Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.39□□□□□ -1.87
DDX58O95786 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.39□□□□□ -1.87
DDX58O95786 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.39□□□□□ -1.87
DDX58O95786 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.39□□□□□ -1.87
DDX58O95786 RPL7P46-201ENST00000425129 740 ntBASIC3.39□□□□□ -1.87
DDX58O95786 RPL36AP53-201ENST00000432891 316 ntBASIC3.39□□□□□ -1.87
DDX58O95786 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.39□□□□□ -1.87
DDX58O95786 KATNBL1P3-201ENST00000443475 909 ntBASIC3.39□□□□□ -1.87
DDX58O95786 USP9YP29-201ENST00000445112 563 ntBASIC3.39□□□□□ -1.87
DDX58O95786 AL360221.1-201ENST00000445989 335 ntBASIC3.39□□□□□ -1.87
DDX58O95786 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.39□□□□□ -1.87
DDX58O95786 AC010424.1-201ENST00000506336 297 ntBASIC3.39□□□□□ -1.87
DDX58O95786 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.39□□□□□ -1.87
DDX58O95786 AC117522.2-201ENST00000510049 657 ntBASIC3.39□□□□□ -1.87
DDX58O95786 RNA5SP165-201ENST00000517142 115 ntBASIC3.39□□□□□ -1.87
DDX58O95786 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.39□□□□□ -1.87
DDX58O95786 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.39□□□□□ -1.87
DDX58O95786 AL391261.3-201ENST00000557194 520 ntBASIC3.39□□□□□ -1.87
DDX58O95786 AL355877.2-201ENST00000603670 358 ntBASIC3.39□□□□□ -1.87
DDX58O95786 AC087752.4-201ENST00000605911 462 ntBASIC3.39□□□□□ -1.87
DDX58O95786 AC008498.1-201ENST00000613012 531 ntBASIC3.39□□□□□ -1.87
DDX58O95786 ASNSP3-201ENST00000451989 1306 ntBASIC3.39□□□□□ -1.87
DDX58O95786 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
DDX58O95786 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.38□□□□□ -1.87
DDX58O95786 SNORD56.2-201ENST00000363242 71 ntBASIC3.38□□□□□ -1.87
DDX58O95786 SNORA20.2-201ENST00000383922 131 ntBASIC3.38□□□□□ -1.87
DDX58O95786 Y_RNA.553-201ENST00000384670 102 ntBASIC3.38□□□□□ -1.87
DDX58O95786 RPS3AP36-201ENST00000398190 775 ntBASIC3.38□□□□□ -1.87
DDX58O95786 ATG3P1-201ENST00000419507 911 ntBASIC3.38□□□□□ -1.87
DDX58O95786 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.38□□□□□ -1.87
DDX58O95786 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.38□□□□□ -1.87
DDX58O95786 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.38□□□□□ -1.87
DDX58O95786 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.38□□□□□ -1.87
DDX58O95786 SETP8-201ENST00000435341 628 ntBASIC3.38□□□□□ -1.87
DDX58O95786 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.38□□□□□ -1.87
DDX58O95786 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.38□□□□□ -1.87
DDX58O95786 MTCO2P29-201ENST00000465212 189 ntBASIC3.38□□□□□ -1.87
DDX58O95786 MRPS17P3-201ENST00000465453 385 ntBASIC3.38□□□□□ -1.87
DDX58O95786 AC114786.4-201ENST00000508771 728 ntBASIC3.38□□□□□ -1.87
DDX58O95786 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.38□□□□□ -1.87
DDX58O95786 SNORA18.6-201ENST00000516792 115 ntBASIC3.38□□□□□ -1.87
DDX58O95786 RNU6-1092P-201ENST00000516955 87 ntBASIC3.38□□□□□ -1.87
DDX58O95786 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.38□□□□□ -1.87
DDX58O95786 AC006362.1-201ENST00000567392 174 ntBASIC3.38□□□□□ -1.87
DDX58O95786 HMGN2P15-201ENST00000585707 270 ntBASIC3.38□□□□□ -1.87
DDX58O95786 AC005498.1-201ENST00000592125 465 ntBASIC3.38□□□□□ -1.87
DDX58O95786 NRBF2P5-201ENST00000603087 788 ntBASIC3.38□□□□□ -1.87
DDX58O95786 BNIP3P9-201ENST00000603714 553 ntBASIC3.38□□□□□ -1.87
DDX58O95786 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.38□□□□□ -1.87
DDX58O95786 AC091304.9-201ENST00000612091 226 ntBASIC3.38□□□□□ -1.87
DDX58O95786 AP003399.1-201ENST00000637534 361 ntBASIC3.38□□□□□ -1.87
DDX58O95786 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.38□□□□□ -1.87
DDX58O95786 MTND5P27-201ENST00000428871 1720 ntBASIC3.38□□□□□ -1.87
DDX58O95786 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
DDX58O95786 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
DDX58O95786 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
DDX58O95786 AC099654.7-201ENST00000635788 2127 ntBASIC3.37□□□□□ -1.87
DDX58O95786 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
DDX58O95786 AC008669.1-201ENST00000565823 2178 ntBASIC3.37□□□□□ -1.87
DDX58O95786 RNU6-511P-201ENST00000363496 107 ntBASIC3.37□□□□□ -1.87
DDX58O95786 RNU5E-6P-201ENST00000365574 115 ntBASIC3.37□□□□□ -1.87
DDX58O95786 RNU6-297P-201ENST00000384636 107 ntBASIC3.37□□□□□ -1.87
DDX58O95786 AL365338.1-201ENST00000422282 858 ntBASIC3.37□□□□□ -1.87
DDX58O95786 AC093106.2-201ENST00000428212 385 ntBASIC3.37□□□□□ -1.87
DDX58O95786 AC244505.4-201ENST00000434905 287 ntBASIC3.37□□□□□ -1.87
DDX58O95786 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.37□□□□□ -1.87
DDX58O95786 AC073614.1-201ENST00000438690 650 ntBASIC3.37□□□□□ -1.87
DDX58O95786 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.37□□□□□ -1.87
DDX58O95786 SSXP5-201ENST00000443473 287 ntBASIC3.37□□□□□ -1.87
DDX58O95786 GAPDHP17-201ENST00000449858 1001 ntBASIC3.37□□□□□ -1.87
DDX58O95786 AC093899.1-201ENST00000457984 376 ntBASIC3.37□□□□□ -1.87
DDX58O95786 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.37□□□□□ -1.87
DDX58O95786 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.37□□□□□ -1.87
DDX58O95786 RPS27P26-201ENST00000494583 239 ntBASIC3.37□□□□□ -1.87
DDX58O95786 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.37□□□□□ -1.87
DDX58O95786 RNU6-677P-201ENST00000516914 101 ntBASIC3.37□□□□□ -1.87
DDX58O95786 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.37□□□□□ -1.87
DDX58O95786 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
DDX58O95786 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.37□□□□□ -1.87
DDX58O95786 NBR2-204ENST00000587322 63 ntBASIC3.37□□□□□ -1.87
DDX58O95786 RPL23AP78-201ENST00000599928 470 ntBASIC3.37□□□□□ -1.87
DDX58O95786 AC007363.1-201ENST00000604736 620 ntBASIC3.37□□□□□ -1.87
DDX58O95786 AC004908.3-201ENST00000610248 625 ntBASIC3.37□□□□□ -1.87
DDX58O95786 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.37□□□□□ -1.87
DDX58O95786 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.37□□□□□ -1.87
DDX58O95786 AC090582.1-201ENST00000636321 199 ntBASIC3.37□□□□□ -1.87
DDX58O95786 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
DDX58O95786 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.37□□□□□ -1.87
DDX58O95786 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
DDX58O95786 FAM35CP-201ENST00000554755 2470 ntBASIC3.36□□□□□ -1.87
DDX58O95786 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
DDX58O95786 FARSBP1-201ENST00000435808 1778 ntBASIC3.36□□□□□ -1.87
DDX58O95786 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.36□□□□□ -1.87
DDX58O95786 SNORA51.4-201ENST00000364993 124 ntBASIC3.36□□□□□ -1.87
DDX58O95786 RNU6-817P-201ENST00000391083 104 ntBASIC3.36□□□□□ -1.87
DDX58O95786 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
DDX58O95786 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.36□□□□□ -1.87
DDX58O95786 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.36□□□□□ -1.87
DDX58O95786 MTCO2P34-201ENST00000421994 607 ntBASIC3.36□□□□□ -1.87
DDX58O95786 AC104850.1-201ENST00000435940 476 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms