Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 MTCO1P42-201ENST00000457379 726 ntBASIC1.4□□□□□ -2.19
HLA-DMBP28068 RNU7-136P-201ENST00000458819 69 ntBASIC1.4□□□□□ -2.19
HLA-DMBP28068 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.4□□□□□ -2.19
HLA-DMBP28068 AC007182.2-201ENST00000489251 402 ntBASIC1.4□□□□□ -2.19
HLA-DMBP28068 AC093281.2-201ENST00000510153 597 ntBASIC1.4□□□□□ -2.19
HLA-DMBP28068 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DMBP28068 RNU6-927P-201ENST00000516199 100 ntBASIC1.4□□□□□ -2.19
HLA-DMBP28068 RNU6-295P-201ENST00000516901 104 ntBASIC1.4□□□□□ -2.19
HLA-DMBP28068 RNU6-548P-201ENST00000517083 115 ntBASIC1.4□□□□□ -2.19
HLA-DMBP28068 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DMBP28068 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.4□□□□□ -2.19
HLA-DMBP28068 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DMBP28068 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DMBP28068 AC006199.1-201ENST00000548728 219 ntBASIC1.4□□□□□ -2.19
HLA-DMBP28068 DUXAP1-201ENST00000556632 463 ntBASIC1.4□□□□□ -2.19
HLA-DMBP28068 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DMBP28068 AC015712.3-201ENST00000559380 164 ntBASIC1.4□□□□□ -2.19
HLA-DMBP28068 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DMBP28068 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DMBP28068 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.4□□□□□ -2.19
HLA-DMBP28068 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.4□□□□□ -2.19
HLA-DMBP28068 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.4□□□□□ -2.19
HLA-DMBP28068 AC011494.1-201ENST00000596454 237 ntBASIC1.4□□□□□ -2.19
HLA-DMBP28068 VN1R87P-201ENST00000596706 487 ntBASIC1.4□□□□□ -2.19
HLA-DMBP28068 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.4□□□□□ -2.19
HLA-DMBP28068 AC068790.3-201ENST00000602988 553 ntBASIC1.4□□□□□ -2.19
HLA-DMBP28068 AC004908.2-201ENST00000609090 574 ntBASIC1.4□□□□□ -2.19
HLA-DMBP28068 TUG1_2.1-201ENST00000614234 87 ntBASIC1.4□□□□□ -2.19
HLA-DMBP28068 AC005296.1-201ENST00000616145 209 ntBASIC1.4□□□□□ -2.19
HLA-DMBP28068 AC009233.1-201ENST00000616477 371 ntBASIC1.4□□□□□ -2.19
HLA-DMBP28068 AL158801.5-201ENST00000623123 465 ntBASIC1.4□□□□□ -2.19
HLA-DMBP28068 AC079416.3-201ENST00000624479 549 ntBASIC1.4□□□□□ -2.19
HLA-DMBP28068 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.4□□□□□ -2.19
HLA-DMBP28068 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
HLA-DMBP28068 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
HLA-DMBP28068 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
HLA-DMBP28068 RNA5SP432-201ENST00000362480 116 ntBASIC1.39□□□□□ -2.19
HLA-DMBP28068 MIR764-201ENST00000390811 85 ntBASIC1.39□□□□□ -2.19
HLA-DMBP28068 RNU6-952P-201ENST00000391164 108 ntBASIC1.39□□□□□ -2.19
HLA-DMBP28068 AL512604.1-201ENST00000404812 257 ntBASIC1.39□□□□□ -2.19
HLA-DMBP28068 RNU2-42P-201ENST00000410697 113 ntBASIC1.39□□□□□ -2.19
HLA-DMBP28068 EDDM3CP-201ENST00000415977 425 ntBASIC1.39□□□□□ -2.19
HLA-DMBP28068 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.39□□□□□ -2.19
HLA-DMBP28068 XKRYP1-201ENST00000423438 492 ntBASIC1.39□□□□□ -2.19
HLA-DMBP28068 RPL17P35-201ENST00000432217 549 ntBASIC1.39□□□□□ -2.19
HLA-DMBP28068 XKRYP2-201ENST00000432915 492 ntBASIC1.39□□□□□ -2.19
HLA-DMBP28068 NANOGP2-201ENST00000435391 727 ntBASIC1.39□□□□□ -2.19
HLA-DMBP28068 MTND4P15-201ENST00000437913 1033 ntBASIC1.39□□□□□ -2.19
HLA-DMBP28068 COX7BP2-201ENST00000437976 242 ntBASIC1.39□□□□□ -2.19
HLA-DMBP28068 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.39□□□□□ -2.19
HLA-DMBP28068 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.39□□□□□ -2.19
HLA-DMBP28068 PTGES3P1-201ENST00000439531 483 ntBASIC1.39□□□□□ -2.19
HLA-DMBP28068 TPT1P14-201ENST00000448018 505 ntBASIC1.39□□□□□ -2.19
HLA-DMBP28068 RPL21P134-201ENST00000453468 483 ntBASIC1.39□□□□□ -2.19
HLA-DMBP28068 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.39□□□□□ -2.19
HLA-DMBP28068 AC021382.1-201ENST00000483523 359 ntBASIC1.39□□□□□ -2.19
HLA-DMBP28068 AC107032.1-201ENST00000485945 480 ntBASIC1.39□□□□□ -2.19
HLA-DMBP28068 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.39□□□□□ -2.19
HLA-DMBP28068 AC020699.1-201ENST00000505161 445 ntBASIC1.39□□□□□ -2.19
HLA-DMBP28068 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.39□□□□□ -2.19
HLA-DMBP28068 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.39□□□□□ -2.19
HLA-DMBP28068 RNA5SP112-201ENST00000515937 99 ntBASIC1.39□□□□□ -2.19
HLA-DMBP28068 RNU6-583P-201ENST00000516012 92 ntBASIC1.39□□□□□ -2.19
HLA-DMBP28068 MTCO2P15-201ENST00000532655 656 ntBASIC1.39□□□□□ -2.19
HLA-DMBP28068 MIR4419B-201ENST00000577260 68 ntBASIC1.39□□□□□ -2.19
HLA-DMBP28068 AC025811.1-201ENST00000604312 472 ntBASIC1.39□□□□□ -2.19
HLA-DMBP28068 AL138963.2-201ENST00000605137 226 ntBASIC1.39□□□□□ -2.19
HLA-DMBP28068 AC008759.3-201ENST00000613300 508 ntBASIC1.39□□□□□ -2.19
HLA-DMBP28068 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
HLA-DMBP28068 AC008555.8-201ENST00000623602 2168 ntBASIC1.39□□□□□ -2.19
HLA-DMBP28068 AC103710.2-202ENST00000641454 2853 ntBASIC1.39□□□□□ -2.19
HLA-DMBP28068 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.39□□□□□ -2.19
HLA-DMBP28068 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
HLA-DMBP28068 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.38□□□□□ -2.19
HLA-DMBP28068 RNU6-1159P-201ENST00000362933 107 ntBASIC1.38□□□□□ -2.19
HLA-DMBP28068 RNU6-97P-201ENST00000363387 104 ntBASIC1.38□□□□□ -2.19
HLA-DMBP28068 Y_RNA.245-201ENST00000364493 95 ntBASIC1.38□□□□□ -2.19
HLA-DMBP28068 U8.13-201ENST00000390842 128 ntBASIC1.38□□□□□ -2.19
HLA-DMBP28068 SNORA40.18-201ENST00000391200 128 ntBASIC1.38□□□□□ -2.19
HLA-DMBP28068 RNU6-516P-201ENST00000411381 104 ntBASIC1.38□□□□□ -2.19
HLA-DMBP28068 RPS24P7-201ENST00000416921 246 ntBASIC1.38□□□□□ -2.19
HLA-DMBP28068 RPL7P54-201ENST00000438336 674 ntBASIC1.38□□□□□ -2.19
HLA-DMBP28068 AL161651.1-201ENST00000440882 223 ntBASIC1.38□□□□□ -2.19
HLA-DMBP28068 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.38□□□□□ -2.19
HLA-DMBP28068 BX322784.1-201ENST00000455793 1077 ntBASIC1.38□□□□□ -2.19
HLA-DMBP28068 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.38□□□□□ -2.19
HLA-DMBP28068 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.38□□□□□ -2.19
HLA-DMBP28068 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
HLA-DMBP28068 RPS29P11-201ENST00000496507 171 ntBASIC1.38□□□□□ -2.19
HLA-DMBP28068 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
HLA-DMBP28068 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.38□□□□□ -2.19
HLA-DMBP28068 RNA5SP182-201ENST00000516064 82 ntBASIC1.38□□□□□ -2.19
HLA-DMBP28068 RNA5SP137-201ENST00000516833 135 ntBASIC1.38□□□□□ -2.19
HLA-DMBP28068 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.38□□□□□ -2.19
HLA-DMBP28068 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.38□□□□□ -2.19
HLA-DMBP28068 AC024614.2-201ENST00000577584 372 ntBASIC1.38□□□□□ -2.19
HLA-DMBP28068 MIR4769-201ENST00000584126 77 ntBASIC1.38□□□□□ -2.19
HLA-DMBP28068 AL445435.1-201ENST00000604232 665 ntBASIC1.38□□□□□ -2.19
HLA-DMBP28068 AL355297.2-201ENST00000604792 129 ntBASIC1.38□□□□□ -2.19
HLA-DMBP28068 AC069545.1-201ENST00000605671 358 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms