Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 RNY3P14-201ENST00000384309 102 ntBASIC3.4□□□□□ -1.87
MMP3P08254 SNORA24.1-201ENST00000384401 135 ntBASIC3.4□□□□□ -1.87
MMP3P08254 RNU6-908P-201ENST00000410160 94 ntBASIC3.4□□□□□ -1.87
MMP3P08254 RNU6-1068P-201ENST00000410958 103 ntBASIC3.4□□□□□ -1.87
MMP3P08254 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.4□□□□□ -1.87
MMP3P08254 RPL21P66-201ENST00000426566 466 ntBASIC3.4□□□□□ -1.87
MMP3P08254 AC022018.1-201ENST00000430685 241 ntBASIC3.4□□□□□ -1.87
MMP3P08254 RPL21P112-201ENST00000434403 463 ntBASIC3.4□□□□□ -1.87
MMP3P08254 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.4□□□□□ -1.87
MMP3P08254 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.4□□□□□ -1.87
MMP3P08254 WASF1P1-201ENST00000447560 1131 ntBASIC3.4□□□□□ -1.87
MMP3P08254 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.4□□□□□ -1.87
MMP3P08254 SNORD97-201ENST00000459187 142 ntBASIC3.4□□□□□ -1.87
MMP3P08254 RPL36AP51-201ENST00000487216 318 ntBASIC3.4□□□□□ -1.87
MMP3P08254 AC117522.1-201ENST00000509821 380 ntBASIC3.4□□□□□ -1.87
MMP3P08254 SNORA40.12-201ENST00000516329 111 ntBASIC3.4□□□□□ -1.87
MMP3P08254 RNU6-835P-201ENST00000516974 104 ntBASIC3.4□□□□□ -1.87
MMP3P08254 AC100870.1-201ENST00000522035 505 ntBASIC3.4□□□□□ -1.87
MMP3P08254 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.4□□□□□ -1.87
MMP3P08254 HIF1AP1-201ENST00000553642 175 ntBASIC3.4□□□□□ -1.87
MMP3P08254 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.4□□□□□ -1.87
MMP3P08254 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.4□□□□□ -1.87
MMP3P08254 AC002553.4-201ENST00000616896 331 ntBASIC3.4□□□□□ -1.87
MMP3P08254 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.4□□□□□ -1.87
MMP3P08254 MIR3662-201ENST00000637030 95 ntBASIC3.4□□□□□ -1.87
MMP3P08254 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
MMP3P08254 OR4G2P-202ENST00000641004 1759 ntBASIC3.4□□□□□ -1.87
MMP3P08254 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
MMP3P08254 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
MMP3P08254 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
MMP3P08254 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
MMP3P08254 AC073325.2-201ENST00000339545 159 ntBASIC3.39□□□□□ -1.87
MMP3P08254 RNU4-48P-201ENST00000365559 182 ntBASIC3.39□□□□□ -1.87
MMP3P08254 AP002088.1-201ENST00000382740 395 ntBASIC3.39□□□□□ -1.87
MMP3P08254 RNU6-877P-201ENST00000383868 107 ntBASIC3.39□□□□□ -1.87
MMP3P08254 RPL30P16-201ENST00000419341 429 ntBASIC3.39□□□□□ -1.87
MMP3P08254 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.39□□□□□ -1.87
MMP3P08254 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.39□□□□□ -1.87
MMP3P08254 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.39□□□□□ -1.87
MMP3P08254 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.39□□□□□ -1.87
MMP3P08254 RPS27AP1-201ENST00000475545 471 ntBASIC3.39□□□□□ -1.87
MMP3P08254 AC126389.1-201ENST00000477436 290 ntBASIC3.39□□□□□ -1.87
MMP3P08254 RN7SL432P-201ENST00000484057 298 ntBASIC3.39□□□□□ -1.87
MMP3P08254 RPL31P13-201ENST00000484151 370 ntBASIC3.39□□□□□ -1.87
MMP3P08254 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.39□□□□□ -1.87
MMP3P08254 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.39□□□□□ -1.87
MMP3P08254 AC108078.2-201ENST00000510750 236 ntBASIC3.39□□□□□ -1.87
MMP3P08254 AC091826.1-201ENST00000514065 313 ntBASIC3.39□□□□□ -1.87
MMP3P08254 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.39□□□□□ -1.87
MMP3P08254 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.39□□□□□ -1.87
MMP3P08254 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.39□□□□□ -1.87
MMP3P08254 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.39□□□□□ -1.87
MMP3P08254 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.39□□□□□ -1.87
MMP3P08254 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.39□□□□□ -1.87
MMP3P08254 MIR4425-201ENST00000580572 84 ntBASIC3.39□□□□□ -1.87
MMP3P08254 MIR548S-201ENST00000581352 82 ntBASIC3.39□□□□□ -1.87
MMP3P08254 AL162413.1-201ENST00000603198 110 ntBASIC3.39□□□□□ -1.87
MMP3P08254 AC116312.1-201ENST00000606841 314 ntBASIC3.39□□□□□ -1.87
MMP3P08254 AL020991.1-201ENST00000612314 373 ntBASIC3.39□□□□□ -1.87
MMP3P08254 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
MMP3P08254 AC010338.1-201ENST00000621823 717 ntBASIC3.39□□□□□ -1.87
MMP3P08254 FER-210ENST00000628534 558 ntTSL 5 BASIC3.39□□□□□ -1.87
MMP3P08254 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
MMP3P08254 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
MMP3P08254 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.39□□□□□ -1.87
MMP3P08254 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
MMP3P08254 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
MMP3P08254 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
MMP3P08254 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
MMP3P08254 AL672296.1-201ENST00000427780 2158 ntBASIC3.38□□□□□ -1.87
MMP3P08254 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.38□□□□□ -1.87
MMP3P08254 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.38□□□□□ -1.87
MMP3P08254 AC073343.1-201ENST00000328239 651 ntBASIC3.38□□□□□ -1.87
MMP3P08254 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
MMP3P08254 RNU6-946P-201ENST00000383878 107 ntBASIC3.38□□□□□ -1.87
MMP3P08254 RNU6-301P-201ENST00000384277 107 ntBASIC3.38□□□□□ -1.87
MMP3P08254 Y_RNA.481-201ENST00000384373 102 ntBASIC3.38□□□□□ -1.87
MMP3P08254 Y_RNA.573-201ENST00000384763 105 ntBASIC3.38□□□□□ -1.87
MMP3P08254 MIR454-201ENST00000390180 115 ntBASIC3.38□□□□□ -1.87
MMP3P08254 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
MMP3P08254 Y_RNA.604-201ENST00000410574 102 ntBASIC3.38□□□□□ -1.87
MMP3P08254 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.38□□□□□ -1.87
MMP3P08254 OR51A5P-201ENST00000415429 942 ntBASIC3.38□□□□□ -1.87
MMP3P08254 AC092809.3-201ENST00000415453 231 ntBASIC3.38□□□□□ -1.87
MMP3P08254 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.38□□□□□ -1.87
MMP3P08254 AL109913.1-201ENST00000421173 514 ntBASIC3.38□□□□□ -1.87
MMP3P08254 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.38□□□□□ -1.87
MMP3P08254 USP12PX-201ENST00000432383 1057 ntBASIC3.38□□□□□ -1.87
MMP3P08254 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.38□□□□□ -1.87
MMP3P08254 SEPT14P3-201ENST00000439401 183 ntBASIC3.38□□□□□ -1.87
MMP3P08254 AL135938.1-201ENST00000443141 297 ntBASIC3.38□□□□□ -1.87
MMP3P08254 AL732372.2-207ENST00000445840 183 ntBASIC3.38□□□□□ -1.87
MMP3P08254 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.38□□□□□ -1.87
MMP3P08254 SEPT14P2-201ENST00000453405 183 ntBASIC3.38□□□□□ -1.87
MMP3P08254 KC877373.1-201ENST00000479066 408 ntBASIC3.38□□□□□ -1.87
MMP3P08254 HSPE1P6-201ENST00000479457 291 ntBASIC3.38□□□□□ -1.87
MMP3P08254 AC092436.1-201ENST00000506450 503 ntBASIC3.38□□□□□ -1.87
MMP3P08254 PRDX4P1-201ENST00000507189 574 ntBASIC3.38□□□□□ -1.87
MMP3P08254 SEPT14P4-201ENST00000513445 186 ntBASIC3.38□□□□□ -1.87
MMP3P08254 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms