Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 RPL9P33-201ENST00000484311 566 ntBASIC2.28□□□□□ -2.04
P04436 AC026801.1-201ENST00000497178 464 ntBASIC2.28□□□□□ -2.04
P04436 RPF2P2-201ENST00000504693 896 ntBASIC2.28□□□□□ -2.04
P04436 AC098591.2-201ENST00000510152 315 ntBASIC2.28□□□□□ -2.04
P04436 MRPS33P3-201ENST00000513456 322 ntBASIC2.28□□□□□ -2.04
P04436 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.28□□□□□ -2.04
P04436 RNA5SP24-201ENST00000516478 95 ntBASIC2.28□□□□□ -2.04
P04436 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.28□□□□□ -2.04
P04436 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.28□□□□□ -2.04
P04436 MIR5697-201ENST00000578045 78 ntBASIC2.28□□□□□ -2.04
P04436 MIR3146-201ENST00000580367 79 ntBASIC2.28□□□□□ -2.04
P04436 MIR3118-1-201ENST00000581787 76 ntBASIC2.28□□□□□ -2.04
P04436 AC090616.2-202ENST00000584248 222 ntBASIC2.28□□□□□ -2.04
P04436 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.28□□□□□ -2.04
P04436 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.28□□□□□ -2.04
P04436 AC105129.3-201ENST00000605455 485 ntBASIC2.28□□□□□ -2.04
P04436 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.28□□□□□ -2.04
P04436 AC103710.2-201ENST00000609912 942 ntBASIC2.28□□□□□ -2.04
P04436 AC063944.3-201ENST00000609969 533 ntBASIC2.28□□□□□ -2.04
P04436 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.28□□□□□ -2.04
P04436 AC079248.2-201ENST00000623779 326 ntBASIC2.28□□□□□ -2.04
P04436 AC068057.2-201ENST00000624047 895 ntBASIC2.28□□□□□ -2.04
P04436 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.28□□□□□ -2.04
P04436 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
P04436 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
P04436 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.27□□□□□ -2.05
P04436 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
P04436 RNY4P24-201ENST00000362735 96 ntBASIC2.27□□□□□ -2.05
P04436 RNU6-553P-201ENST00000364047 96 ntBASIC2.27□□□□□ -2.05
P04436 RNU6-501P-201ENST00000364072 100 ntBASIC2.27□□□□□ -2.05
P04436 RNU1-73P-201ENST00000383971 164 ntBASIC2.27□□□□□ -2.05
P04436 MTCYBP36-201ENST00000404146 440 ntBASIC2.27□□□□□ -2.05
P04436 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.27□□□□□ -2.05
P04436 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.27□□□□□ -2.05
P04436 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.27□□□□□ -2.05
P04436 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.27□□□□□ -2.05
P04436 CECR9-201ENST00000453421 199 ntBASIC2.27□□□□□ -2.05
P04436 ART2BP-201ENST00000453501 499 ntBASIC2.27□□□□□ -2.05
P04436 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.27□□□□□ -2.05
P04436 RPL23AP41-201ENST00000484754 458 ntBASIC2.27□□□□□ -2.05
P04436 AIG1P1-201ENST00000503376 148 ntBASIC2.27□□□□□ -2.05
P04436 NDUFB4P2-201ENST00000509515 391 ntBASIC2.27□□□□□ -2.05
P04436 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.27□□□□□ -2.05
P04436 AC022616.6-201ENST00000520479 119 ntBASIC2.27□□□□□ -2.05
P04436 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.27□□□□□ -2.05
P04436 AP006587.4-201ENST00000526053 529 ntBASIC2.27□□□□□ -2.05
P04436 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.27□□□□□ -2.05
P04436 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.27□□□□□ -2.05
P04436 MRPS36P5-201ENST00000551909 298 ntBASIC2.27□□□□□ -2.05
P04436 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.27□□□□□ -2.05
P04436 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.27□□□□□ -2.05
P04436 AP000860.1-201ENST00000605250 559 ntBASIC2.27□□□□□ -2.05
P04436 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.27□□□□□ -2.05
P04436 AC103710.1-201ENST00000610003 901 ntBASIC2.27□□□□□ -2.05
P04436 AL359198.2-201ENST00000611836 194 ntBASIC2.27□□□□□ -2.05
P04436 AL589743.7-201ENST00000612637 233 ntBASIC2.27□□□□□ -2.05
P04436 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.27□□□□□ -2.05
P04436 AC091953.2-201ENST00000623979 160 ntBASIC2.27□□□□□ -2.05
P04436 AC079416.3-201ENST00000624479 549 ntBASIC2.27□□□□□ -2.05
P04436 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.26□□□□□ -2.05
P04436 AC010889.1-201ENST00000566193 2666 ntBASIC2.26□□□□□ -2.05
P04436 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
P04436 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.26□□□□□ -2.05
P04436 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
P04436 RNU6-511P-201ENST00000363496 107 ntBASIC2.26□□□□□ -2.05
P04436 RNA5SP456-201ENST00000364002 114 ntBASIC2.26□□□□□ -2.05
P04436 SNORD115.1-201ENST00000391109 76 ntBASIC2.26□□□□□ -2.05
P04436 AL359511.1-201ENST00000402970 211 ntBASIC2.26□□□□□ -2.05
P04436 RPL26P27-201ENST00000414397 437 ntBASIC2.26□□□□□ -2.05
P04436 SEPT2P1-201ENST00000419651 180 ntBASIC2.26□□□□□ -2.05
P04436 RPL7P34-201ENST00000433316 712 ntBASIC2.26□□□□□ -2.05
P04436 COX6CP12-201ENST00000446748 202 ntBASIC2.26□□□□□ -2.05
P04436 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.26□□□□□ -2.05
P04436 AL133217.1-201ENST00000450980 425 ntBASIC2.26□□□□□ -2.05
P04436 TRBV1-201ENST00000476502 284 ntBASIC2.26□□□□□ -2.05
P04436 RPS3AP22-201ENST00000488297 769 ntBASIC2.26□□□□□ -2.05
P04436 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.26□□□□□ -2.05
P04436 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.26□□□□□ -2.05
P04436 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.26□□□□□ -2.05
P04436 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.26□□□□□ -2.05
P04436 AC109329.2-201ENST00000519658 482 ntBASIC2.26□□□□□ -2.05
P04436 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
P04436 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.26□□□□□ -2.05
P04436 AP003122.4-201ENST00000530980 758 ntBASIC2.26□□□□□ -2.05
P04436 ELOCP31-201ENST00000540463 467 ntBASIC2.26□□□□□ -2.05
P04436 ARL2BPP2-201ENST00000550907 489 ntBASIC2.26□□□□□ -2.05
P04436 AC027176.1-201ENST00000560204 514 ntBASIC2.26□□□□□ -2.05
P04436 PCMTD1P2-201ENST00000565017 355 ntBASIC2.26□□□□□ -2.05
P04436 AC012435.1-202ENST00000568772 240 ntBASIC2.26□□□□□ -2.05
P04436 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.26□□□□□ -2.05
P04436 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.26□□□□□ -2.05
P04436 AL161798.1-201ENST00000604630 131 ntBASIC2.26□□□□□ -2.05
P04436 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
P04436 uc_338.12-201ENST00000616344 181 ntBASIC2.26□□□□□ -2.05
P04436 AC092140.2-201ENST00000618027 521 ntBASIC2.26□□□□□ -2.05
P04436 AC093591.3-201ENST00000634516 308 ntBASIC2.26□□□□□ -2.05
P04436 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
P04436 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
P04436 VTRNA1-1-201ENST00000363120 99 ntBASIC2.25□□□□□ -2.05
P04436 RNU6-1284P-201ENST00000363701 100 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms