Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 MAPK10-253ENST00000641010 4072 ntBASIC3.44□□□□□ -1.86
TNFSF4P23510 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
TNFSF4P23510 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
TNFSF4P23510 Y_RNA.100-201ENST00000363141 102 ntBASIC3.43□□□□□ -1.86
TNFSF4P23510 RNU6-522P-201ENST00000364497 107 ntBASIC3.43□□□□□ -1.86
TNFSF4P23510 RNA5SP97-201ENST00000365006 84 ntBASIC3.43□□□□□ -1.86
TNFSF4P23510 CD24P4-201ENST00000382840 243 ntBASIC3.43□□□□□ -1.86
TNFSF4P23510 RNU6-1027P-201ENST00000383998 107 ntBASIC3.43□□□□□ -1.86
TNFSF4P23510 RNU1-13P-201ENST00000384499 162 ntBASIC3.43□□□□□ -1.86
TNFSF4P23510 MIR767-201ENST00000390228 109 ntBASIC3.43□□□□□ -1.86
TNFSF4P23510 RNU6-332P-201ENST00000391193 108 ntBASIC3.43□□□□□ -1.86
TNFSF4P23510 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
TNFSF4P23510 RNA5SP31-201ENST00000411144 127 ntBASIC3.43□□□□□ -1.86
TNFSF4P23510 AL356095.1-201ENST00000417217 199 ntBASIC3.43□□□□□ -1.86
TNFSF4P23510 AC004975.1-201ENST00000428733 208 ntBASIC3.43□□□□□ -1.86
TNFSF4P23510 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.43□□□□□ -1.86
TNFSF4P23510 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.43□□□□□ -1.86
TNFSF4P23510 RPL21P11-201ENST00000461458 483 ntBASIC3.43□□□□□ -1.86
TNFSF4P23510 AC069439.1-201ENST00000494739 167 ntBASIC3.43□□□□□ -1.86
TNFSF4P23510 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.43□□□□□ -1.86
TNFSF4P23510 MTCYBP18-201ENST00000501056 747 ntBASIC3.43□□□□□ -1.86
TNFSF4P23510 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.43□□□□□ -1.86
TNFSF4P23510 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.43□□□□□ -1.86
TNFSF4P23510 IGKV2-38-201ENST00000517443 247 ntBASIC3.43□□□□□ -1.86
TNFSF4P23510 NARSP2-201ENST00000518524 679 ntBASIC3.43□□□□□ -1.86
TNFSF4P23510 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.43□□□□□ -1.86
TNFSF4P23510 MIR4286-201ENST00000580651 93 ntBASIC3.43□□□□□ -1.86
TNFSF4P23510 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.43□□□□□ -1.86
TNFSF4P23510 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.43□□□□□ -1.86
TNFSF4P23510 MIR6867-201ENST00000610636 67 ntBASIC3.43□□□□□ -1.86
TNFSF4P23510 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
TNFSF4P23510 MIR7151-201ENST00000617477 60 ntBASIC3.43□□□□□ -1.86
TNFSF4P23510 AC006504.8-201ENST00000621046 635 ntBASIC3.43□□□□□ -1.86
TNFSF4P23510 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TNFSF4P23510 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
TNFSF4P23510 RLIMP1-201ENST00000339626 1680 ntBASIC3.43□□□□□ -1.86
TNFSF4P23510 CDC27P3-201ENST00000635418 1910 ntBASIC3.42□□□□□ -1.86
TNFSF4P23510 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.42□□□□□ -1.86
TNFSF4P23510 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
TNFSF4P23510 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.42□□□□□ -1.86
TNFSF4P23510 MIR423-201ENST00000362201 94 ntBASIC3.42□□□□□ -1.86
TNFSF4P23510 RNA5SP322-201ENST00000363617 119 ntBASIC3.42□□□□□ -1.86
TNFSF4P23510 U3.12-201ENST00000364498 214 ntBASIC3.42□□□□□ -1.86
TNFSF4P23510 RNA5SP515-201ENST00000364570 118 ntBASIC3.42□□□□□ -1.86
TNFSF4P23510 RNU6-1303P-201ENST00000364841 107 ntBASIC3.42□□□□□ -1.86
TNFSF4P23510 Y_RNA.324-201ENST00000365165 102 ntBASIC3.42□□□□□ -1.86
TNFSF4P23510 RNU1-89P-201ENST00000384592 164 ntBASIC3.42□□□□□ -1.86
TNFSF4P23510 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
TNFSF4P23510 RNA5SP354-201ENST00000391247 136 ntBASIC3.42□□□□□ -1.86
TNFSF4P23510 EIF4E2P1-201ENST00000393781 255 ntBASIC3.42□□□□□ -1.86
TNFSF4P23510 SNORA3C-201ENST00000408792 125 ntBASIC3.42□□□□□ -1.86
TNFSF4P23510 AC023141.4-201ENST00000412031 328 ntBASIC3.42□□□□□ -1.86
TNFSF4P23510 AC096649.2-201ENST00000416186 393 ntBASIC3.42□□□□□ -1.86
TNFSF4P23510 AL139413.1-201ENST00000421309 217 ntBASIC3.42□□□□□ -1.86
TNFSF4P23510 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.42□□□□□ -1.86
TNFSF4P23510 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.42□□□□□ -1.86
TNFSF4P23510 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.42□□□□□ -1.86
TNFSF4P23510 WASF1P1-201ENST00000447560 1131 ntBASIC3.42□□□□□ -1.86
TNFSF4P23510 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.42□□□□□ -1.86
TNFSF4P23510 AC103987.1-201ENST00000473394 348 ntBASIC3.42□□□□□ -1.86
TNFSF4P23510 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.42□□□□□ -1.86
TNFSF4P23510 AC113155.1-201ENST00000511141 769 ntBASIC3.42□□□□□ -1.86
TNFSF4P23510 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.42□□□□□ -1.86
TNFSF4P23510 SNORA14.1-201ENST00000516113 141 ntBASIC3.42□□□□□ -1.86
TNFSF4P23510 SNORD19.2-201ENST00000516978 73 ntBASIC3.42□□□□□ -1.86
TNFSF4P23510 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.42□□□□□ -1.86
TNFSF4P23510 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.42□□□□□ -1.86
TNFSF4P23510 OR8R1P-201ENST00000543943 764 ntBASIC3.42□□□□□ -1.86
TNFSF4P23510 AC120057.2-201ENST00000571520 271 ntBASIC3.42□□□□□ -1.86
TNFSF4P23510 SNORA51-201ENST00000606420 132 ntBASIC3.42□□□□□ -1.86
TNFSF4P23510 MIR6868-201ENST00000611215 58 ntBASIC3.42□□□□□ -1.86
TNFSF4P23510 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.42□□□□□ -1.86
TNFSF4P23510 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.42□□□□□ -1.86
TNFSF4P23510 SCARNA4-202ENST00000625402 129 ntBASIC3.42□□□□□ -1.86
TNFSF4P23510 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
TNFSF4P23510 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.42□□□□□ -1.86
TNFSF4P23510 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
TNFSF4P23510 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.42□□□□□ -1.86
TNFSF4P23510 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.41□□□□□ -1.86
TNFSF4P23510 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TNFSF4P23510 MAPK10-362ENST00000641864 4484 ntBASIC3.41□□□□□ -1.86
TNFSF4P23510 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
TNFSF4P23510 RNU6-266P-201ENST00000364225 107 ntBASIC3.41□□□□□ -1.86
TNFSF4P23510 RNU6-1283P-201ENST00000365314 105 ntBASIC3.41□□□□□ -1.86
TNFSF4P23510 RNU6-898P-201ENST00000365627 104 ntBASIC3.41□□□□□ -1.86
TNFSF4P23510 MIR518D-201ENST00000385014 87 ntBASIC3.41□□□□□ -1.86
TNFSF4P23510 FGF7P8-201ENST00000402994 292 ntBASIC3.41□□□□□ -1.86
TNFSF4P23510 U3.37-201ENST00000408528 213 ntBASIC3.41□□□□□ -1.86
TNFSF4P23510 RNU4-6P-201ENST00000410804 122 ntBASIC3.41□□□□□ -1.86
TNFSF4P23510 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.41□□□□□ -1.86
TNFSF4P23510 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.41□□□□□ -1.86
TNFSF4P23510 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.41□□□□□ -1.86
TNFSF4P23510 AL117339.2-201ENST00000430475 180 ntBASIC3.41□□□□□ -1.86
TNFSF4P23510 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.41□□□□□ -1.86
TNFSF4P23510 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.41□□□□□ -1.86
TNFSF4P23510 HMGB1P31-201ENST00000437242 427 ntBASIC3.41□□□□□ -1.86
TNFSF4P23510 NIPA2P5-201ENST00000452282 464 ntBASIC3.41□□□□□ -1.86
TNFSF4P23510 AL590639.1-201ENST00000456484 337 ntBASIC3.41□□□□□ -1.86
TNFSF4P23510 AC007547.1-201ENST00000462177 490 ntBASIC3.41□□□□□ -1.86
TNFSF4P23510 Y_RNA.665-201ENST00000516177 98 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms