Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 SCARNA17.2-201ENST00000516334 143 ntBASIC2.04□□□□□ -2.08
SEMA3DO95025 RNA5SP290-201ENST00000517133 127 ntBASIC2.04□□□□□ -2.08
SEMA3DO95025 OR5AQ1P-201ENST00000527596 927 ntBASIC2.04□□□□□ -2.08
SEMA3DO95025 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.04□□□□□ -2.08
SEMA3DO95025 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.04□□□□□ -2.08
SEMA3DO95025 AC092125.1-201ENST00000562568 1995 ntBASIC2.04□□□□□ -2.08
SEMA3DO95025 VN1R82P-201ENST00000601481 356 ntBASIC2.04□□□□□ -2.08
SEMA3DO95025 AC025165.5-201ENST00000602802 578 ntBASIC2.04□□□□□ -2.08
SEMA3DO95025 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SEMA3DO95025 AL450336.1-201ENST00000605180 586 ntBASIC2.04□□□□□ -2.08
SEMA3DO95025 AC004805.2-201ENST00000605382 482 ntBASIC2.04□□□□□ -2.08
SEMA3DO95025 RNU6-88P-201ENST00000606801 100 ntBASIC2.04□□□□□ -2.08
SEMA3DO95025 AC007038.2-201ENST00000608095 740 ntBASIC2.04□□□□□ -2.08
SEMA3DO95025 SCARNA17.4-201ENST00000614296 143 ntBASIC2.04□□□□□ -2.08
SEMA3DO95025 AP001486.3-201ENST00000615334 372 ntBASIC2.04□□□□□ -2.08
SEMA3DO95025 AL162373.1-201ENST00000620433 407 ntBASIC2.04□□□□□ -2.08
SEMA3DO95025 AC097655.1-201ENST00000635075 318 ntBASIC2.04□□□□□ -2.08
SEMA3DO95025 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.03□□□□□ -2.08
SEMA3DO95025 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.03□□□□□ -2.08
SEMA3DO95025 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SEMA3DO95025 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
SEMA3DO95025 RNA5SP138-201ENST00000365098 114 ntBASIC2.03□□□□□ -2.08
SEMA3DO95025 MIR888-201ENST00000401186 77 ntBASIC2.03□□□□□ -2.08
SEMA3DO95025 AL139397.2-201ENST00000404529 772 ntBASIC2.03□□□□□ -2.08
SEMA3DO95025 USP9YP13-201ENST00000417797 480 ntBASIC2.03□□□□□ -2.08
SEMA3DO95025 AC106883.1-201ENST00000418805 562 ntBASIC2.03□□□□□ -2.08
SEMA3DO95025 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.03□□□□□ -2.08
SEMA3DO95025 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.03□□□□□ -2.08
SEMA3DO95025 EIF4EP4-201ENST00000424916 578 ntBASIC2.03□□□□□ -2.08
SEMA3DO95025 AC084290.1-201ENST00000434995 374 ntBASIC2.03□□□□□ -2.08
SEMA3DO95025 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.03□□□□□ -2.08
SEMA3DO95025 ELOCP30-201ENST00000447108 299 ntBASIC2.03□□□□□ -2.08
SEMA3DO95025 AC020550.1-201ENST00000447385 163 ntBASIC2.03□□□□□ -2.08
SEMA3DO95025 RPL23AP35-201ENST00000451906 501 ntBASIC2.03□□□□□ -2.08
SEMA3DO95025 CECR9-201ENST00000453421 199 ntBASIC2.03□□□□□ -2.08
SEMA3DO95025 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.03□□□□□ -2.08
SEMA3DO95025 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.03□□□□□ -2.08
SEMA3DO95025 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.03□□□□□ -2.08
SEMA3DO95025 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.03□□□□□ -2.08
SEMA3DO95025 AC110760.3-202ENST00000515177 371 ntBASIC2.03□□□□□ -2.08
SEMA3DO95025 RNA5SP216-201ENST00000516111 123 ntBASIC2.03□□□□□ -2.08
SEMA3DO95025 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.03□□□□□ -2.08
SEMA3DO95025 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.03□□□□□ -2.08
SEMA3DO95025 MTCO2P15-201ENST00000532655 656 ntBASIC2.03□□□□□ -2.08
SEMA3DO95025 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.03□□□□□ -2.08
SEMA3DO95025 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.03□□□□□ -2.08
SEMA3DO95025 MIR544B-201ENST00000582372 78 ntBASIC2.03□□□□□ -2.08
SEMA3DO95025 MIR5002-201ENST00000584713 97 ntBASIC2.03□□□□□ -2.08
SEMA3DO95025 AC239868.4-201ENST00000608318 671 ntBASIC2.03□□□□□ -2.08
SEMA3DO95025 AC072039.2-201ENST00000608883 439 ntBASIC2.03□□□□□ -2.08
SEMA3DO95025 AL136313.1-201ENST00000624804 202 ntBASIC2.03□□□□□ -2.08
SEMA3DO95025 IGHVIII-44-202ENST00000636235 289 ntBASIC2.03□□□□□ -2.08
SEMA3DO95025 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
SEMA3DO95025 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.02□□□□□ -2.09
SEMA3DO95025 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.02□□□□□ -2.09
SEMA3DO95025 HSPE1P11-201ENST00000339579 310 ntBASIC2.02□□□□□ -2.09
SEMA3DO95025 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
SEMA3DO95025 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
SEMA3DO95025 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SEMA3DO95025 RNU6-157P-201ENST00000383957 107 ntBASIC2.02□□□□□ -2.09
SEMA3DO95025 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.02□□□□□ -2.09
SEMA3DO95025 USP9YP26-201ENST00000421008 661 ntBASIC2.02□□□□□ -2.09
SEMA3DO95025 AC244035.1-201ENST00000430042 390 ntBASIC2.02□□□□□ -2.09
SEMA3DO95025 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.02□□□□□ -2.09
SEMA3DO95025 SNRPEP9-201ENST00000436794 238 ntBASIC2.02□□□□□ -2.09
SEMA3DO95025 RPL7P36-201ENST00000444633 681 ntBASIC2.02□□□□□ -2.09
SEMA3DO95025 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.02□□□□□ -2.09
SEMA3DO95025 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.02□□□□□ -2.09
SEMA3DO95025 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.02□□□□□ -2.09
SEMA3DO95025 DUXAP8-207ENST00000456786 622 ntBASIC2.02□□□□□ -2.09
SEMA3DO95025 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.02□□□□□ -2.09
SEMA3DO95025 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
SEMA3DO95025 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.02□□□□□ -2.09
SEMA3DO95025 UBE2DNL-203ENST00000474922 222 ntBASIC2.02□□□□□ -2.09
SEMA3DO95025 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SEMA3DO95025 HSPE1P23-201ENST00000509838 286 ntBASIC2.02□□□□□ -2.09
SEMA3DO95025 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.02□□□□□ -2.09
SEMA3DO95025 AC008413.1-201ENST00000511864 177 ntBASIC2.02□□□□□ -2.09
SEMA3DO95025 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.02□□□□□ -2.09
SEMA3DO95025 RNU6-927P-201ENST00000516199 100 ntBASIC2.02□□□□□ -2.09
SEMA3DO95025 RNU7-193P-201ENST00000516723 65 ntBASIC2.02□□□□□ -2.09
SEMA3DO95025 AC013828.2-201ENST00000532487 235 ntBASIC2.02□□□□□ -2.09
SEMA3DO95025 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SEMA3DO95025 AL359212.1-201ENST00000556608 614 ntBASIC2.02□□□□□ -2.09
SEMA3DO95025 AC136618.2-201ENST00000575091 400 ntBASIC2.02□□□□□ -2.09
SEMA3DO95025 BNIP3P23-201ENST00000599655 511 ntBASIC2.02□□□□□ -2.09
SEMA3DO95025 AL391001.1-201ENST00000602747 715 ntBASIC2.02□□□□□ -2.09
SEMA3DO95025 BCRP9-201ENST00000605312 388 ntBASIC2.02□□□□□ -2.09
SEMA3DO95025 AC007349.4-201ENST00000608114 532 ntBASIC2.02□□□□□ -2.09
SEMA3DO95025 AC004908.2-201ENST00000609090 574 ntBASIC2.02□□□□□ -2.09
SEMA3DO95025 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.02□□□□□ -2.09
SEMA3DO95025 AC098657.3-201ENST00000620434 263 ntBASIC2.02□□□□□ -2.09
SEMA3DO95025 MIR6852-201ENST00000621699 66 ntBASIC2.02□□□□□ -2.09
SEMA3DO95025 MIR6873-201ENST00000622788 63 ntBASIC2.02□□□□□ -2.09
SEMA3DO95025 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.02□□□□□ -2.09
SEMA3DO95025 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.02□□□□□ -2.09
SEMA3DO95025 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.02□□□□□ -2.09
SEMA3DO95025 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SEMA3DO95025 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
SEMA3DO95025 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms