Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 OR56A5-201ENST00000340110 738 ntBASIC1.95□□□□□ -2.1
UBCP0CG48 RNU6-188P-201ENST00000364207 107 ntBASIC1.95□□□□□ -2.1
UBCP0CG48 MIR17-201ENST00000385012 84 ntBASIC1.95□□□□□ -2.1
UBCP0CG48 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
UBCP0CG48 AL445529.1-201ENST00000398713 389 ntBASIC1.95□□□□□ -2.1
UBCP0CG48 NDUFS5P1-201ENST00000405668 289 ntBASIC1.95□□□□□ -2.1
UBCP0CG48 AC107081.1-201ENST00000414975 361 ntBASIC1.95□□□□□ -2.1
UBCP0CG48 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.95□□□□□ -2.1
UBCP0CG48 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.95□□□□□ -2.1
UBCP0CG48 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.95□□□□□ -2.1
UBCP0CG48 BRK1P2-201ENST00000442875 223 ntBASIC1.95□□□□□ -2.1
UBCP0CG48 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.95□□□□□ -2.1
UBCP0CG48 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.95□□□□□ -2.1
UBCP0CG48 AC092001.1-201ENST00000453012 261 ntBASIC1.95□□□□□ -2.1
UBCP0CG48 AC090515.1-201ENST00000465295 476 ntBASIC1.95□□□□□ -2.1
UBCP0CG48 AC055731.1-201ENST00000474387 401 ntBASIC1.95□□□□□ -2.1
UBCP0CG48 AC106872.3-201ENST00000495104 446 ntBASIC1.95□□□□□ -2.1
UBCP0CG48 RN7SL636P-201ENST00000497504 294 ntBASIC1.95□□□□□ -2.1
UBCP0CG48 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.95□□□□□ -2.1
UBCP0CG48 MIR514B-201ENST00000516774 80 ntBASIC1.95□□□□□ -2.1
UBCP0CG48 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.95□□□□□ -2.1
UBCP0CG48 EIF4BP1-201ENST00000554881 351 ntBASIC1.95□□□□□ -2.1
UBCP0CG48 YWHAZP1-201ENST00000556286 722 ntBASIC1.95□□□□□ -2.1
UBCP0CG48 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.95□□□□□ -2.1
UBCP0CG48 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.95□□□□□ -2.1
UBCP0CG48 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.95□□□□□ -2.1
UBCP0CG48 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.95□□□□□ -2.1
UBCP0CG48 AC068790.3-201ENST00000602988 553 ntBASIC1.95□□□□□ -2.1
UBCP0CG48 MTND3P19-201ENST00000603825 345 ntBASIC1.95□□□□□ -2.1
UBCP0CG48 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.95□□□□□ -2.1
UBCP0CG48 AC018645.2-201ENST00000609151 472 ntBASIC1.95□□□□□ -2.1
UBCP0CG48 AC046143.2-201ENST00000609789 160 ntBASIC1.95□□□□□ -2.1
UBCP0CG48 AC009233.1-201ENST00000616477 371 ntBASIC1.95□□□□□ -2.1
UBCP0CG48 AC013470.4-201ENST00000619978 986 ntBASIC1.95□□□□□ -2.1
UBCP0CG48 MIR6132-201ENST00000622083 109 ntBASIC1.95□□□□□ -2.1
UBCP0CG48 AC092125.1-201ENST00000562568 1995 ntBASIC1.95□□□□□ -2.1
UBCP0CG48 AC131280.1-202ENST00000624067 4211 ntBASIC1.95□□□□□ -2.1
UBCP0CG48 Z75746.1-201ENST00000440243 2080 ntBASIC1.95□□□□□ -2.1
UBCP0CG48 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
UBCP0CG48 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
UBCP0CG48 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
UBCP0CG48 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
UBCP0CG48 AL359851.1-201ENST00000569460 4997 ntBASIC1.94□□□□□ -2.1
UBCP0CG48 HSPE1P11-201ENST00000339579 310 ntBASIC1.94□□□□□ -2.1
UBCP0CG48 SNORA80A-201ENST00000363922 136 ntBASIC1.94□□□□□ -2.1
UBCP0CG48 RNA5SP138-201ENST00000365098 114 ntBASIC1.94□□□□□ -2.1
UBCP0CG48 Y_RNA.333-201ENST00000365274 102 ntBASIC1.94□□□□□ -2.1
UBCP0CG48 SNORA70.4-201ENST00000365509 134 ntBASIC1.94□□□□□ -2.1
UBCP0CG48 SNORA67.4-201ENST00000384688 142 ntBASIC1.94□□□□□ -2.1
UBCP0CG48 RNU6-278P-201ENST00000390945 109 ntBASIC1.94□□□□□ -2.1
UBCP0CG48 SNORA48.3-201ENST00000391081 134 ntBASIC1.94□□□□□ -2.1
UBCP0CG48 AC097463.2-201ENST00000421074 142 ntBASIC1.94□□□□□ -2.1
UBCP0CG48 AL445669.1-201ENST00000426743 755 ntBASIC1.94□□□□□ -2.1
UBCP0CG48 AC018634.1-201ENST00000437554 401 ntBASIC1.94□□□□□ -2.1
UBCP0CG48 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.94□□□□□ -2.1
UBCP0CG48 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.94□□□□□ -2.1
UBCP0CG48 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.94□□□□□ -2.1
UBCP0CG48 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.94□□□□□ -2.1
UBCP0CG48 AC117503.1-201ENST00000472241 394 ntBASIC1.94□□□□□ -2.1
UBCP0CG48 AC109486.1-201ENST00000486833 374 ntBASIC1.94□□□□□ -2.1
UBCP0CG48 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
UBCP0CG48 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.94□□□□□ -2.1
UBCP0CG48 SMURF2P1-201ENST00000514992 481 ntBASIC1.94□□□□□ -2.1
UBCP0CG48 RNU4-29P-201ENST00000515943 174 ntBASIC1.94□□□□□ -2.1
UBCP0CG48 RNU6-581P-201ENST00000516214 105 ntBASIC1.94□□□□□ -2.1
UBCP0CG48 RNU2-19P-201ENST00000517288 84 ntBASIC1.94□□□□□ -2.1
UBCP0CG48 DEFB108A-201ENST00000530110 222 ntBASIC1.94□□□□□ -2.1
UBCP0CG48 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.94□□□□□ -2.1
UBCP0CG48 AC023813.2-201ENST00000564321 469 ntBASIC1.94□□□□□ -2.1
UBCP0CG48 AC234778.2-201ENST00000566241 354 ntBASIC1.94□□□□□ -2.1
UBCP0CG48 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.94□□□□□ -2.1
UBCP0CG48 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.94□□□□□ -2.1
UBCP0CG48 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.94□□□□□ -2.1
UBCP0CG48 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.94□□□□□ -2.1
UBCP0CG48 APOOP1-201ENST00000604695 592 ntBASIC1.94□□□□□ -2.1
UBCP0CG48 AC007938.3-201ENST00000604965 623 ntBASIC1.94□□□□□ -2.1
UBCP0CG48 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.94□□□□□ -2.1
UBCP0CG48 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
UBCP0CG48 MIR6134-201ENST00000617606 109 ntBASIC1.94□□□□□ -2.1
UBCP0CG48 MIR5739-201ENST00000619803 80 ntBASIC1.94□□□□□ -2.1
UBCP0CG48 AL162373.1-201ENST00000620433 407 ntBASIC1.94□□□□□ -2.1
UBCP0CG48 AP003485.2-201ENST00000623636 610 ntBASIC1.94□□□□□ -2.1
UBCP0CG48 AL136313.1-201ENST00000624804 202 ntBASIC1.94□□□□□ -2.1
UBCP0CG48 U6.99-201ENST00000637524 83 ntBASIC1.94□□□□□ -2.1
UBCP0CG48 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
UBCP0CG48 RNU5A-8P-201ENST00000364102 114 ntBASIC1.93□□□□□ -2.1
UBCP0CG48 RNA5SP387-201ENST00000364226 106 ntBASIC1.93□□□□□ -2.1
UBCP0CG48 RNU1-91P-201ENST00000364746 163 ntBASIC1.93□□□□□ -2.1
UBCP0CG48 RNA5SP240-201ENST00000365355 128 ntBASIC1.93□□□□□ -2.1
UBCP0CG48 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
UBCP0CG48 SNORA46.1-201ENST00000391069 153 ntBASIC1.93□□□□□ -2.1
UBCP0CG48 CIR1P3-201ENST00000405137 479 ntBASIC1.93□□□□□ -2.1
UBCP0CG48 RNU4-22P-201ENST00000411058 166 ntBASIC1.93□□□□□ -2.1
UBCP0CG48 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.93□□□□□ -2.1
UBCP0CG48 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.93□□□□□ -2.1
UBCP0CG48 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.93□□□□□ -2.1
UBCP0CG48 AL117351.1-201ENST00000438864 766 ntBASIC1.93□□□□□ -2.1
UBCP0CG48 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.93□□□□□ -2.1
UBCP0CG48 RPL7P12-201ENST00000446719 750 ntBASIC1.93□□□□□ -2.1
UBCP0CG48 AC108938.1-201ENST00000451204 136 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 160.8 ms