Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 NRON-201ENST00000517270 370 ntBASIC3.39□□□□□ -1.87
RFC1P35251 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.39□□□□□ -1.87
RFC1P35251 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.39□□□□□ -1.87
RFC1P35251 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.39□□□□□ -1.87
RFC1P35251 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.39□□□□□ -1.87
RFC1P35251 TRAV37-201ENST00000553906 342 ntBASIC3.39□□□□□ -1.87
RFC1P35251 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.39□□□□□ -1.87
RFC1P35251 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.39□□□□□ -1.87
RFC1P35251 MIR3921-201ENST00000577308 85 ntBASIC3.39□□□□□ -1.87
RFC1P35251 MIR2682-201ENST00000580305 110 ntBASIC3.39□□□□□ -1.87
RFC1P35251 AL670379.6-201ENST00000603753 252 ntBASIC3.39□□□□□ -1.87
RFC1P35251 AL670379.11-201ENST00000604059 253 ntBASIC3.39□□□□□ -1.87
RFC1P35251 AC008162.1-201ENST00000604718 254 ntBASIC3.39□□□□□ -1.87
RFC1P35251 AL670379.1-201ENST00000604752 252 ntBASIC3.39□□□□□ -1.87
RFC1P35251 AL670379.5-201ENST00000605253 252 ntBASIC3.39□□□□□ -1.87
RFC1P35251 AL670379.12-201ENST00000605291 253 ntBASIC3.39□□□□□ -1.87
RFC1P35251 AL670379.8-201ENST00000605353 252 ntBASIC3.39□□□□□ -1.87
RFC1P35251 AC073657.2-201ENST00000605661 303 ntBASIC3.39□□□□□ -1.87
RFC1P35251 AL670379.7-201ENST00000605823 252 ntBASIC3.39□□□□□ -1.87
RFC1P35251 RMST_3.1-201ENST00000611651 109 ntBASIC3.39□□□□□ -1.87
RFC1P35251 AL157817.1-201ENST00000614264 790 ntBASIC3.39□□□□□ -1.87
RFC1P35251 AL138880.2-201ENST00000616214 239 ntBASIC3.39□□□□□ -1.87
RFC1P35251 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.39□□□□□ -1.87
RFC1P35251 FRG1KP-201ENST00000623592 341 ntBASIC3.39□□□□□ -1.87
RFC1P35251 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.39□□□□□ -1.87
RFC1P35251 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.39□□□□□ -1.87
RFC1P35251 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RFC1P35251 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RFC1P35251 CKAP2P1-201ENST00000555477 2049 ntBASIC3.39□□□□□ -1.87
RFC1P35251 AC004972.1-201ENST00000623934 2209 ntBASIC3.39□□□□□ -1.87
RFC1P35251 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RFC1P35251 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RFC1P35251 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFC1P35251 SNORD56.3-201ENST00000363507 71 ntBASIC3.38□□□□□ -1.87
RFC1P35251 SNORA14A-201ENST00000364773 135 ntBASIC3.38□□□□□ -1.87
RFC1P35251 RNU6-996P-201ENST00000365438 107 ntBASIC3.38□□□□□ -1.87
RFC1P35251 RNU6-1068P-201ENST00000410958 103 ntBASIC3.38□□□□□ -1.87
RFC1P35251 RN7SKP140-201ENST00000411196 284 ntBASIC3.38□□□□□ -1.87
RFC1P35251 ZNF90P2-204ENST00000419323 1075 ntBASIC3.38□□□□□ -1.87
RFC1P35251 AC005300.1-201ENST00000428401 373 ntBASIC3.38□□□□□ -1.87
RFC1P35251 RPL36AP6-201ENST00000435770 321 ntBASIC3.38□□□□□ -1.87
RFC1P35251 RPL23AP22-201ENST00000437556 453 ntBASIC3.38□□□□□ -1.87
RFC1P35251 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.38□□□□□ -1.87
RFC1P35251 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.38□□□□□ -1.87
RFC1P35251 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.38□□□□□ -1.87
RFC1P35251 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.38□□□□□ -1.87
RFC1P35251 AC091153.1-201ENST00000466297 402 ntBASIC3.38□□□□□ -1.87
RFC1P35251 GMFBP1-201ENST00000467831 427 ntBASIC3.38□□□□□ -1.87
RFC1P35251 RPL31P58-201ENST00000469001 379 ntBASIC3.38□□□□□ -1.87
RFC1P35251 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.38□□□□□ -1.87
RFC1P35251 PRDX4P1-201ENST00000507189 574 ntBASIC3.38□□□□□ -1.87
RFC1P35251 GMPSP1-201ENST00000514075 579 ntBASIC3.38□□□□□ -1.87
RFC1P35251 RN7SKP219-201ENST00000516825 296 ntBASIC3.38□□□□□ -1.87
RFC1P35251 RN7SKP258-201ENST00000517151 304 ntBASIC3.38□□□□□ -1.87
RFC1P35251 RNA5SP380-201ENST00000517190 98 ntBASIC3.38□□□□□ -1.87
RFC1P35251 RNU6-840P-201ENST00000517275 65 ntBASIC3.38□□□□□ -1.87
RFC1P35251 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.38□□□□□ -1.87
RFC1P35251 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.38□□□□□ -1.87
RFC1P35251 OR5AL2P-201ENST00000532185 920 ntBASIC3.38□□□□□ -1.87
RFC1P35251 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.38□□□□□ -1.87
RFC1P35251 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.38□□□□□ -1.87
RFC1P35251 AL133393.1-201ENST00000603277 287 ntBASIC3.38□□□□□ -1.87
RFC1P35251 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.38□□□□□ -1.87
RFC1P35251 AL355073.2-201ENST00000612106 557 ntBASIC3.38□□□□□ -1.87
RFC1P35251 AL020991.1-201ENST00000612314 373 ntBASIC3.38□□□□□ -1.87
RFC1P35251 AP001486.3-201ENST00000615334 372 ntBASIC3.38□□□□□ -1.87
RFC1P35251 AC012314.7-201ENST00000619693 93 ntBASIC3.38□□□□□ -1.87
RFC1P35251 AL589994.2-201ENST00000621124 579 ntBASIC3.38□□□□□ -1.87
RFC1P35251 AC010338.1-201ENST00000621823 717 ntBASIC3.38□□□□□ -1.87
RFC1P35251 DUXAP9-208ENST00000622815 614 ntBASIC3.38□□□□□ -1.87
RFC1P35251 AC011155.2-201ENST00000623202 216 ntBASIC3.38□□□□□ -1.87
RFC1P35251 AC091903.1-201ENST00000624322 454 ntBASIC3.38□□□□□ -1.87
RFC1P35251 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.38□□□□□ -1.87
RFC1P35251 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.38□□□□□ -1.87
RFC1P35251 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RFC1P35251 MTND5P27-201ENST00000428871 1720 ntBASIC3.38□□□□□ -1.87
RFC1P35251 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.38□□□□□ -1.87
RFC1P35251 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
RFC1P35251 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
RFC1P35251 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RFC1P35251 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RFC1P35251 RNU5A-1-201ENST00000362698 116 ntBASIC3.37□□□□□ -1.87
RFC1P35251 Y_RNA.255-201ENST00000364581 97 ntBASIC3.37□□□□□ -1.87
RFC1P35251 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RFC1P35251 Y_RNA.573-201ENST00000384763 105 ntBASIC3.37□□□□□ -1.87
RFC1P35251 MIR23B-201ENST00000384832 97 ntBASIC3.37□□□□□ -1.87
RFC1P35251 MIR514A1-201ENST00000385133 98 ntBASIC3.37□□□□□ -1.87
RFC1P35251 RNA5SP171-201ENST00000391071 115 ntBASIC3.37□□□□□ -1.87
RFC1P35251 SAR1AP2-201ENST00000392696 594 ntBASIC3.37□□□□□ -1.87
RFC1P35251 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RFC1P35251 FGF7P8-201ENST00000402994 292 ntBASIC3.37□□□□□ -1.87
RFC1P35251 MIR1290-201ENST00000408735 78 ntBASIC3.37□□□□□ -1.87
RFC1P35251 Y_RNA.604-201ENST00000410574 102 ntBASIC3.37□□□□□ -1.87
RFC1P35251 AL451054.2-201ENST00000420896 202 ntBASIC3.37□□□□□ -1.87
RFC1P35251 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.37□□□□□ -1.87
RFC1P35251 AL353572.1-201ENST00000442490 417 ntBASIC3.37□□□□□ -1.87
RFC1P35251 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.37□□□□□ -1.87
RFC1P35251 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.37□□□□□ -1.87
RFC1P35251 Z75741.1-201ENST00000446793 314 ntBASIC3.37□□□□□ -1.87
RFC1P35251 AL358232.1-201ENST00000448030 501 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms