Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.85□□□□□ -2.11
HLA-DQA1P01909 MIR3117-201ENST00000584034 78 ntBASIC1.85□□□□□ -2.11
HLA-DQA1P01909 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
HLA-DQA1P01909 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.85□□□□□ -2.11
HLA-DQA1P01909 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.85□□□□□ -2.11
HLA-DQA1P01909 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.85□□□□□ -2.11
HLA-DQA1P01909 AL589994.2-201ENST00000621124 579 ntBASIC1.85□□□□□ -2.11
HLA-DQA1P01909 AC006386.2-201ENST00000624491 75 ntBASIC1.85□□□□□ -2.11
HLA-DQA1P01909 AC012005.1-201ENST00000624575 75 ntBASIC1.85□□□□□ -2.11
HLA-DQA1P01909 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.85□□□□□ -2.11
HLA-DQA1P01909 MTND4P1-201ENST00000457501 1466 ntBASIC1.85□□□□□ -2.11
HLA-DQA1P01909 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.85□□□□□ -2.11
HLA-DQA1P01909 Z82209.1-201ENST00000422141 2135 ntBASIC1.85□□□□□ -2.11
HLA-DQA1P01909 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
HLA-DQA1P01909 AC010889.1-201ENST00000566193 2666 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC1.84□□□□□ -2.11
HLA-DQA1P01909 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.84□□□□□ -2.11
HLA-DQA1P01909 RNA5SP456-201ENST00000364002 114 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 RNU6-188P-201ENST00000364207 107 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 RNU1-51P-201ENST00000365345 176 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 RNU5E-6P-201ENST00000365574 115 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
HLA-DQA1P01909 SNORA18.3-201ENST00000384122 132 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 FCF1P10-201ENST00000407590 479 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 RNU2-62P-201ENST00000410868 191 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 RNA5SP21-201ENST00000410917 96 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 Z92545.1-201ENST00000411782 234 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.84□□□□□ -2.11
HLA-DQA1P01909 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.84□□□□□ -2.11
HLA-DQA1P01909 RPS15AP12-201ENST00000419498 388 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 COTL1P1-201ENST00000422309 375 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 AC019097.1-201ENST00000424783 735 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 AL353729.1-201ENST00000425044 720 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 AC098831.1-201ENST00000440661 216 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 AC025750.2-201ENST00000442609 450 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DQA1P01909 TRBV1-201ENST00000476502 284 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DQA1P01909 RNU6-703P-201ENST00000516946 107 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DQA1P01909 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DQA1P01909 COX6CP5-201ENST00000527162 228 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
HLA-DQA1P01909 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DQA1P01909 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DQA1P01909 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DQA1P01909 RPS3AP4-201ENST00000555161 764 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 AC021739.1-201ENST00000559631 174 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 AC002400.1-201ENST00000569310 726 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 MIR3200-201ENST00000580767 85 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 MIR5694-201ENST00000581190 76 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.84□□□□□ -2.11
HLA-DQA1P01909 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.84□□□□□ -2.11
HLA-DQA1P01909 AC121334.2-201ENST00000605387 271 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 AL121917.1-203ENST00000605534 577 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 AC018638.7-201ENST00000605836 1114 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 AL355816.2-201ENST00000610049 647 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 AC025594.3-201ENST00000613068 790 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 AC131159.1-201ENST00000621854 213 ntBASIC1.84□□□□□ -2.11
HLA-DQA1P01909 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
HLA-DQA1P01909 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
HLA-DQA1P01909 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.84□□□□□ -2.12
HLA-DQA1P01909 NACAP2-201ENST00000318548 624 ntBASIC1.83□□□□□ -2.12
HLA-DQA1P01909 RNU6-658P-201ENST00000384606 106 ntBASIC1.83□□□□□ -2.12
HLA-DQA1P01909 SNORD115.1-201ENST00000391109 76 ntBASIC1.83□□□□□ -2.12
HLA-DQA1P01909 AL138827.1-201ENST00000402666 306 ntBASIC1.83□□□□□ -2.12
HLA-DQA1P01909 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.83□□□□□ -2.12
HLA-DQA1P01909 RPS12P24-201ENST00000412619 387 ntBASIC1.83□□□□□ -2.12
HLA-DQA1P01909 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.83□□□□□ -2.12
HLA-DQA1P01909 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.83□□□□□ -2.12
HLA-DQA1P01909 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.83□□□□□ -2.12
HLA-DQA1P01909 UBE2D3P1-201ENST00000436669 444 ntBASIC1.83□□□□□ -2.12
HLA-DQA1P01909 SSXP1-201ENST00000453640 473 ntBASIC1.83□□□□□ -2.12
HLA-DQA1P01909 RPL37P6-201ENST00000460682 294 ntBASIC1.83□□□□□ -2.12
HLA-DQA1P01909 AL121769.1-201ENST00000469473 401 ntBASIC1.83□□□□□ -2.12
HLA-DQA1P01909 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.83□□□□□ -2.12
HLA-DQA1P01909 MTND1P3-201ENST00000484956 952 ntBASIC1.83□□□□□ -2.12
HLA-DQA1P01909 RPS15AP34-201ENST00000487776 387 ntBASIC1.83□□□□□ -2.12
HLA-DQA1P01909 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.83□□□□□ -2.12
HLA-DQA1P01909 RPL39P36-201ENST00000490784 156 ntBASIC1.83□□□□□ -2.12
HLA-DQA1P01909 AC090255.1-201ENST00000495779 349 ntBASIC1.83□□□□□ -2.12
HLA-DQA1P01909 AC112204.1-201ENST00000502591 103 ntBASIC1.83□□□□□ -2.12
HLA-DQA1P01909 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.83□□□□□ -2.12
HLA-DQA1P01909 SNORA31.6-201ENST00000516241 130 ntBASIC1.83□□□□□ -2.12
HLA-DQA1P01909 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.83□□□□□ -2.12
HLA-DQA1P01909 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.83□□□□□ -2.12
HLA-DQA1P01909 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.83□□□□□ -2.12
HLA-DQA1P01909 AC008015.1-201ENST00000555505 465 ntBASIC1.83□□□□□ -2.12
HLA-DQA1P01909 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.83□□□□□ -2.12
HLA-DQA1P01909 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.83□□□□□ -2.12
HLA-DQA1P01909 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.83□□□□□ -2.12
HLA-DQA1P01909 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC1.83□□□□□ -2.12
HLA-DQA1P01909 AC073544.2-201ENST00000601155 540 ntBASIC1.83□□□□□ -2.12
HLA-DQA1P01909 AC005000.2-201ENST00000605468 310 ntBASIC1.83□□□□□ -2.12
HLA-DQA1P01909 AC034229.4-201ENST00000607861 441 ntBASIC1.83□□□□□ -2.12
HLA-DQA1P01909 AC107294.1-201ENST00000609524 467 ntBASIC1.83□□□□□ -2.12
HLA-DQA1P01909 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.83□□□□□ -2.12
HLA-DQA1P01909 AC004223.4-201ENST00000612426 332 ntBASIC1.83□□□□□ -2.12
HLA-DQA1P01909 AC135507.2-201ENST00000612443 309 ntBASIC1.83□□□□□ -2.12
HLA-DQA1P01909 MIR7844-201ENST00000616161 122 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms