Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.9□□□□□ -1.63
LIG1P18858 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.9□□□□□ -1.63
LIG1P18858 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
LIG1P18858 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
LIG1P18858 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LIG1P18858 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
LIG1P18858 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LIG1P18858 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.89□□□□□ -1.63
LIG1P18858 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.89□□□□□ -1.63
LIG1P18858 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.89□□□□□ -1.63
LIG1P18858 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.89□□□□□ -1.63
LIG1P18858 AC032011.1-201ENST00000611703 1549 ntBASIC4.89□□□□□ -1.63
LIG1P18858 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
LIG1P18858 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LIG1P18858 AC138393.1-203ENST00000327086 343 ntBASIC4.89□□□□□ -1.63
LIG1P18858 Y_RNA.210-201ENST00000364161 110 ntBASIC4.89□□□□□ -1.63
LIG1P18858 SNORD14.1-201ENST00000365609 90 ntBASIC4.89□□□□□ -1.63
LIG1P18858 RNU6-472P-201ENST00000384299 107 ntBASIC4.89□□□□□ -1.63
LIG1P18858 RPL21P1-201ENST00000399532 476 ntBASIC4.89□□□□□ -1.63
LIG1P18858 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.89□□□□□ -1.63
LIG1P18858 RNU2-64P-201ENST00000411315 191 ntBASIC4.89□□□□□ -1.63
LIG1P18858 ELOCP19-201ENST00000411919 318 ntBASIC4.89□□□□□ -1.63
LIG1P18858 SYF2P2-201ENST00000417620 583 ntBASIC4.89□□□□□ -1.63
LIG1P18858 PGBD4P6-201ENST00000421501 610 ntBASIC4.89□□□□□ -1.63
LIG1P18858 PPP1R11P2-201ENST00000423543 382 ntBASIC4.89□□□□□ -1.63
LIG1P18858 AL162151.2-201ENST00000448875 158 ntBASIC4.89□□□□□ -1.63
LIG1P18858 SUMO1P2-201ENST00000452524 304 ntBASIC4.89□□□□□ -1.63
LIG1P18858 AC011005.2-201ENST00000487324 359 ntBASIC4.89□□□□□ -1.63
LIG1P18858 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.89□□□□□ -1.63
LIG1P18858 SNORA70.14-201ENST00000516205 110 ntBASIC4.89□□□□□ -1.63
LIG1P18858 SNORA40.14-201ENST00000516543 86 ntBASIC4.89□□□□□ -1.63
LIG1P18858 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.89□□□□□ -1.63
LIG1P18858 OR5D17P-201ENST00000531492 978 ntBASIC4.89□□□□□ -1.63
LIG1P18858 AC023157.2-201ENST00000540596 141 ntBASIC4.89□□□□□ -1.63
LIG1P18858 AC026470.2-201ENST00000561492 181 ntBASIC4.89□□□□□ -1.63
LIG1P18858 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.89□□□□□ -1.63
LIG1P18858 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
LIG1P18858 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.89□□□□□ -1.63
LIG1P18858 ELOCP5-201ENST00000604924 333 ntBASIC4.89□□□□□ -1.63
LIG1P18858 ARF4P1-201ENST00000605447 541 ntBASIC4.89□□□□□ -1.63
LIG1P18858 AL365434.2-201ENST00000607979 234 ntBASIC4.89□□□□□ -1.63
LIG1P18858 MIR6810-201ENST00000622701 70 ntBASIC4.89□□□□□ -1.63
LIG1P18858 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LIG1P18858 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LIG1P18858 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.89□□□□□ -1.63
LIG1P18858 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LIG1P18858 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
LIG1P18858 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LIG1P18858 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.88□□□□□ -1.63
LIG1P18858 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LIG1P18858 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LIG1P18858 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.88□□□□□ -1.63
LIG1P18858 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.88□□□□□ -1.63
LIG1P18858 Y_RNA.126-201ENST00000363382 111 ntBASIC4.88□□□□□ -1.63
LIG1P18858 Y_RNA.151-201ENST00000363566 112 ntBASIC4.88□□□□□ -1.63
LIG1P18858 Y_RNA.276-201ENST00000364732 109 ntBASIC4.88□□□□□ -1.63
LIG1P18858 SNORA37-201ENST00000384504 129 ntBASIC4.88□□□□□ -1.63
LIG1P18858 RNU2-37P-201ENST00000410695 177 ntBASIC4.88□□□□□ -1.63
LIG1P18858 RPL7P2-201ENST00000427639 268 ntBASIC4.88□□□□□ -1.63
LIG1P18858 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.88□□□□□ -1.63
LIG1P18858 AC073063.1-201ENST00000434352 607 ntBASIC4.88□□□□□ -1.63
LIG1P18858 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.88□□□□□ -1.63
LIG1P18858 RPS24P6-201ENST00000452670 400 ntBASIC4.88□□□□□ -1.63
LIG1P18858 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.88□□□□□ -1.63
LIG1P18858 RN7SL585P-201ENST00000470538 280 ntBASIC4.88□□□□□ -1.63
LIG1P18858 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.88□□□□□ -1.63
LIG1P18858 RPL17P19-201ENST00000489069 552 ntBASIC4.88□□□□□ -1.63
LIG1P18858 AC114801.2-201ENST00000503825 781 ntBASIC4.88□□□□□ -1.63
LIG1P18858 AC069113.1-201ENST00000517763 267 ntBASIC4.88□□□□□ -1.63
LIG1P18858 AC006064.5-201ENST00000541782 248 ntBASIC4.88□□□□□ -1.63
LIG1P18858 OR4H12P-201ENST00000556269 907 ntBASIC4.88□□□□□ -1.63
LIG1P18858 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.88□□□□□ -1.63
LIG1P18858 AC109446.1-201ENST00000566172 220 ntBASIC4.88□□□□□ -1.63
LIG1P18858 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.88□□□□□ -1.63
LIG1P18858 AC125232.2-201ENST00000592457 143 ntBASIC4.88□□□□□ -1.63
LIG1P18858 AL021997.2-201ENST00000615674 271 ntBASIC4.88□□□□□ -1.63
LIG1P18858 MIR4272-201ENST00000635924 64 ntBASIC4.88□□□□□ -1.63
LIG1P18858 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LIG1P18858 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
LIG1P18858 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
LIG1P18858 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LIG1P18858 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LIG1P18858 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LIG1P18858 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LIG1P18858 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LIG1P18858 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LIG1P18858 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.87□□□□□ -1.63
LIG1P18858 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LIG1P18858 MFSD8-242ENST00000641690 4199 ntBASIC4.87□□□□□ -1.63
LIG1P18858 MIR331-201ENST00000362302 94 ntBASIC4.87□□□□□ -1.63
LIG1P18858 SNORA31-201ENST00000362607 130 ntBASIC4.87□□□□□ -1.63
LIG1P18858 RNA5SP509-201ENST00000364577 119 ntBASIC4.87□□□□□ -1.63
LIG1P18858 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.87□□□□□ -1.63
LIG1P18858 Y_RNA.577-201ENST00000384794 101 ntBASIC4.87□□□□□ -1.63
LIG1P18858 RNU6-174P-201ENST00000410406 106 ntBASIC4.87□□□□□ -1.63
LIG1P18858 AL158071.1-201ENST00000430315 461 ntBASIC4.87□□□□□ -1.63
LIG1P18858 ARL5AP4-201ENST00000430731 512 ntBASIC4.87□□□□□ -1.63
LIG1P18858 SUMO1P3-201ENST00000439961 304 ntBASIC4.87□□□□□ -1.63
LIG1P18858 RPL21P2-201ENST00000440049 481 ntBASIC4.87□□□□□ -1.63
LIG1P18858 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms