Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 RNU6-1176P-201ENST00000390955 107 ntBASIC1.97□□□□□ -2.09
USF1P22415 RNU4-72P-201ENST00000410754 173 ntBASIC1.97□□□□□ -2.09
USF1P22415 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.97□□□□□ -2.09
USF1P22415 AC092648.1-201ENST00000425870 423 ntBASIC1.97□□□□□ -2.09
USF1P22415 ISCA1P1-201ENST00000426679 387 ntBASIC1.97□□□□□ -2.09
USF1P22415 AL445669.1-201ENST00000426743 755 ntBASIC1.97□□□□□ -2.09
USF1P22415 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.97□□□□□ -2.09
USF1P22415 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.97□□□□□ -2.09
USF1P22415 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.97□□□□□ -2.09
USF1P22415 AC096638.1-201ENST00000444678 216 ntBASIC1.97□□□□□ -2.09
USF1P22415 HMGN2P10-201ENST00000448085 265 ntBASIC1.97□□□□□ -2.09
USF1P22415 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.97□□□□□ -2.09
USF1P22415 FABP5P15-201ENST00000453566 214 ntBASIC1.97□□□□□ -2.09
USF1P22415 AC055855.1-201ENST00000489563 579 ntBASIC1.97□□□□□ -2.09
USF1P22415 GZMAP1-201ENST00000503054 631 ntBASIC1.97□□□□□ -2.09
USF1P22415 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.97□□□□□ -2.09
USF1P22415 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.97□□□□□ -2.09
USF1P22415 RNU6-64P-201ENST00000517119 105 ntBASIC1.97□□□□□ -2.09
USF1P22415 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.97□□□□□ -2.09
USF1P22415 RANP3-201ENST00000530970 276 ntBASIC1.97□□□□□ -2.09
USF1P22415 AC010186.2-204ENST00000537668 439 ntBASIC1.97□□□□□ -2.09
USF1P22415 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
USF1P22415 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.97□□□□□ -2.09
USF1P22415 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.97□□□□□ -2.09
USF1P22415 AC121758.2-201ENST00000553271 193 ntBASIC1.97□□□□□ -2.09
USF1P22415 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.97□□□□□ -2.09
USF1P22415 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.97□□□□□ -2.09
USF1P22415 AC136618.2-201ENST00000575091 400 ntBASIC1.97□□□□□ -2.09
USF1P22415 MIR4769-201ENST00000584126 77 ntBASIC1.97□□□□□ -2.09
USF1P22415 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.97□□□□□ -2.09
USF1P22415 RPS15AP11-201ENST00000594193 385 ntBASIC1.97□□□□□ -2.09
USF1P22415 AC005261.5-201ENST00000596280 355 ntBASIC1.97□□□□□ -2.09
USF1P22415 VN1R82P-201ENST00000601481 356 ntBASIC1.97□□□□□ -2.09
USF1P22415 AC068790.3-201ENST00000602988 553 ntBASIC1.97□□□□□ -2.09
USF1P22415 AC008121.1-201ENST00000603244 268 ntBASIC1.97□□□□□ -2.09
USF1P22415 AL021997.1-201ENST00000605757 193 ntBASIC1.97□□□□□ -2.09
USF1P22415 RNU4-5P-201ENST00000607255 135 ntBASIC1.97□□□□□ -2.09
USF1P22415 AC097468.3-201ENST00000607956 456 ntBASIC1.97□□□□□ -2.09
USF1P22415 AC009159.1-201ENST00000618386 642 ntBASIC1.97□□□□□ -2.09
USF1P22415 AC099654.9-201ENST00000637055 678 ntBASIC1.97□□□□□ -2.09
USF1P22415 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.97□□□□□ -2.09
USF1P22415 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
USF1P22415 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.96□□□□□ -2.09
USF1P22415 ADAM3A-203ENST00000461344 2157 ntBASIC1.96□□□□□ -2.1
USF1P22415 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.96□□□□□ -2.1
USF1P22415 UBE2L2-201ENST00000254302 429 ntBASIC1.96□□□□□ -2.1
USF1P22415 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
USF1P22415 RPL21P132-201ENST00000331267 462 ntBASIC1.96□□□□□ -2.1
USF1P22415 RNU6-1284P-201ENST00000363701 100 ntBASIC1.96□□□□□ -2.1
USF1P22415 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
USF1P22415 PIGPP2-201ENST00000411569 458 ntBASIC1.96□□□□□ -2.1
USF1P22415 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.96□□□□□ -2.1
USF1P22415 AL353729.1-201ENST00000425044 720 ntBASIC1.96□□□□□ -2.1
USF1P22415 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.96□□□□□ -2.1
USF1P22415 RPL36AP53-201ENST00000432891 316 ntBASIC1.96□□□□□ -2.1
USF1P22415 PGBD4P3-201ENST00000440731 581 ntBASIC1.96□□□□□ -2.1
USF1P22415 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.96□□□□□ -2.1
USF1P22415 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
USF1P22415 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.96□□□□□ -2.1
USF1P22415 RPF2P2-201ENST00000504693 896 ntBASIC1.96□□□□□ -2.1
USF1P22415 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
USF1P22415 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.96□□□□□ -2.1
USF1P22415 SNORA31.3-201ENST00000516029 96 ntBASIC1.96□□□□□ -2.1
USF1P22415 RNU6-703P-201ENST00000516946 107 ntBASIC1.96□□□□□ -2.1
USF1P22415 AC068587.4-201ENST00000533893 186 ntBASIC1.96□□□□□ -2.1
USF1P22415 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.96□□□□□ -2.1
USF1P22415 AC026464.5-201ENST00000562497 722 ntBASIC1.96□□□□□ -2.1
USF1P22415 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.96□□□□□ -2.1
USF1P22415 AC009127.3-201ENST00000570531 403 ntBASIC1.96□□□□□ -2.1
USF1P22415 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.96□□□□□ -2.1
USF1P22415 MIR4293-201ENST00000584305 78 ntBASIC1.96□□□□□ -2.1
USF1P22415 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.96□□□□□ -2.1
USF1P22415 RPP40P2-201ENST00000603596 712 ntBASIC1.96□□□□□ -2.1
USF1P22415 AC025588.2-201ENST00000604851 466 ntBASIC1.96□□□□□ -2.1
USF1P22415 AL158042.1-201ENST00000605338 460 ntBASIC1.96□□□□□ -2.1
USF1P22415 AC005332.10-201ENST00000612725 619 ntBASIC1.96□□□□□ -2.1
USF1P22415 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.96□□□□□ -2.1
USF1P22415 AC010678.1-201ENST00000614118 713 ntBASIC1.96□□□□□ -2.1
USF1P22415 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.96□□□□□ -2.1
USF1P22415 AC104454.1-201ENST00000421341 1401 ntBASIC1.96□□□□□ -2.1
USF1P22415 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
USF1P22415 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
USF1P22415 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
USF1P22415 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
USF1P22415 MTND4P35-201ENST00000604257 1375 ntBASIC1.96□□□□□ -2.1
USF1P22415 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
USF1P22415 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.95□□□□□ -2.1
USF1P22415 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
USF1P22415 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
USF1P22415 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
USF1P22415 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
USF1P22415 RNU6-512P-201ENST00000364438 103 ntBASIC1.95□□□□□ -2.1
USF1P22415 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
USF1P22415 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
USF1P22415 MIR218-1-201ENST00000384999 110 ntBASIC1.95□□□□□ -2.1
USF1P22415 RNU4-26P-201ENST00000410270 107 ntBASIC1.95□□□□□ -2.1
USF1P22415 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.95□□□□□ -2.1
USF1P22415 ZNF90P2-204ENST00000419323 1075 ntBASIC1.95□□□□□ -2.1
USF1P22415 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.95□□□□□ -2.1
USF1P22415 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms