Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.98□□□□□ -1.93
HLA-DOBP13765 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.98□□□□□ -1.93
HLA-DOBP13765 AC017071.1-201ENST00000564407 2204 ntBASIC2.98□□□□□ -1.93
HLA-DOBP13765 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
HLA-DOBP13765 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC2.98□□□□□ -1.93
HLA-DOBP13765 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DOBP13765 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DOBP13765 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DOBP13765 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DOBP13765 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DOBP13765 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DOBP13765 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
HLA-DOBP13765 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DOBP13765 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DOBP13765 RNA5SP50-201ENST00000363731 107 ntBASIC2.97□□□□□ -1.93
HLA-DOBP13765 RNU6-116P-201ENST00000384042 109 ntBASIC2.97□□□□□ -1.93
HLA-DOBP13765 RNU6-332P-201ENST00000391193 108 ntBASIC2.97□□□□□ -1.93
HLA-DOBP13765 CISD1P1-201ENST00000393907 327 ntBASIC2.97□□□□□ -1.93
HLA-DOBP13765 RNU4-26P-201ENST00000410270 107 ntBASIC2.97□□□□□ -1.93
HLA-DOBP13765 RNA5SP129-201ENST00000410276 118 ntBASIC2.97□□□□□ -1.93
HLA-DOBP13765 RNA5SP111-201ENST00000411386 101 ntBASIC2.97□□□□□ -1.93
HLA-DOBP13765 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DOBP13765 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DOBP13765 Z85995.1-201ENST00000415547 335 ntBASIC2.97□□□□□ -1.93
HLA-DOBP13765 AC091390.3-201ENST00000426478 338 ntBASIC2.97□□□□□ -1.93
HLA-DOBP13765 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DOBP13765 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DOBP13765 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DOBP13765 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.97□□□□□ -1.93
HLA-DOBP13765 AC008155.2-201ENST00000464337 397 ntBASIC2.97□□□□□ -1.93
HLA-DOBP13765 AC008628.2-201ENST00000502605 298 ntBASIC2.97□□□□□ -1.93
HLA-DOBP13765 NDUFB4P9-201ENST00000511646 388 ntBASIC2.97□□□□□ -1.93
HLA-DOBP13765 AC046134.1-201ENST00000514454 666 ntBASIC2.97□□□□□ -1.93
HLA-DOBP13765 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DOBP13765 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DOBP13765 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DOBP13765 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC2.97□□□□□ -1.93
HLA-DOBP13765 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DOBP13765 AC004024.1-201ENST00000549244 247 ntBASIC2.97□□□□□ -1.93
HLA-DOBP13765 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DOBP13765 AL162713.1-201ENST00000604480 262 ntBASIC2.97□□□□□ -1.93
HLA-DOBP13765 AC106900.2-201ENST00000604994 317 ntBASIC2.97□□□□□ -1.93
HLA-DOBP13765 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DOBP13765 AC103710.3-201ENST00000608157 948 ntBASIC2.97□□□□□ -1.93
HLA-DOBP13765 AL355365.1-201ENST00000616480 294 ntBASIC2.97□□□□□ -1.93
HLA-DOBP13765 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DOBP13765 AC100810.6-201ENST00000638068 285 ntBASIC2.97□□□□□ -1.93
HLA-DOBP13765 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DOBP13765 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.93
HLA-DOBP13765 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
HLA-DOBP13765 AC007496.3-201ENST00000624987 3443 ntBASIC2.96□□□□□ -1.94
HLA-DOBP13765 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DOBP13765 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
HLA-DOBP13765 UBE2L2-201ENST00000254302 429 ntBASIC2.96□□□□□ -1.94
HLA-DOBP13765 RNU6-1167P-201ENST00000363227 94 ntBASIC2.96□□□□□ -1.94
HLA-DOBP13765 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DOBP13765 RNU6-741P-201ENST00000383889 107 ntBASIC2.96□□□□□ -1.94
HLA-DOBP13765 AL139397.2-201ENST00000404529 772 ntBASIC2.96□□□□□ -1.94
HLA-DOBP13765 AL162578.1-201ENST00000406202 378 ntBASIC2.96□□□□□ -1.94
HLA-DOBP13765 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DOBP13765 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.96□□□□□ -1.94
HLA-DOBP13765 RPL31P12-201ENST00000422587 358 ntBASIC2.96□□□□□ -1.94
HLA-DOBP13765 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.96□□□□□ -1.94
HLA-DOBP13765 HMGB3P11-201ENST00000440127 604 ntBASIC2.96□□□□□ -1.94
HLA-DOBP13765 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DOBP13765 USP9YP8-201ENST00000441913 500 ntBASIC2.96□□□□□ -1.94
HLA-DOBP13765 AL671855.1-201ENST00000446875 1203 ntBASIC2.96□□□□□ -1.94
HLA-DOBP13765 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DOBP13765 HMGN2P7-201ENST00000456186 273 ntBASIC2.96□□□□□ -1.94
HLA-DOBP13765 FTH1P2-201ENST00000466086 412 ntBASIC2.96□□□□□ -1.94
HLA-DOBP13765 RPL31P60-201ENST00000478450 367 ntBASIC2.96□□□□□ -1.94
HLA-DOBP13765 RPS4XP22-201ENST00000480755 780 ntBASIC2.96□□□□□ -1.94
HLA-DOBP13765 RPL21P13-201ENST00000488305 481 ntBASIC2.96□□□□□ -1.94
HLA-DOBP13765 HMGN1P12-201ENST00000499125 195 ntBASIC2.96□□□□□ -1.94
HLA-DOBP13765 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.96□□□□□ -1.94
HLA-DOBP13765 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DOBP13765 APOOP4-201ENST00000513530 597 ntBASIC2.96□□□□□ -1.94
HLA-DOBP13765 AC114781.4-201ENST00000513707 639 ntBASIC2.96□□□□□ -1.94
HLA-DOBP13765 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DOBP13765 RNA5SP291-201ENST00000517222 105 ntBASIC2.96□□□□□ -1.94
HLA-DOBP13765 RN7SKP289-201ENST00000517244 295 ntBASIC2.96□□□□□ -1.94
HLA-DOBP13765 PSMA2P1-201ENST00000526365 646 ntBASIC2.96□□□□□ -1.94
HLA-DOBP13765 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DOBP13765 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.96□□□□□ -1.94
HLA-DOBP13765 AC007687.1-201ENST00000602704 304 ntBASIC2.96□□□□□ -1.94
HLA-DOBP13765 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.96□□□□□ -1.94
HLA-DOBP13765 AC009570.1-201ENST00000609599 745 ntBASIC2.96□□□□□ -1.94
HLA-DOBP13765 AC104260.1-201ENST00000616660 539 ntBASIC2.96□□□□□ -1.94
HLA-DOBP13765 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.96□□□□□ -1.94
HLA-DOBP13765 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DOBP13765 MTND4P12-201ENST00000498999 1377 ntBASIC2.96□□□□□ -1.94
HLA-DOBP13765 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DOBP13765 AL672296.1-201ENST00000427780 2158 ntBASIC2.95□□□□□ -1.94
HLA-DOBP13765 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DOBP13765 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.95□□□□□ -1.94
HLA-DOBP13765 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DOBP13765 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DOBP13765 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.95□□□□□ -1.94
HLA-DOBP13765 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
HLA-DOBP13765 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms