Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDH3P22223 SMIM11P1-201ENST00000369586 178 ntBASIC2.94□□□□□ -1.94
CDH3P22223 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.94□□□□□ -1.94
CDH3P22223 RNU6-14P-201ENST00000384630 106 ntBASIC2.94□□□□□ -1.94
CDH3P22223 UBA52P6-201ENST00000399822 382 ntBASIC2.94□□□□□ -1.94
CDH3P22223 BX682237.1-201ENST00000415016 335 ntBASIC2.94□□□□□ -1.94
CDH3P22223 AL513477.1-202ENST00000417061 214 ntBASIC2.94□□□□□ -1.94
CDH3P22223 ZNF90P2-204ENST00000419323 1075 ntBASIC2.94□□□□□ -1.94
CDH3P22223 AC133104.1-201ENST00000429100 218 ntBASIC2.94□□□□□ -1.94
CDH3P22223 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.94□□□□□ -1.94
CDH3P22223 AC092573.2-201ENST00000434546 243 ntBASIC2.94□□□□□ -1.94
CDH3P22223 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.94□□□□□ -1.94
CDH3P22223 AC009237.8-201ENST00000445492 379 ntBASIC2.94□□□□□ -1.94
CDH3P22223 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.94□□□□□ -1.94
CDH3P22223 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.94□□□□□ -1.94
CDH3P22223 AP004217.1-201ENST00000480579 346 ntBASIC2.94□□□□□ -1.94
CDH3P22223 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.94□□□□□ -1.94
CDH3P22223 SEM1P1-201ENST00000506694 209 ntBASIC2.94□□□□□ -1.94
CDH3P22223 RPL37P25-201ENST00000507308 276 ntBASIC2.94□□□□□ -1.94
CDH3P22223 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.94□□□□□ -1.94
CDH3P22223 AC006445.2-201ENST00000510061 472 ntBASIC2.94□□□□□ -1.94
CDH3P22223 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.94□□□□□ -1.94
CDH3P22223 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.94□□□□□ -1.94
CDH3P22223 SNORA31.3-201ENST00000516029 96 ntBASIC2.94□□□□□ -1.94
CDH3P22223 RNU6-927P-201ENST00000516199 100 ntBASIC2.94□□□□□ -1.94
CDH3P22223 RNU7-51P-201ENST00000516560 62 ntBASIC2.94□□□□□ -1.94
CDH3P22223 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
CDH3P22223 HMGB1P41-201ENST00000520234 440 ntBASIC2.94□□□□□ -1.94
CDH3P22223 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.94□□□□□ -1.94
CDH3P22223 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.94□□□□□ -1.94
CDH3P22223 AC022880.1-201ENST00000534017 973 ntBASIC2.94□□□□□ -1.94
CDH3P22223 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.94□□□□□ -1.94
CDH3P22223 RPS3AP4-201ENST00000555161 764 ntBASIC2.94□□□□□ -1.94
CDH3P22223 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.94□□□□□ -1.94
CDH3P22223 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.94□□□□□ -1.94
CDH3P22223 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.94□□□□□ -1.94
CDH3P22223 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CDH3P22223 MTND5P26-201ENST00000426018 1752 ntBASIC2.93□□□□□ -1.94
CDH3P22223 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CDH3P22223 Y_RNA.41-201ENST00000362646 102 ntBASIC2.93□□□□□ -1.94
CDH3P22223 RNY1P12-201ENST00000364251 105 ntBASIC2.93□□□□□ -1.94
CDH3P22223 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CDH3P22223 Y_RNA.517-201ENST00000384551 106 ntBASIC2.93□□□□□ -1.94
CDH3P22223 MIR558-201ENST00000384920 94 ntBASIC2.93□□□□□ -1.94
CDH3P22223 SNORD88.1-201ENST00000408684 91 ntBASIC2.93□□□□□ -1.94
CDH3P22223 RNU2-25P-201ENST00000411041 191 ntBASIC2.93□□□□□ -1.94
CDH3P22223 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.93□□□□□ -1.94
CDH3P22223 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.93□□□□□ -1.94
CDH3P22223 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.93□□□□□ -1.94
CDH3P22223 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.93□□□□□ -1.94
CDH3P22223 AC104651.1-201ENST00000427559 735 ntBASIC2.93□□□□□ -1.94
CDH3P22223 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.93□□□□□ -1.94
CDH3P22223 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.93□□□□□ -1.94
CDH3P22223 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.93□□□□□ -1.94
CDH3P22223 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.93□□□□□ -1.94
CDH3P22223 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.93□□□□□ -1.94
CDH3P22223 RPS20P22-201ENST00000473700 357 ntBASIC2.93□□□□□ -1.94
CDH3P22223 RPS27AP9-201ENST00000477681 438 ntBASIC2.93□□□□□ -1.94
CDH3P22223 AL135752.1-201ENST00000479477 471 ntBASIC2.93□□□□□ -1.94
CDH3P22223 RN7SL432P-201ENST00000484057 298 ntBASIC2.93□□□□□ -1.94
CDH3P22223 RPL30P5-201ENST00000494923 336 ntBASIC2.93□□□□□ -1.94
CDH3P22223 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.93□□□□□ -1.94
CDH3P22223 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.93□□□□□ -1.94
CDH3P22223 RN7SKP43-201ENST00000516173 320 ntBASIC2.93□□□□□ -1.94
CDH3P22223 AP003072.2-201ENST00000527756 676 ntBASIC2.93□□□□□ -1.94
CDH3P22223 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.93□□□□□ -1.94
CDH3P22223 AC023043.3-201ENST00000593113 385 ntBASIC2.93□□□□□ -1.94
CDH3P22223 AC068790.2-201ENST00000602601 557 ntBASIC2.93□□□□□ -1.94
CDH3P22223 AL670379.6-201ENST00000603753 252 ntBASIC2.93□□□□□ -1.94
CDH3P22223 AL670379.11-201ENST00000604059 253 ntBASIC2.93□□□□□ -1.94
CDH3P22223 AL022154.1-201ENST00000604698 785 ntBASIC2.93□□□□□ -1.94
CDH3P22223 AC008162.1-201ENST00000604718 254 ntBASIC2.93□□□□□ -1.94
CDH3P22223 AL670379.1-201ENST00000604752 252 ntBASIC2.93□□□□□ -1.94
CDH3P22223 AL670379.5-201ENST00000605253 252 ntBASIC2.93□□□□□ -1.94
CDH3P22223 AL670379.12-201ENST00000605291 253 ntBASIC2.93□□□□□ -1.94
CDH3P22223 AL670379.8-201ENST00000605353 252 ntBASIC2.93□□□□□ -1.94
CDH3P22223 AL670379.7-201ENST00000605823 252 ntBASIC2.93□□□□□ -1.94
CDH3P22223 AC110079.1-202ENST00000635213 138 ntBASIC2.93□□□□□ -1.94
CDH3P22223 AC008669.1-201ENST00000565823 2178 ntBASIC2.93□□□□□ -1.94
CDH3P22223 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
CDH3P22223 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CDH3P22223 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
CDH3P22223 AC007785.2-201ENST00000598627 1916 ntBASIC2.92□□□□□ -1.94
CDH3P22223 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
CDH3P22223 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CDH3P22223 RNU6-181P-201ENST00000363225 107 ntBASIC2.92□□□□□ -1.94
CDH3P22223 RNU6-960P-201ENST00000364056 120 ntBASIC2.92□□□□□ -1.94
CDH3P22223 RNU6-259P-201ENST00000383999 107 ntBASIC2.92□□□□□ -1.94
CDH3P22223 RNU6-1042P-201ENST00000384204 107 ntBASIC2.92□□□□□ -1.94
CDH3P22223 SNORA54-201ENST00000384281 123 ntBASIC2.92□□□□□ -1.94
CDH3P22223 MIR325-201ENST00000385260 98 ntBASIC2.92□□□□□ -1.94
CDH3P22223 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.92□□□□□ -1.94
CDH3P22223 AL590383.1-201ENST00000428602 75 ntBASIC2.92□□□□□ -1.94
CDH3P22223 MTCO2P11-201ENST00000431069 680 ntBASIC2.92□□□□□ -1.94
CDH3P22223 RPL23AP30-201ENST00000432419 501 ntBASIC2.92□□□□□ -1.94
CDH3P22223 DNAJC19P4-201ENST00000440115 345 ntBASIC2.92□□□□□ -1.94
CDH3P22223 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.92□□□□□ -1.94
CDH3P22223 AC010099.1-201ENST00000455434 375 ntBASIC2.92□□□□□ -1.94
CDH3P22223 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.92□□□□□ -1.94
CDH3P22223 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms