBASIC2.67□□□□□ -1.98
CDX1P47902 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.67□□□□□ -1.98
CDX1P47902 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.67□□□□□ -1.98
CDX1P47902 AC104332.2-201ENST00000429959 156 ntBASIC2.67□□□□□ -1.98
CDX1P47902 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.67□□□□□ -1.98
CDX1P47902 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.67□□□□□ -1.98
CDX1P47902 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.67□□□□□ -1.98
CDX1P47902 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.67□□□□□ -1.98
CDX1P47902 AC079448.1-201ENST00000449377 373 ntBASIC2.67□□□□□ -1.98
CDX1P47902 UQCRHP3-201ENST00000451503 251 ntBASIC2.67□□□□□ -1.98
CDX1P47902 C1DP4-201ENST00000455429 424 ntBASIC2.67□□□□□ -1.98
CDX1P47902 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CDX1P47902 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.67□□□□□ -1.98
CDX1P47902 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.67□□□□□ -1.98
CDX1P47902 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.67□□□□□ -1.98
CDX1P47902 AC113155.1-201ENST00000511141 769 ntBASIC2.67□□□□□ -1.98
CDX1P47902 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.67□□□□□ -1.98
CDX1P47902 RNU6-1183P-201ENST00000517054 60 ntBASIC2.67□□□□□ -1.98
CDX1P47902 MTCO2P4-201ENST00000517968 247 ntBASIC2.67□□□□□ -1.98
CDX1P47902 IGKV2-26-201ENST00000518305 343 ntBASIC2.67□□□□□ -1.98
CDX1P47902 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.67□□□□□ -1.98
CDX1P47902 AP001646.1-201ENST00000527936 915 ntBASIC2.67□□□□□ -1.98
CDX1P47902 RANP3-201ENST00000530970 276 ntBASIC2.67□□□□□ -1.98
CDX1P47902 OR5AL2P-201ENST00000532185 920 ntBASIC2.67□□□□□ -1.98
CDX1P47902 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.67□□□□□ -1.98
CDX1P47902 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.67□□□□□ -1.98
CDX1P47902 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.67□□□□□ -1.98
CDX1P47902 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.67□□□□□ -1.98
CDX1P47902 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.67□□□□□ -1.98
CDX1P47902 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
CDX1P47902 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.67□□□□□ -1.98
CDX1P47902 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.67□□□□□ -1.98
CDX1P47902 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.67□□□□□ -1.98
CDX1P47902 AC012119.1-201ENST00000603184 222 ntBASIC2.67□□□□□ -1.98
CDX1P47902 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.67□□□□□ -1.98
CDX1P47902 AC093648.1-201ENST00000623546 606 ntBASIC2.67□□□□□ -1.98
CDX1P47902 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.67□□□□□ -1.98
CDX1P47902 ZNF519P1-201ENST00000449011 1626 ntBASIC2.67□□□□□ -1.98
CDX1P47902 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CDX1P47902 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.67□□□□□ -1.98
CDX1P47902 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CDX1P47902 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.67□□□□□ -1.98
CDX1P47902 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.66□□□□□ -1.98
CDX1P47902 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CDX1P47902 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.66□□□□□ -1.98
CDX1P47902 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CDX1P47902 RNU6-395P-201ENST00000365662 106 ntBASIC2.66□□□□□ -1.98
CDX1P47902 SNORA46-201ENST00000384762 135 ntBASIC2.66□□□□□ -1.98
CDX1P47902 MIR1-2-201ENST00000384961 85 ntBASIC2.66□□□□□ -1.98
CDX1P47902 RNU6-750P-201ENST00000390946 107 ntBASIC2.66□□□□□ -1.98
CDX1P47902 AL357075.1-201ENST00000404107 726 ntBASIC2.66□□□□□ -1.98
CDX1P47902 RNU6-387P-201ENST00000411331 105 ntBASIC2.66□□□□□ -1.98
CDX1P47902 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.66□□□□□ -1.98
CDX1P47902 AL513477.1-202ENST00000417061 214 ntBASIC2.66□□□□□ -1.98
CDX1P47902 RPL7P10-201ENST00000417407 739 ntBASIC2.66□□□□□ -1.98
CDX1P47902 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.66□□□□□ -1.98
CDX1P47902 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.66□□□□□ -1.98
CDX1P47902 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.66□□□□□ -1.98
CDX1P47902 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.66□□□□□ -1.98
CDX1P47902 HMGN2P10-201ENST00000448085 265 ntBASIC2.66□□□□□ -1.98
CDX1P47902 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.66□□□□□ -1.98
CDX1P47902 AC233279.1-201ENST00000455300 423 ntBASIC2.66□□□□□ -1.98
CDX1P47902 RPL23AP67-201ENST00000465341 474 ntBASIC2.66□□□□□ -1.98
CDX1P47902 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.66□□□□□ -1.98
CDX1P47902 RN7SL807P-201ENST00000470923 297 ntBASIC2.66□□□□□ -1.98
CDX1P47902 AC023194.1-201ENST00000493084 308 ntBASIC2.66□□□□□ -1.98
CDX1P47902 AC026801.1-201ENST00000497178 464 ntBASIC2.66□□□□□ -1.98
CDX1P47902 HSPD1P15-201ENST00000505573 1122 ntBASIC2.66□□□□□ -1.98
CDX1P47902 SEM1P1-201ENST00000506694 209 ntBASIC2.66□□□□□ -1.98
CDX1P47902 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.66□□□□□ -1.98
CDX1P47902 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.66□□□□□ -1.98
CDX1P47902 AC010493.1-201ENST00000513479 292 ntBASIC2.66□□□□□ -1.98
CDX1P47902 SNORA31.19-201ENST00000517079 126 ntBASIC2.66□□□□□ -1.98
CDX1P47902 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
CDX1P47902 AC009902.1-201ENST00000519351 183 ntBASIC2.66□□□□□ -1.98
CDX1P47902 AP003072.2-201ENST00000527756 676 ntBASIC2.66□□□□□ -1.98
CDX1P47902 OR4R1P-201ENST00000529879 463 ntBASIC2.66□□□□□ -1.98
CDX1P47902 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.66□□□□□ -1.98
CDX1P47902 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.66□□□□□ -1.98
CDX1P47902 AC007151.1-201ENST00000572774 483 ntBASIC2.66□□□□□ -1.98
CDX1P47902 MTCO3P13-201ENST00000577757 781 ntBASIC2.66□□□□□ -1.98
CDX1P47902 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.66□□□□□ -1.98
CDX1P47902 AC096577.2-201ENST00000611455 153 ntBASIC2.66□□□□□ -1.98
CDX1P47902 AC009090.3-201ENST00000616553 565 ntBASIC2.66□□□□□ -1.98
CDX1P47902 AC099842.1-201ENST00000619919 596 ntBASIC2.66□□□□□ -1.98
CDX1P47902 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.66□□□□□ -1.98
CDX1P47902 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CDX1P47902 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.66□□□□□ -1.98
CDX1P47902 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CDX1P47902 AC032011.1-201ENST00000611703 1549 ntBASIC2.66□□□□□ -1.98
CDX1P47902 CKAP2P1-201ENST00000555477 2049 ntBASIC2.66□□□□□ -1.98
CDX1P47902 AC010889.1-201ENST00000566193 2666 ntBASIC2.65□□□□□ -1.98
CDX1P47902 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CDX1P47902 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
CDX1P47902 MTND5P17-201ENST00000418405 1603 ntBASIC2.65□□□□□ -1.98
CDX1P47902 AC108206.1-201ENST00000570186 4159 ntBASIC2.65□□□□□ -1.99
CDX1P47902 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
CDX1P47902 Z83843.1-201ENST00000604070 3685 ntBASIC2.65□□□□□ -1.99
CDX1P47902 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CDX1P47902 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms