Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 RNU6-876P-201ENST00000391295 104 ntBASIC4.22□□□□□ -1.73
CNGA1P29973 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.22□□□□□ -1.73
CNGA1P29973 RPS4XP3-201ENST00000398541 413 ntBASIC4.22□□□□□ -1.73
CNGA1P29973 AC138393.2-201ENST00000414742 246 ntBASIC4.22□□□□□ -1.73
CNGA1P29973 AC063979.1-201ENST00000415539 377 ntBASIC4.22□□□□□ -1.73
CNGA1P29973 ZNF863P-201ENST00000426746 417 ntBASIC4.22□□□□□ -1.73
CNGA1P29973 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.22□□□□□ -1.73
CNGA1P29973 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.22□□□□□ -1.73
CNGA1P29973 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.22□□□□□ -1.73
CNGA1P29973 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.22□□□□□ -1.73
CNGA1P29973 AC009901.1-201ENST00000506703 541 ntBASIC4.22□□□□□ -1.73
CNGA1P29973 NDUFB4P9-201ENST00000511646 388 ntBASIC4.22□□□□□ -1.73
CNGA1P29973 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.22□□□□□ -1.73
CNGA1P29973 SNORA20.3-201ENST00000516880 132 ntBASIC4.22□□□□□ -1.73
CNGA1P29973 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.22□□□□□ -1.73
CNGA1P29973 BNIP3P6-201ENST00000549284 499 ntBASIC4.22□□□□□ -1.73
CNGA1P29973 AL118558.2-201ENST00000556294 238 ntBASIC4.22□□□□□ -1.73
CNGA1P29973 AL157871.3-201ENST00000557231 293 ntBASIC4.22□□□□□ -1.73
CNGA1P29973 AMZ2P1-203ENST00000565833 850 ntBASIC4.22□□□□□ -1.73
CNGA1P29973 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.22□□□□□ -1.73
CNGA1P29973 MIR1273C-201ENST00000578669 77 ntBASIC4.22□□□□□ -1.73
CNGA1P29973 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.22□□□□□ -1.73
CNGA1P29973 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CNGA1P29973 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
CNGA1P29973 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CNGA1P29973 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CNGA1P29973 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.21□□□□□ -1.73
CNGA1P29973 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.21□□□□□ -1.73
CNGA1P29973 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CNGA1P29973 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CNGA1P29973 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CNGA1P29973 RNU6-371P-201ENST00000364283 108 ntBASIC4.21□□□□□ -1.74
CNGA1P29973 RNU6-522P-201ENST00000364497 107 ntBASIC4.21□□□□□ -1.74
CNGA1P29973 RNU6-140P-201ENST00000384566 108 ntBASIC4.21□□□□□ -1.74
CNGA1P29973 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CNGA1P29973 SNORA16.2-201ENST00000390991 127 ntBASIC4.21□□□□□ -1.74
CNGA1P29973 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.21□□□□□ -1.74
CNGA1P29973 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.21□□□□□ -1.74
CNGA1P29973 ATP5HP2-201ENST00000433885 485 ntBASIC4.21□□□□□ -1.74
CNGA1P29973 SNRPEP9-201ENST00000436794 238 ntBASIC4.21□□□□□ -1.74
CNGA1P29973 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.21□□□□□ -1.74
CNGA1P29973 HMGB3P11-201ENST00000440127 604 ntBASIC4.21□□□□□ -1.74
CNGA1P29973 AC069499.1-201ENST00000489433 509 ntBASIC4.21□□□□□ -1.74
CNGA1P29973 AC018710.1-201ENST00000506509 158 ntBASIC4.21□□□□□ -1.74
CNGA1P29973 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.21□□□□□ -1.74
CNGA1P29973 CENPUP1-201ENST00000526649 1202 ntBASIC4.21□□□□□ -1.74
CNGA1P29973 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.21□□□□□ -1.74
CNGA1P29973 AC011611.1-201ENST00000552179 197 ntBASIC4.21□□□□□ -1.74
CNGA1P29973 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.21□□□□□ -1.74
CNGA1P29973 MTCO3P23-201ENST00000561363 289 ntBASIC4.21□□□□□ -1.74
CNGA1P29973 BNIP3P10-201ENST00000605360 577 ntBASIC4.21□□□□□ -1.74
CNGA1P29973 AC002076.2-201ENST00000617362 122 ntBASIC4.21□□□□□ -1.74
CNGA1P29973 AP003400.5-201ENST00000624827 617 ntBASIC4.21□□□□□ -1.74
CNGA1P29973 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.21□□□□□ -1.74
CNGA1P29973 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.21□□□□□ -1.74
CNGA1P29973 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.21□□□□□ -1.74
CNGA1P29973 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CNGA1P29973 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CNGA1P29973 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CNGA1P29973 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CNGA1P29973 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CNGA1P29973 AC007823.1-201ENST00000569932 1566 ntBASIC4.2□□□□□ -1.74
CNGA1P29973 FTLP6-201ENST00000355274 422 ntBASIC4.2□□□□□ -1.74
CNGA1P29973 RNU6-82P-201ENST00000363970 107 ntBASIC4.2□□□□□ -1.74
CNGA1P29973 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CNGA1P29973 SNORD70.1-201ENST00000391007 85 ntBASIC4.2□□□□□ -1.74
CNGA1P29973 RNU6-332P-201ENST00000391193 108 ntBASIC4.2□□□□□ -1.74
CNGA1P29973 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.2□□□□□ -1.74
CNGA1P29973 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.2□□□□□ -1.74
CNGA1P29973 ARL5AP1-201ENST00000418991 388 ntBASIC4.2□□□□□ -1.74
CNGA1P29973 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.2□□□□□ -1.74
CNGA1P29973 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.2□□□□□ -1.74
CNGA1P29973 AL121601.2-201ENST00000438019 707 ntBASIC4.2□□□□□ -1.74
CNGA1P29973 AL360271.2-201ENST00000447710 161 ntBASIC4.2□□□□□ -1.74
CNGA1P29973 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.2□□□□□ -1.74
CNGA1P29973 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.2□□□□□ -1.74
CNGA1P29973 AC104136.1-201ENST00000512969 394 ntBASIC4.2□□□□□ -1.74
CNGA1P29973 RNA5SP165-201ENST00000517142 115 ntBASIC4.2□□□□□ -1.74
CNGA1P29973 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.2□□□□□ -1.74
CNGA1P29973 HMGB1P14-201ENST00000557424 591 ntBASIC4.2□□□□□ -1.74
CNGA1P29973 AC090877.1-201ENST00000561418 344 ntBASIC4.2□□□□□ -1.74
CNGA1P29973 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.2□□□□□ -1.74
CNGA1P29973 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.2□□□□□ -1.74
CNGA1P29973 MIR548AC-201ENST00000585049 88 ntBASIC4.2□□□□□ -1.74
CNGA1P29973 AC004805.2-201ENST00000605382 482 ntBASIC4.2□□□□□ -1.74
CNGA1P29973 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CNGA1P29973 AL355365.1-201ENST00000616480 294 ntBASIC4.2□□□□□ -1.74
CNGA1P29973 MIR6076-201ENST00000617521 113 ntBASIC4.2□□□□□ -1.74
CNGA1P29973 AC009033.1-201ENST00000624279 431 ntBASIC4.2□□□□□ -1.74
CNGA1P29973 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.2□□□□□ -1.74
CNGA1P29973 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.2□□□□□ -1.74
CNGA1P29973 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.2□□□□□ -1.74
CNGA1P29973 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CNGA1P29973 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.19□□□□□ -1.74
CNGA1P29973 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.19□□□□□ -1.74
CNGA1P29973 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.19□□□□□ -1.74
CNGA1P29973 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CNGA1P29973 SNORD9-201ENST00000362566 104 ntBASIC4.19□□□□□ -1.74
CNGA1P29973 Y_RNA.86-201ENST00000363020 111 ntBASIC4.19□□□□□ -1.74
CNGA1P29973 U3.12-201ENST00000364498 214 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms