Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 RNU6-1208P-201ENST00000459588 107 ntBASIC3.97□□□□□ -1.77
CDKL5O76039 MTND5P5-201ENST00000503764 376 ntBASIC3.97□□□□□ -1.77
CDKL5O76039 PHBP14-201ENST00000512887 367 ntBASIC3.97□□□□□ -1.77
CDKL5O76039 RNU6-559P-201ENST00000516151 98 ntBASIC3.97□□□□□ -1.77
CDKL5O76039 PTP4A1P6-201ENST00000531034 478 ntBASIC3.97□□□□□ -1.77
CDKL5O76039 AP004242.1-201ENST00000533701 349 ntBASIC3.97□□□□□ -1.77
CDKL5O76039 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.97□□□□□ -1.77
CDKL5O76039 CR383656.7-201ENST00000548164 174 ntBASIC3.97□□□□□ -1.77
CDKL5O76039 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.97□□□□□ -1.77
CDKL5O76039 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.97□□□□□ -1.77
CDKL5O76039 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.97□□□□□ -1.77
CDKL5O76039 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.97□□□□□ -1.77
CDKL5O76039 MIR3171-201ENST00000584270 74 ntBASIC3.97□□□□□ -1.77
CDKL5O76039 AL627309.6-201ENST00000606857 840 ntBASIC3.97□□□□□ -1.77
CDKL5O76039 AC093838.1-201ENST00000613014 469 ntBASIC3.97□□□□□ -1.77
CDKL5O76039 AL161637.1-201ENST00000622380 412 ntBASIC3.97□□□□□ -1.77
CDKL5O76039 AC034229.5-201ENST00000624258 185 ntBASIC3.97□□□□□ -1.77
CDKL5O76039 AL359757.2-201ENST00000624309 274 ntBASIC3.97□□□□□ -1.77
CDKL5O76039 SNORA50A-202ENST00000629536 136 ntBASIC3.97□□□□□ -1.77
CDKL5O76039 AC134503.1-201ENST00000633048 54 ntBASIC3.97□□□□□ -1.77
CDKL5O76039 MTND4LP32-201ENST00000636111 270 ntBASIC3.97□□□□□ -1.77
CDKL5O76039 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDKL5O76039 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDKL5O76039 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.97□□□□□ -1.77
CDKL5O76039 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CDKL5O76039 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.96□□□□□ -1.77
CDKL5O76039 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.96□□□□□ -1.78
CDKL5O76039 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.96□□□□□ -1.78
CDKL5O76039 MIR369-201ENST00000362155 70 ntBASIC3.96□□□□□ -1.78
CDKL5O76039 RNU6-263P-201ENST00000363811 107 ntBASIC3.96□□□□□ -1.78
CDKL5O76039 Y_RNA.216-201ENST00000364205 93 ntBASIC3.96□□□□□ -1.78
CDKL5O76039 SNORD42.2-201ENST00000365570 69 ntBASIC3.96□□□□□ -1.78
CDKL5O76039 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.96□□□□□ -1.78
CDKL5O76039 RNU6-637P-201ENST00000384050 107 ntBASIC3.96□□□□□ -1.78
CDKL5O76039 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CDKL5O76039 SNORD17-201ENST00000390930 237 ntBASIC3.96□□□□□ -1.78
CDKL5O76039 RNU6-821P-201ENST00000390995 107 ntBASIC3.96□□□□□ -1.78
CDKL5O76039 AL109755.1-201ENST00000401791 649 ntBASIC3.96□□□□□ -1.78
CDKL5O76039 MIR548P-201ENST00000408336 84 ntBASIC3.96□□□□□ -1.78
CDKL5O76039 PSMA2P3-201ENST00000429685 675 ntBASIC3.96□□□□□ -1.78
CDKL5O76039 RPS3AP52-201ENST00000435639 297 ntBASIC3.96□□□□□ -1.78
CDKL5O76039 RPL35AP22-201ENST00000436855 335 ntBASIC3.96□□□□□ -1.78
CDKL5O76039 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.96□□□□□ -1.78
CDKL5O76039 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.96□□□□□ -1.78
CDKL5O76039 AC006539.3-201ENST00000454258 129 ntBASIC3.96□□□□□ -1.78
CDKL5O76039 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.96□□□□□ -1.78
CDKL5O76039 VN1R17P-201ENST00000472048 1090 ntBASIC3.96□□□□□ -1.78
CDKL5O76039 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.96□□□□□ -1.78
CDKL5O76039 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.96□□□□□ -1.78
CDKL5O76039 RNU6-1045P-201ENST00000516321 107 ntBASIC3.96□□□□□ -1.78
CDKL5O76039 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.96□□□□□ -1.78
CDKL5O76039 RNU6-1088P-201ENST00000516850 104 ntBASIC3.96□□□□□ -1.78
CDKL5O76039 RNU6-273P-201ENST00000516937 96 ntBASIC3.96□□□□□ -1.78
CDKL5O76039 RNU6-1092P-201ENST00000516955 87 ntBASIC3.96□□□□□ -1.78
CDKL5O76039 SNORA25.17-201ENST00000517184 124 ntBASIC3.96□□□□□ -1.78
CDKL5O76039 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.96□□□□□ -1.78
CDKL5O76039 IGKV2D-19-201ENST00000523346 262 ntBASIC3.96□□□□□ -1.78
CDKL5O76039 MTND4P7-201ENST00000523876 130 ntBASIC3.96□□□□□ -1.78
CDKL5O76039 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.96□□□□□ -1.78
CDKL5O76039 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.96□□□□□ -1.78
CDKL5O76039 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.96□□□□□ -1.78
CDKL5O76039 AC067852.3-201ENST00000589177 561 ntBASIC3.96□□□□□ -1.78
CDKL5O76039 AC067852.4-201ENST00000590314 478 ntBASIC3.96□□□□□ -1.78
CDKL5O76039 APOOP1-201ENST00000604695 592 ntBASIC3.96□□□□□ -1.78
CDKL5O76039 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDKL5O76039 MTND4P27-201ENST00000450813 1354 ntBASIC3.96□□□□□ -1.78
CDKL5O76039 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDKL5O76039 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.96□□□□□ -1.78
CDKL5O76039 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDKL5O76039 MTCO1P9-201ENST00000505577 1534 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 AP001350.1-201ENST00000601906 1524 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDKL5O76039 Y_RNA.339-201ENST00000365325 102 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 RNU6-474P-201ENST00000384243 107 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 RNU6-1297P-201ENST00000384415 104 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 RNU6-754P-201ENST00000391166 107 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.95□□□□□ -1.78
CDKL5O76039 RNA5SP56-201ENST00000410277 118 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 RPS29P4-201ENST00000414733 161 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 UBE2FP1-201ENST00000416536 447 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 ARL5AP1-201ENST00000418991 388 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.95□□□□□ -1.78
CDKL5O76039 RPL36AP6-201ENST00000435770 321 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 GTF2IP13-201ENST00000438487 386 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.95□□□□□ -1.78
CDKL5O76039 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.95□□□□□ -1.78
CDKL5O76039 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.95□□□□□ -1.78
CDKL5O76039 SNORD97-201ENST00000459187 142 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 AP002884.2-201ENST00000471647 395 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 AC025518.1-201ENST00000479856 347 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 AC012181.1-201ENST00000479895 423 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.95□□□□□ -1.78
CDKL5O76039 AC078817.1-201ENST00000492623 435 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 MTCO1P29-201ENST00000496868 288 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 Y_RNA.654-201ENST00000497848 106 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.95□□□□□ -1.78
CDKL5O76039 KLHL2P1-201ENST00000508691 521 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 Y_RNA.682-201ENST00000516457 100 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 Y_RNA.718-201ENST00000517110 102 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms