Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 RNU6-512P-201ENST00000364438 103 ntBASIC1.66□□□□□ -2.14
ATF1P18846 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.66□□□□□ -2.14
ATF1P18846 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.66□□□□□ -2.14
ATF1P18846 RPL21P24-201ENST00000413752 448 ntBASIC1.66□□□□□ -2.14
ATF1P18846 Z98742.3-201ENST00000418637 326 ntBASIC1.66□□□□□ -2.14
ATF1P18846 EIF1AXP1-201ENST00000419267 435 ntBASIC1.66□□□□□ -2.14
ATF1P18846 AC096920.1-201ENST00000423991 241 ntBASIC1.66□□□□□ -2.14
ATF1P18846 PTGES3P4-201ENST00000426243 356 ntBASIC1.66□□□□□ -2.14
ATF1P18846 GPM6BP2-201ENST00000432046 144 ntBASIC1.66□□□□□ -2.14
ATF1P18846 RPL36AP53-201ENST00000432891 316 ntBASIC1.66□□□□□ -2.14
ATF1P18846 GPM6BP1-201ENST00000446387 144 ntBASIC1.66□□□□□ -2.14
ATF1P18846 EEF1E1P1-201ENST00000446998 430 ntBASIC1.66□□□□□ -2.14
ATF1P18846 OR6C5P-201ENST00000452388 923 ntBASIC1.66□□□□□ -2.14
ATF1P18846 RPL21P134-201ENST00000453468 483 ntBASIC1.66□□□□□ -2.14
ATF1P18846 PMCHL2-203ENST00000457791 237 ntBASIC1.66□□□□□ -2.14
ATF1P18846 MEMO1P3-201ENST00000459811 302 ntBASIC1.66□□□□□ -2.14
ATF1P18846 AC005410.1-202ENST00000460347 485 ntBASIC1.66□□□□□ -2.14
ATF1P18846 AC107032.1-201ENST00000485945 480 ntBASIC1.66□□□□□ -2.14
ATF1P18846 AC024589.1-201ENST00000512207 263 ntBASIC1.66□□□□□ -2.14
ATF1P18846 RNA5SP112-201ENST00000515937 99 ntBASIC1.66□□□□□ -2.14
ATF1P18846 RNU2-44P-201ENST00000516795 194 ntBASIC1.66□□□□□ -2.14
ATF1P18846 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.66□□□□□ -2.14
ATF1P18846 MTND3P13-201ENST00000574391 343 ntBASIC1.66□□□□□ -2.14
ATF1P18846 AC090079.2-201ENST00000575289 768 ntBASIC1.66□□□□□ -2.14
ATF1P18846 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.66□□□□□ -2.14
ATF1P18846 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.66□□□□□ -2.14
ATF1P18846 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.66□□□□□ -2.14
ATF1P18846 AP001269.3-201ENST00000588718 329 ntBASIC1.66□□□□□ -2.14
ATF1P18846 RPL21P136-201ENST00000605378 396 ntBASIC1.66□□□□□ -2.14
ATF1P18846 AC011939.3-201ENST00000613686 466 ntBASIC1.66□□□□□ -2.14
ATF1P18846 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.66□□□□□ -2.14
ATF1P18846 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.66□□□□□ -2.14
ATF1P18846 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
ATF1P18846 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
ATF1P18846 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.66□□□□□ -2.14
ATF1P18846 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
ATF1P18846 RNU6-748P-201ENST00000384648 107 ntBASIC1.65□□□□□ -2.15
ATF1P18846 MIR676-201ENST00000390702 67 ntBASIC1.65□□□□□ -2.15
ATF1P18846 RNA5SP425-201ENST00000410336 112 ntBASIC1.65□□□□□ -2.15
ATF1P18846 RNU2-20P-201ENST00000410425 191 ntBASIC1.65□□□□□ -2.15
ATF1P18846 DPH3P2-201ENST00000422618 250 ntBASIC1.65□□□□□ -2.15
ATF1P18846 AL953862.1-201ENST00000423016 168 ntBASIC1.65□□□□□ -2.15
ATF1P18846 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.65□□□□□ -2.15
ATF1P18846 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.65□□□□□ -2.15
ATF1P18846 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.65□□□□□ -2.15
ATF1P18846 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.65□□□□□ -2.15
ATF1P18846 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.65□□□□□ -2.15
ATF1P18846 AL353705.4-201ENST00000449661 238 ntBASIC1.65□□□□□ -2.15
ATF1P18846 RNA5SP233-201ENST00000459153 113 ntBASIC1.65□□□□□ -2.15
ATF1P18846 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.65□□□□□ -2.15
ATF1P18846 AC093809.1-201ENST00000509155 340 ntBASIC1.65□□□□□ -2.15
ATF1P18846 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.65□□□□□ -2.15
ATF1P18846 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
ATF1P18846 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.65□□□□□ -2.15
ATF1P18846 AL133153.1-201ENST00000557756 303 ntBASIC1.65□□□□□ -2.15
ATF1P18846 AC233702.2-202ENST00000562547 291 ntBASIC1.65□□□□□ -2.15
ATF1P18846 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.65□□□□□ -2.15
ATF1P18846 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.65□□□□□ -2.15
ATF1P18846 MTCYBP22-201ENST00000603788 447 ntBASIC1.65□□□□□ -2.15
ATF1P18846 AC006270.3-201ENST00000605967 1036 ntBASIC1.65□□□□□ -2.15
ATF1P18846 AC024060.1-201ENST00000607052 494 ntBASIC1.65□□□□□ -2.15
ATF1P18846 AL158211.2-201ENST00000607282 395 ntBASIC1.65□□□□□ -2.15
ATF1P18846 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.65□□□□□ -2.15
ATF1P18846 YWHAEP7-203ENST00000622054 312 ntBASIC1.65□□□□□ -2.15
ATF1P18846 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.65□□□□□ -2.15
ATF1P18846 AC244517.12-201ENST00000623581 663 ntBASIC1.65□□□□□ -2.15
ATF1P18846 AP003400.5-201ENST00000624827 617 ntBASIC1.65□□□□□ -2.15
ATF1P18846 SCARNA15.3-201ENST00000626315 122 ntBASIC1.65□□□□□ -2.15
ATF1P18846 SCARNA4.1-201ENST00000628597 123 ntBASIC1.65□□□□□ -2.15
ATF1P18846 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
ATF1P18846 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
ATF1P18846 AC092881.1-201ENST00000638218 2733 ntBASIC1.64□□□□□ -2.15
ATF1P18846 Z75746.1-201ENST00000440243 2080 ntBASIC1.64□□□□□ -2.15
ATF1P18846 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.64□□□□□ -2.15
ATF1P18846 UBE2L2-201ENST00000254302 429 ntBASIC1.64□□□□□ -2.15
ATF1P18846 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.64□□□□□ -2.15
ATF1P18846 RNU2-2P-201ENST00000410396 191 ntBASIC1.64□□□□□ -2.15
ATF1P18846 RN7SKP223-201ENST00000410582 62 ntBASIC1.64□□□□□ -2.15
ATF1P18846 ISCA1P1-201ENST00000426679 387 ntBASIC1.64□□□□□ -2.15
ATF1P18846 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.64□□□□□ -2.15
ATF1P18846 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.64□□□□□ -2.15
ATF1P18846 AC092001.1-201ENST00000453012 261 ntBASIC1.64□□□□□ -2.15
ATF1P18846 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.64□□□□□ -2.15
ATF1P18846 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.64□□□□□ -2.15
ATF1P18846 AC069306.1-201ENST00000507006 843 ntBASIC1.64□□□□□ -2.15
ATF1P18846 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.64□□□□□ -2.15
ATF1P18846 RN7SKP258-201ENST00000517151 304 ntBASIC1.64□□□□□ -2.15
ATF1P18846 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.64□□□□□ -2.15
ATF1P18846 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.64□□□□□ -2.15
ATF1P18846 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.64□□□□□ -2.15
ATF1P18846 MIR3126-201ENST00000577443 74 ntBASIC1.64□□□□□ -2.15
ATF1P18846 MIR4287-201ENST00000579398 78 ntBASIC1.64□□□□□ -2.15
ATF1P18846 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.64□□□□□ -2.15
ATF1P18846 AL355598.1-201ENST00000604169 202 ntBASIC1.64□□□□□ -2.15
ATF1P18846 AC090186.1-201ENST00000605991 572 ntBASIC1.64□□□□□ -2.15
ATF1P18846 AF129408.1-201ENST00000608767 431 ntBASIC1.64□□□□□ -2.15
ATF1P18846 U2.15-201ENST00000611544 191 ntBASIC1.64□□□□□ -2.15
ATF1P18846 U2.16-201ENST00000613119 191 ntBASIC1.64□□□□□ -2.15
ATF1P18846 U2.12-201ENST00000613778 191 ntBASIC1.64□□□□□ -2.15
ATF1P18846 U2.20-201ENST00000613956 192 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms