Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.98□□□□□ -2.09
TPM1P09493 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.98□□□□□ -2.09
TPM1P09493 AC090079.2-201ENST00000575289 768 ntBASIC1.98□□□□□ -2.09
TPM1P09493 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TPM1P09493 AC010928.2-201ENST00000588017 287 ntBASIC1.98□□□□□ -2.09
TPM1P09493 AC243960.4-201ENST00000600532 288 ntBASIC1.98□□□□□ -2.09
TPM1P09493 AL109620.1-201ENST00000618738 1197 ntBASIC1.98□□□□□ -2.09
TPM1P09493 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.98□□□□□ -2.09
TPM1P09493 AL158801.5-201ENST00000623123 465 ntBASIC1.98□□□□□ -2.09
TPM1P09493 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
TPM1P09493 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.98□□□□□ -2.09
TPM1P09493 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.98□□□□□ -2.09
TPM1P09493 AP005901.5-201ENST00000545779 1796 ntBASIC1.98□□□□□ -2.09
TPM1P09493 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.97□□□□□ -2.09
TPM1P09493 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
TPM1P09493 RNU1-72P-201ENST00000362976 153 ntBASIC1.97□□□□□ -2.09
TPM1P09493 RNU6-658P-201ENST00000384606 106 ntBASIC1.97□□□□□ -2.09
TPM1P09493 AC097463.2-201ENST00000421074 142 ntBASIC1.97□□□□□ -2.09
TPM1P09493 MTCO2P1-201ENST00000424648 477 ntBASIC1.97□□□□□ -2.09
TPM1P09493 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.97□□□□□ -2.09
TPM1P09493 AC117503.1-201ENST00000472241 394 ntBASIC1.97□□□□□ -2.09
TPM1P09493 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.97□□□□□ -2.09
TPM1P09493 AP005639.2-201ENST00000527592 928 ntBASIC1.97□□□□□ -2.09
TPM1P09493 SNRPGP1-201ENST00000553864 222 ntBASIC1.97□□□□□ -2.09
TPM1P09493 LINC00933-203ENST00000559812 219 ntBASIC1.97□□□□□ -2.09
TPM1P09493 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.97□□□□□ -2.09
TPM1P09493 DEFB122-202ENST00000569013 197 ntBASIC1.97□□□□□ -2.09
TPM1P09493 BNIP3P23-201ENST00000599655 511 ntBASIC1.97□□□□□ -2.09
TPM1P09493 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.97□□□□□ -2.09
TPM1P09493 AL773524.1-201ENST00000614065 229 ntBASIC1.97□□□□□ -2.09
TPM1P09493 AC099063.3-201ENST00000642066 185 ntBASIC1.97□□□□□ -2.09
TPM1P09493 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
TPM1P09493 AL356432.1-201ENST00000405809 419 ntBASIC1.96□□□□□ -2.1
TPM1P09493 USP9YP26-201ENST00000421008 661 ntBASIC1.96□□□□□ -2.1
TPM1P09493 AL160275.3-201ENST00000423876 471 ntBASIC1.96□□□□□ -2.1
TPM1P09493 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
TPM1P09493 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
TPM1P09493 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.96□□□□□ -2.1
TPM1P09493 RPL23AP6-201ENST00000446637 472 ntBASIC1.96□□□□□ -2.1
TPM1P09493 AC007182.2-201ENST00000489251 402 ntBASIC1.96□□□□□ -2.1
TPM1P09493 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.96□□□□□ -2.1
TPM1P09493 RPS15AP36-201ENST00000492022 382 ntBASIC1.96□□□□□ -2.1
TPM1P09493 RPL38P4-201ENST00000502376 214 ntBASIC1.96□□□□□ -2.1
TPM1P09493 HMGB1P35-201ENST00000503360 598 ntBASIC1.96□□□□□ -2.1
TPM1P09493 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
TPM1P09493 AL161798.1-201ENST00000604630 131 ntBASIC1.96□□□□□ -2.1
TPM1P09493 AL136981.2-201ENST00000617319 734 ntBASIC1.96□□□□□ -2.1
TPM1P09493 AC012150.2-201ENST00000621300 544 ntBASIC1.96□□□□□ -2.1
TPM1P09493 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.96□□□□□ -2.1
TPM1P09493 SNORD48-201ENST00000364953 64 ntBASIC1.95□□□□□ -2.1
TPM1P09493 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.95□□□□□ -2.1
TPM1P09493 MIR95-201ENST00000385072 81 ntBASIC1.95□□□□□ -2.1
TPM1P09493 SNORA11-201ENST00000408789 128 ntBASIC1.95□□□□□ -2.1
TPM1P09493 RNU2-2P-201ENST00000410396 191 ntBASIC1.95□□□□□ -2.1
TPM1P09493 AC068533.2-201ENST00000411872 306 ntBASIC1.95□□□□□ -2.1
TPM1P09493 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.95□□□□□ -2.1
TPM1P09493 AL161788.1-201ENST00000441805 169 ntBASIC1.95□□□□□ -2.1
TPM1P09493 MTCYBP42-201ENST00000444653 1130 ntBASIC1.95□□□□□ -2.1
TPM1P09493 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.95□□□□□ -2.1
TPM1P09493 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
TPM1P09493 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.95□□□□□ -2.1
TPM1P09493 BZW1P2-201ENST00000473537 826 ntBASIC1.95□□□□□ -2.1
TPM1P09493 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.95□□□□□ -2.1
TPM1P09493 RPL7P18-201ENST00000478965 734 ntBASIC1.95□□□□□ -2.1
TPM1P09493 RPL36AP48-201ENST00000485521 314 ntBASIC1.95□□□□□ -2.1
TPM1P09493 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
TPM1P09493 AC106872.3-201ENST00000495104 446 ntBASIC1.95□□□□□ -2.1
TPM1P09493 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.95□□□□□ -2.1
TPM1P09493 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.95□□□□□ -2.1
TPM1P09493 AC020699.1-201ENST00000505161 445 ntBASIC1.95□□□□□ -2.1
TPM1P09493 SNORA4.4-201ENST00000515921 135 ntBASIC1.95□□□□□ -2.1
TPM1P09493 RNU6-390P-201ENST00000516259 103 ntBASIC1.95□□□□□ -2.1
TPM1P09493 HSPE1P18-201ENST00000517602 280 ntBASIC1.95□□□□□ -2.1
TPM1P09493 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.95□□□□□ -2.1
TPM1P09493 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.95□□□□□ -2.1
TPM1P09493 AC106052.1-201ENST00000608029 497 ntBASIC1.95□□□□□ -2.1
TPM1P09493 AC009974.1-201ENST00000608881 455 ntBASIC1.95□□□□□ -2.1
TPM1P09493 U2.15-201ENST00000611544 191 ntBASIC1.95□□□□□ -2.1
TPM1P09493 U2.16-201ENST00000613119 191 ntBASIC1.95□□□□□ -2.1
TPM1P09493 U2.12-201ENST00000613778 191 ntBASIC1.95□□□□□ -2.1
TPM1P09493 U2.20-201ENST00000613956 192 ntBASIC1.95□□□□□ -2.1
TPM1P09493 U2.9-201ENST00000615427 191 ntBASIC1.95□□□□□ -2.1
TPM1P09493 U2.11-201ENST00000616345 191 ntBASIC1.95□□□□□ -2.1
TPM1P09493 U2.2-201ENST00000616535 191 ntBASIC1.95□□□□□ -2.1
TPM1P09493 U2.3-201ENST00000617785 191 ntBASIC1.95□□□□□ -2.1
TPM1P09493 U2.19-201ENST00000618602 191 ntBASIC1.95□□□□□ -2.1
TPM1P09493 RNU2-1-201ENST00000618664 191 ntBASIC1.95□□□□□ -2.1
TPM1P09493 U2.6-201ENST00000619225 191 ntBASIC1.95□□□□□ -2.1
TPM1P09493 U2.5-201ENST00000619465 191 ntBASIC1.95□□□□□ -2.1
TPM1P09493 U2.10-201ENST00000620268 191 ntBASIC1.95□□□□□ -2.1
TPM1P09493 AC116618.1-201ENST00000634617 774 ntBASIC1.95□□□□□ -2.1
TPM1P09493 AC104454.1-201ENST00000421341 1401 ntBASIC1.94□□□□□ -2.1
TPM1P09493 USP9YP6-201ENST00000413550 854 ntBASIC1.94□□□□□ -2.1
TPM1P09493 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.94□□□□□ -2.1
TPM1P09493 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.94□□□□□ -2.1
TPM1P09493 RPL7P34-201ENST00000433316 712 ntBASIC1.94□□□□□ -2.1
TPM1P09493 MTND6P13-201ENST00000443510 523 ntBASIC1.94□□□□□ -2.1
TPM1P09493 FABP5P15-201ENST00000453566 214 ntBASIC1.94□□□□□ -2.1
TPM1P09493 AL441985.1-201ENST00000457727 251 ntBASIC1.94□□□□□ -2.1
TPM1P09493 AC008481.1-201ENST00000463278 396 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms