Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.77□□□□□ -1.97
PDGFBP01127 AC103810.1-201ENST00000579873 453 ntBASIC2.77□□□□□ -1.97
PDGFBP01127 MIR4648-201ENST00000580107 72 ntBASIC2.77□□□□□ -1.97
PDGFBP01127 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.77□□□□□ -1.97
PDGFBP01127 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.77□□□□□ -1.97
PDGFBP01127 AC090970.3-201ENST00000612566 866 ntBASIC2.77□□□□□ -1.97
PDGFBP01127 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.77□□□□□ -1.97
PDGFBP01127 AC006338.1-201ENST00000618453 749 ntBASIC2.77□□□□□ -1.97
PDGFBP01127 Z99129.2-201ENST00000619967 314 ntBASIC2.77□□□□□ -1.97
PDGFBP01127 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
PDGFBP01127 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.77□□□□□ -1.97
PDGFBP01127 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
PDGFBP01127 SNORD56.3-201ENST00000363507 71 ntBASIC2.76□□□□□ -1.97
PDGFBP01127 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
PDGFBP01127 AL512633.1-201ENST00000399931 655 ntBASIC2.76□□□□□ -1.97
PDGFBP01127 FCF1P10-201ENST00000407590 479 ntBASIC2.76□□□□□ -1.97
PDGFBP01127 RN7SKP223-201ENST00000410582 62 ntBASIC2.76□□□□□ -1.97
PDGFBP01127 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.76□□□□□ -1.97
PDGFBP01127 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.76□□□□□ -1.97
PDGFBP01127 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.76□□□□□ -1.97
PDGFBP01127 Z99497.1-201ENST00000421282 135 ntBASIC2.76□□□□□ -1.97
PDGFBP01127 CYCSP46-201ENST00000423569 204 ntBASIC2.76□□□□□ -1.97
PDGFBP01127 AC020550.1-201ENST00000447385 163 ntBASIC2.76□□□□□ -1.97
PDGFBP01127 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.76□□□□□ -1.97
PDGFBP01127 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.76□□□□□ -1.97
PDGFBP01127 RPL23AP41-201ENST00000484754 458 ntBASIC2.76□□□□□ -1.97
PDGFBP01127 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.76□□□□□ -1.97
PDGFBP01127 AC092436.1-201ENST00000506450 503 ntBASIC2.76□□□□□ -1.97
PDGFBP01127 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
PDGFBP01127 AC022616.6-201ENST00000520479 119 ntBASIC2.76□□□□□ -1.97
PDGFBP01127 AC104027.1-201ENST00000521887 300 ntBASIC2.76□□□□□ -1.97
PDGFBP01127 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.76□□□□□ -1.97
PDGFBP01127 HMGN2P15-201ENST00000585707 270 ntBASIC2.76□□□□□ -1.97
PDGFBP01127 AC083760.1-201ENST00000589621 670 ntBASIC2.76□□□□□ -1.97
PDGFBP01127 AL590229.1-201ENST00000603497 542 ntBASIC2.76□□□□□ -1.97
PDGFBP01127 DPPA3P3-201ENST00000603842 430 ntBASIC2.76□□□□□ -1.97
PDGFBP01127 AC012360.2-201ENST00000609349 391 ntBASIC2.76□□□□□ -1.97
PDGFBP01127 AC104010.1-201ENST00000616889 150 ntBASIC2.76□□□□□ -1.97
PDGFBP01127 SNHG22-203ENST00000617833 660 ntBASIC2.76□□□□□ -1.97
PDGFBP01127 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.76□□□□□ -1.97
PDGFBP01127 AC025048.6-202ENST00000627667 438 ntBASIC2.76□□□□□ -1.97
PDGFBP01127 CTSLP2-204ENST00000629029 392 ntBASIC2.76□□□□□ -1.97
PDGFBP01127 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.76□□□□□ -1.97
PDGFBP01127 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.75□□□□□ -1.97
PDGFBP01127 MTND5P29-201ENST00000458676 1807 ntBASIC2.75□□□□□ -1.97
PDGFBP01127 U3.11-201ENST00000364476 212 ntBASIC2.75□□□□□ -1.97
PDGFBP01127 Y_RNA.245-201ENST00000364493 95 ntBASIC2.75□□□□□ -1.97
PDGFBP01127 SNORA68.1-201ENST00000364537 132 ntBASIC2.75□□□□□ -1.97
PDGFBP01127 RNY3P13-201ENST00000365542 102 ntBASIC2.75□□□□□ -1.97
PDGFBP01127 RNY3P10-201ENST00000384764 102 ntBASIC2.75□□□□□ -1.97
PDGFBP01127 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.75□□□□□ -1.97
PDGFBP01127 BX682237.1-201ENST00000415016 335 ntBASIC2.75□□□□□ -1.97
PDGFBP01127 HMGB1P9-201ENST00000429856 646 ntBASIC2.75□□□□□ -1.97
PDGFBP01127 AC092427.1-202ENST00000430569 476 ntBASIC2.75□□□□□ -1.97
PDGFBP01127 HMGN2P3-201ENST00000433603 273 ntBASIC2.75□□□□□ -1.97
PDGFBP01127 HMGN2P5-201ENST00000436882 273 ntBASIC2.75□□□□□ -1.97
PDGFBP01127 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.75□□□□□ -1.97
PDGFBP01127 ISCA1P2-201ENST00000438679 421 ntBASIC2.75□□□□□ -1.97
PDGFBP01127 AL513043.1-201ENST00000439124 535 ntBASIC2.75□□□□□ -1.97
PDGFBP01127 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.75□□□□□ -1.97
PDGFBP01127 AC009296.1-201ENST00000443146 155 ntBASIC2.75□□□□□ -1.97
PDGFBP01127 MTND2P4-201ENST00000445034 1004 ntBASIC2.75□□□□□ -1.97
PDGFBP01127 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.75□□□□□ -1.97
PDGFBP01127 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.75□□□□□ -1.97
PDGFBP01127 SSXP1-201ENST00000453640 473 ntBASIC2.75□□□□□ -1.97
PDGFBP01127 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.75□□□□□ -1.97
PDGFBP01127 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.75□□□□□ -1.97
PDGFBP01127 AC109486.1-201ENST00000486833 374 ntBASIC2.75□□□□□ -1.97
PDGFBP01127 AC112204.1-201ENST00000502591 103 ntBASIC2.75□□□□□ -1.97
PDGFBP01127 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PDGFBP01127 MRPS36P2-201ENST00000512569 299 ntBASIC2.75□□□□□ -1.97
PDGFBP01127 AC245166.1-201ENST00000521012 253 ntBASIC2.75□□□□□ -1.97
PDGFBP01127 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.75□□□□□ -1.97
PDGFBP01127 GLYCAM1-201ENST00000546596 285 ntBASIC2.75□□□□□ -1.97
PDGFBP01127 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.75□□□□□ -1.97
PDGFBP01127 AC012414.6-201ENST00000568241 401 ntBASIC2.75□□□□□ -1.97
PDGFBP01127 MIR3616-201ENST00000584070 92 ntBASIC2.75□□□□□ -1.97
PDGFBP01127 AC121334.2-201ENST00000605387 271 ntBASIC2.75□□□□□ -1.97
PDGFBP01127 BX664608.1-201ENST00000610519 487 ntBASIC2.75□□□□□ -1.97
PDGFBP01127 AC008250.2-201ENST00000615261 205 ntBASIC2.75□□□□□ -1.97
PDGFBP01127 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.75□□□□□ -1.97
PDGFBP01127 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.75□□□□□ -1.97
PDGFBP01127 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
PDGFBP01127 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
PDGFBP01127 RNY4P24-201ENST00000362735 96 ntBASIC2.74□□□□□ -1.97
PDGFBP01127 RNU4-21P-201ENST00000362802 126 ntBASIC2.74□□□□□ -1.97
PDGFBP01127 RN7SKP226-201ENST00000364912 300 ntBASIC2.74□□□□□ -1.97
PDGFBP01127 SNORA26.7-201ENST00000391288 122 ntBASIC2.74□□□□□ -1.97
PDGFBP01127 AL513475.1-201ENST00000406602 315 ntBASIC2.74□□□□□ -1.97
PDGFBP01127 RNA5SP425-201ENST00000410336 112 ntBASIC2.74□□□□□ -1.97
PDGFBP01127 NDUFS5P4-201ENST00000412983 318 ntBASIC2.74□□□□□ -1.97
PDGFBP01127 AC096649.2-201ENST00000416186 393 ntBASIC2.74□□□□□ -1.97
PDGFBP01127 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.74□□□□□ -1.97
PDGFBP01127 AC244035.1-201ENST00000430042 390 ntBASIC2.74□□□□□ -1.97
PDGFBP01127 RPS15AP5-201ENST00000436276 388 ntBASIC2.74□□□□□ -1.97
PDGFBP01127 SNRPEP9-201ENST00000436794 238 ntBASIC2.74□□□□□ -1.97
PDGFBP01127 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.74□□□□□ -1.97
PDGFBP01127 RPL12P25-201ENST00000455592 494 ntBASIC2.74□□□□□ -1.97
PDGFBP01127 AC010631.1-201ENST00000474150 156 ntBASIC2.74□□□□□ -1.97
PDGFBP01127 MTND1P3-201ENST00000484956 952 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms