Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 MIR5696-201ENST00000578474 85 ntBASIC4.14□□□□□ -1.75
ATF4P18848 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.14□□□□□ -1.75
ATF4P18848 AC008737.2-201ENST00000599446 118 ntBASIC4.14□□□□□ -1.75
ATF4P18848 AC019159.1-201ENST00000605094 187 ntBASIC4.14□□□□□ -1.75
ATF4P18848 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.14□□□□□ -1.75
ATF4P18848 AC005014.2-201ENST00000607795 599 ntBASIC4.14□□□□□ -1.75
ATF4P18848 AC244107.2-201ENST00000611773 76 ntBASIC4.14□□□□□ -1.75
ATF4P18848 AC007485.1-201ENST00000616755 206 ntBASIC4.14□□□□□ -1.75
ATF4P18848 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.14□□□□□ -1.75
ATF4P18848 MIR7154-201ENST00000620673 73 ntBASIC4.14□□□□□ -1.75
ATF4P18848 MIR6837-201ENST00000620884 64 ntBASIC4.14□□□□□ -1.75
ATF4P18848 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.14□□□□□ -1.75
ATF4P18848 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.14□□□□□ -1.75
ATF4P18848 AC241585.2-209ENST00000638217 143 ntBASIC4.14□□□□□ -1.75
ATF4P18848 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ATF4P18848 AC007496.3-201ENST00000624987 3443 ntBASIC4.14□□□□□ -1.75
ATF4P18848 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ATF4P18848 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.14□□□□□ -1.75
ATF4P18848 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
ATF4P18848 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
ATF4P18848 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
ATF4P18848 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
ATF4P18848 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.13□□□□□ -1.75
ATF4P18848 AC010680.1-201ENST00000590024 3590 ntBASIC4.13□□□□□ -1.75
ATF4P18848 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATF4P18848 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATF4P18848 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ATF4P18848 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
ATF4P18848 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATF4P18848 U3.3-201ENST00000362986 216 ntBASIC4.13□□□□□ -1.75
ATF4P18848 Y_RNA.123-201ENST00000363338 102 ntBASIC4.13□□□□□ -1.75
ATF4P18848 Y_RNA.158-201ENST00000363651 101 ntBASIC4.13□□□□□ -1.75
ATF4P18848 RNU6-784P-201ENST00000384330 106 ntBASIC4.13□□□□□ -1.75
ATF4P18848 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
ATF4P18848 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.13□□□□□ -1.75
ATF4P18848 BX510359.3-201ENST00000422168 306 ntBASIC4.13□□□□□ -1.75
ATF4P18848 AL133173.1-201ENST00000423458 397 ntBASIC4.13□□□□□ -1.75
ATF4P18848 AL161651.1-201ENST00000440882 223 ntBASIC4.13□□□□□ -1.75
ATF4P18848 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.13□□□□□ -1.75
ATF4P18848 AC034236.1-201ENST00000469891 373 ntBASIC4.13□□□□□ -1.75
ATF4P18848 MED28P2-201ENST00000475771 317 ntBASIC4.13□□□□□ -1.75
ATF4P18848 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.13□□□□□ -1.75
ATF4P18848 AC073073.1-201ENST00000493920 463 ntBASIC4.13□□□□□ -1.75
ATF4P18848 RNU5F-8P-201ENST00000515941 111 ntBASIC4.13□□□□□ -1.75
ATF4P18848 RNU7-4P-201ENST00000516961 62 ntBASIC4.13□□□□□ -1.75
ATF4P18848 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.13□□□□□ -1.75
ATF4P18848 GNAI2P1-201ENST00000541815 315 ntBASIC4.13□□□□□ -1.75
ATF4P18848 AC069240.1-201ENST00000548774 375 ntBASIC4.13□□□□□ -1.75
ATF4P18848 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.13□□□□□ -1.75
ATF4P18848 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.13□□□□□ -1.75
ATF4P18848 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.13□□□□□ -1.75
ATF4P18848 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.13□□□□□ -1.75
ATF4P18848 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.13□□□□□ -1.75
ATF4P18848 AC012616.1-201ENST00000600294 197 ntBASIC4.13□□□□□ -1.75
ATF4P18848 AC092447.9-201ENST00000603395 144 ntBASIC4.13□□□□□ -1.75
ATF4P18848 AC091925.1-201ENST00000623204 462 ntBASIC4.13□□□□□ -1.75
ATF4P18848 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ATF4P18848 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATF4P18848 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ATF4P18848 MAPK10-372ENST00000641954 3413 ntBASIC4.12□□□□□ -1.75
ATF4P18848 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ATF4P18848 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ATF4P18848 MTND4P1-201ENST00000457501 1466 ntBASIC4.12□□□□□ -1.75
ATF4P18848 AC009541.1-201ENST00000438279 2662 ntBASIC4.12□□□□□ -1.75
ATF4P18848 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ATF4P18848 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
ATF4P18848 HAUS6P2-201ENST00000433254 2404 ntBASIC4.12□□□□□ -1.75
ATF4P18848 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
ATF4P18848 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ATF4P18848 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.12□□□□□ -1.75
ATF4P18848 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
ATF4P18848 Y_RNA.39-201ENST00000362620 98 ntBASIC4.12□□□□□ -1.75
ATF4P18848 RN7SKP162-201ENST00000363605 345 ntBASIC4.12□□□□□ -1.75
ATF4P18848 RNU6-99P-201ENST00000364721 107 ntBASIC4.12□□□□□ -1.75
ATF4P18848 MIR625-201ENST00000385047 85 ntBASIC4.12□□□□□ -1.75
ATF4P18848 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
ATF4P18848 RNU6-1156P-201ENST00000410365 100 ntBASIC4.12□□□□□ -1.75
ATF4P18848 AC007098.1-201ENST00000420122 367 ntBASIC4.12□□□□□ -1.75
ATF4P18848 CKS1BP6-201ENST00000424932 240 ntBASIC4.12□□□□□ -1.75
ATF4P18848 RPL7P2-201ENST00000427639 268 ntBASIC4.12□□□□□ -1.75
ATF4P18848 AL160004.2-201ENST00000432935 350 ntBASIC4.12□□□□□ -1.75
ATF4P18848 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.12□□□□□ -1.75
ATF4P18848 GSTA11P-201ENST00000452866 669 ntBASIC4.12□□□□□ -1.75
ATF4P18848 AL441985.1-201ENST00000457727 251 ntBASIC4.12□□□□□ -1.75
ATF4P18848 COPS8P2-201ENST00000473228 627 ntBASIC4.12□□□□□ -1.75
ATF4P18848 HMGN1P10-201ENST00000474557 553 ntBASIC4.12□□□□□ -1.75
ATF4P18848 OR2AO1P-201ENST00000476497 403 ntBASIC4.12□□□□□ -1.75
ATF4P18848 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.12□□□□□ -1.75
ATF4P18848 ENPP7P9-201ENST00000514456 627 ntBASIC4.12□□□□□ -1.75
ATF4P18848 RNA5SP34-201ENST00000516887 130 ntBASIC4.12□□□□□ -1.75
ATF4P18848 SNORD19.2-201ENST00000516978 73 ntBASIC4.12□□□□□ -1.75
ATF4P18848 AP000889.1-201ENST00000530968 660 ntBASIC4.12□□□□□ -1.75
ATF4P18848 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.12□□□□□ -1.75
ATF4P18848 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.12□□□□□ -1.75
ATF4P18848 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.12□□□□□ -1.75
ATF4P18848 RN7SL356P-201ENST00000582228 248 ntBASIC4.12□□□□□ -1.75
ATF4P18848 AC024220.1-201ENST00000603675 484 ntBASIC4.12□□□□□ -1.75
ATF4P18848 AL356157.2-201ENST00000605122 111 ntBASIC4.12□□□□□ -1.75
ATF4P18848 AC009318.2-201ENST00000610917 651 ntBASIC4.12□□□□□ -1.75
ATF4P18848 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms