Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 RAC1P7-201ENST00000445367 377 ntBASIC2.02□□□□□ -2.09
SCN4AP35499 AC234775.1-201ENST00000454247 670 ntBASIC2.02□□□□□ -2.09
SCN4AP35499 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.02□□□□□ -2.09
SCN4AP35499 AMD1P1-201ENST00000457220 922 ntBASIC2.02□□□□□ -2.09
SCN4AP35499 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.02□□□□□ -2.09
SCN4AP35499 TMEM251P1-201ENST00000503717 318 ntBASIC2.02□□□□□ -2.09
SCN4AP35499 RNA5SP364-201ENST00000516938 78 ntBASIC2.02□□□□□ -2.09
SCN4AP35499 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.02□□□□□ -2.09
SCN4AP35499 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.02□□□□□ -2.09
SCN4AP35499 OR5AQ1P-201ENST00000527596 927 ntBASIC2.02□□□□□ -2.09
SCN4AP35499 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.02□□□□□ -2.09
SCN4AP35499 OR4K8P-201ENST00000578842 1048 ntBASIC2.02□□□□□ -2.09
SCN4AP35499 BNIP3P39-201ENST00000601077 554 ntBASIC2.02□□□□□ -2.09
SCN4AP35499 AC106900.2-201ENST00000604994 317 ntBASIC2.02□□□□□ -2.09
SCN4AP35499 AL158042.1-201ENST00000605338 460 ntBASIC2.02□□□□□ -2.09
SCN4AP35499 AC024933.1-201ENST00000608472 348 ntBASIC2.02□□□□□ -2.09
SCN4AP35499 AP000240.1-201ENST00000609910 452 ntBASIC2.02□□□□□ -2.09
SCN4AP35499 AC140725.3-201ENST00000616193 880 ntBASIC2.02□□□□□ -2.09
SCN4AP35499 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
SCN4AP35499 AC009268.2-201ENST00000621925 457 ntBASIC2.02□□□□□ -2.09
SCN4AP35499 AL359740.1-201ENST00000624340 592 ntBASIC2.02□□□□□ -2.09
SCN4AP35499 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.02□□□□□ -2.09
SCN4AP35499 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.02□□□□□ -2.09
SCN4AP35499 RNU6-359P-201ENST00000365466 108 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 RNU6-1200P-201ENST00000384162 107 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 RNU6-432P-201ENST00000384196 109 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 POLHP1-201ENST00000411806 470 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.01□□□□□ -2.09
SCN4AP35499 HMGB1P49-201ENST00000418882 569 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 TMEM167AP1-201ENST00000423409 219 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.01□□□□□ -2.09
SCN4AP35499 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.01□□□□□ -2.09
SCN4AP35499 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.01□□□□□ -2.09
SCN4AP35499 PTENP1-201ENST00000447117 1215 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 AL021397.1-201ENST00000451806 248 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 HMGN2P16-201ENST00000456802 261 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 AC091951.3-201ENST00000504093 246 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.01□□□□□ -2.09
SCN4AP35499 AC022861.1-201ENST00000522981 663 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 CASP1P1-201ENST00000526345 212 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 AP003497.1-201ENST00000528472 562 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SCN4AP35499 AL161670.1-201ENST00000554348 137 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.01□□□□□ -2.09
SCN4AP35499 AP001429.1-201ENST00000602568 530 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 AC013444.2-201ENST00000603317 787 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 MTND3P19-201ENST00000603825 345 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.01□□□□□ -2.09
SCN4AP35499 AL596245.1-201ENST00000618994 362 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 AP000484.1-201ENST00000620067 1252 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 AC116618.1-201ENST00000634617 774 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 AL390862.1-201ENST00000635467 1469 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.01□□□□□ -2.09
SCN4AP35499 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.01□□□□□ -2.09
SCN4AP35499 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SCN4AP35499 RNU6-278P-201ENST00000390945 109 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 RNU2-40P-201ENST00000410833 196 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 HMGN2P38-201ENST00000423806 265 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 MTATP6P4-201ENST00000427725 675 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 AL590233.1-201ENST00000430017 456 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.01□□□□□ -2.09
SCN4AP35499 PAXBP1P1-201ENST00000449315 447 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 AL009048.1-201ENST00000450437 298 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 RNU6-420P-201ENST00000458780 107 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.01□□□□□ -2.09
SCN4AP35499 AC093281.2-201ENST00000510153 597 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 SNORA31.22-201ENST00000517204 135 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 AC007375.1-201ENST00000554513 578 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 MTND1P8-201ENST00000571424 950 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 RPS3AP23-202ENST00000574601 686 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 FAM60BP-201ENST00000578364 658 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 AL133507.1-201ENST00000605269 557 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 AC008962.1-201ENST00000605729 304 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 PART1_2.1-201ENST00000612397 250 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.01□□□□□ -2.09
SCN4AP35499 PCMTD1P7-201ENST00000634506 357 ntBASIC2.01□□□□□ -2.09
SCN4AP35499 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2□□□□□ -2.09
SCN4AP35499 AL022578.1-201ENST00000439330 1433 ntBASIC2□□□□□ -2.09
SCN4AP35499 AP000776.1-201ENST00000530032 1663 ntBASIC2□□□□□ -2.09
SCN4AP35499 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SCN4AP35499 RNU6-223P-201ENST00000362830 107 ntBASIC2□□□□□ -2.09
SCN4AP35499 SNORA67.1-201ENST00000364749 141 ntBASIC2□□□□□ -2.09
SCN4AP35499 AL591034.1-201ENST00000407447 340 ntBASIC2□□□□□ -2.09
SCN4AP35499 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2□□□□□ -2.09
SCN4AP35499 RNU2-43P-201ENST00000410306 190 ntBASIC2□□□□□ -2.09
SCN4AP35499 RN7SKP101-201ENST00000411376 320 ntBASIC2□□□□□ -2.09
SCN4AP35499 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2□□□□□ -2.09
SCN4AP35499 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2□□□□□ -2.09
SCN4AP35499 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2□□□□□ -2.09
SCN4AP35499 ELOCP9-201ENST00000418624 239 ntBASIC2□□□□□ -2.09
SCN4AP35499 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2□□□□□ -2.09
SCN4AP35499 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2□□□□□ -2.09
SCN4AP35499 AL356867.1-201ENST00000429623 299 ntBASIC2□□□□□ -2.09
SCN4AP35499 USP9YP24-201ENST00000434374 697 ntBASIC2□□□□□ -2.09
SCN4AP35499 AL121871.1-201ENST00000443413 436 ntBASIC2□□□□□ -2.09
SCN4AP35499 USP9YP17-201ENST00000444617 696 ntBASIC2□□□□□ -2.09
SCN4AP35499 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms