Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC079140.5-201ENST00000507882 310 ntBASIC3.83□□□□□ -1.8
POLR2AP24928 RNU6-189P-201ENST00000516120 101 ntBASIC3.83□□□□□ -1.8
POLR2AP24928 AC008489.1-201ENST00000524271 483 ntBASIC3.83□□□□□ -1.8
POLR2AP24928 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.83□□□□□ -1.8
POLR2AP24928 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.83□□□□□ -1.8
POLR2AP24928 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.83□□□□□ -1.8
POLR2AP24928 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.83□□□□□ -1.8
POLR2AP24928 AL159153.1-201ENST00000619688 317 ntBASIC3.83□□□□□ -1.8
POLR2AP24928 Z69720.2-201ENST00000624755 279 ntBASIC3.83□□□□□ -1.8
POLR2AP24928 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
POLR2AP24928 SRP72P2-201ENST00000344851 1979 ntBASIC3.83□□□□□ -1.8
POLR2AP24928 AC066616.2-201ENST00000559334 1481 ntBASIC3.83□□□□□ -1.8
POLR2AP24928 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
POLR2AP24928 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
POLR2AP24928 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
POLR2AP24928 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
POLR2AP24928 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
POLR2AP24928 Y_RNA.395-201ENST00000383945 109 ntBASIC3.83□□□□□ -1.8
POLR2AP24928 RNU6-601P-201ENST00000384540 107 ntBASIC3.83□□□□□ -1.8
POLR2AP24928 AC018630.2-202ENST00000422992 927 ntBASIC3.83□□□□□ -1.8
POLR2AP24928 OR4K11P-201ENST00000431829 904 ntBASIC3.83□□□□□ -1.8
POLR2AP24928 MTATP6P16-201ENST00000434543 526 ntBASIC3.83□□□□□ -1.8
POLR2AP24928 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
POLR2AP24928 AL118520.1-201ENST00000450770 291 ntBASIC3.83□□□□□ -1.8
POLR2AP24928 AC107399.1-201ENST00000451226 265 ntBASIC3.83□□□□□ -1.8
POLR2AP24928 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.83□□□□□ -1.8
POLR2AP24928 ELOCP24-201ENST00000456370 334 ntBASIC3.83□□□□□ -1.8
POLR2AP24928 TRBVA-201ENST00000498804 316 ntBASIC3.83□□□□□ -1.8
POLR2AP24928 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.83□□□□□ -1.8
POLR2AP24928 CCDC34P1-201ENST00000507441 517 ntBASIC3.83□□□□□ -1.8
POLR2AP24928 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.83□□□□□ -1.8
POLR2AP24928 AL161670.1-201ENST00000554348 137 ntBASIC3.83□□□□□ -1.8
POLR2AP24928 OR4K8P-201ENST00000578842 1048 ntBASIC3.83□□□□□ -1.8
POLR2AP24928 MIR3942-201ENST00000585264 109 ntBASIC3.83□□□□□ -1.8
POLR2AP24928 AL590099.1-201ENST00000615276 138 ntBASIC3.83□□□□□ -1.8
POLR2AP24928 MTND4LP32-201ENST00000636111 270 ntBASIC3.83□□□□□ -1.8
POLR2AP24928 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
POLR2AP24928 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.83□□□□□ -1.8
POLR2AP24928 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC3.83□□□□□ -1.8
POLR2AP24928 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
POLR2AP24928 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
POLR2AP24928 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
POLR2AP24928 AC068647.1-201ENST00000489539 2265 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
POLR2AP24928 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.82□□□□□ -1.8
POLR2AP24928 SNORA62.1-201ENST00000364287 154 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 RNU4-20P-201ENST00000365601 151 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 RNU6-39P-201ENST00000384344 107 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 Y_RNA.557-201ENST00000384680 107 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 MIR514A2-201ENST00000385131 88 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 MIR514A3-201ENST00000385132 88 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 AL121834.1-202ENST00000404494 277 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.82□□□□□ -1.8
POLR2AP24928 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.82□□□□□ -1.8
POLR2AP24928 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.82□□□□□ -1.8
POLR2AP24928 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.82□□□□□ -1.8
POLR2AP24928 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.82□□□□□ -1.8
POLR2AP24928 AC104806.1-201ENST00000508720 308 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 AC093303.1-201ENST00000514549 295 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 AC022882.1-201ENST00000532142 501 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.82□□□□□ -1.8
POLR2AP24928 SCOCP1-201ENST00000554676 349 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 AC090615.1-201ENST00000577519 154 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 MIR4703-201ENST00000577728 79 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.82□□□□□ -1.8
POLR2AP24928 AL078596.1-201ENST00000624856 447 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
POLR2AP24928 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
POLR2AP24928 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.82□□□□□ -1.8
POLR2AP24928 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.82□□□□□ -1.8
POLR2AP24928 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.82□□□□□ -1.8
POLR2AP24928 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
POLR2AP24928 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
POLR2AP24928 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
POLR2AP24928 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
POLR2AP24928 AC244517.1-201ENST00000606030 2086 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
POLR2AP24928 RNU6-511P-201ENST00000363496 107 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 RNA5SP235-201ENST00000365411 114 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.82□□□□□ -1.8
POLR2AP24928 RNU6-38P-201ENST00000384085 107 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 RNU2-15P-201ENST00000410692 191 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 AL139396.1-201ENST00000421137 167 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 RAC1P6-201ENST00000423911 575 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.82□□□□□ -1.8
POLR2AP24928 RAC1P7-201ENST00000445367 377 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 AC016696.1-201ENST00000446949 318 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.82□□□□□ -1.8
POLR2AP24928 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.82□□□□□ -1.8
POLR2AP24928 RNU6-333P-201ENST00000459117 107 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 AC021146.1-201ENST00000511202 716 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.82□□□□□ -1.8
POLR2AP24928 RNU6-123P-201ENST00000516163 102 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 AC022634.1-201ENST00000520765 532 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 MIR4293-201ENST00000584305 78 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 AC123786.2-201ENST00000603459 275 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 AC113194.1-201ENST00000606037 500 ntBASIC3.82□□□□□ -1.8
POLR2AP24928 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
POLR2AP24928 AL355596.1-201ENST00000565399 3996 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms