Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC025574.2-201ENST00000615621 514 ntBASIC5.67□□□□□ -1.5
RNF40O75150 MIR6129-201ENST00000616087 109 ntBASIC5.67□□□□□ -1.5
RNF40O75150 AC005296.1-201ENST00000616145 209 ntBASIC5.67□□□□□ -1.5
RNF40O75150 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF40O75150 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.67□□□□□ -1.5
RNF40O75150 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RNF40O75150 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.67□□□□□ -1.5
RNF40O75150 AC009541.1-201ENST00000438279 2662 ntBASIC5.67□□□□□ -1.5
RNF40O75150 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RNF40O75150 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
RNF40O75150 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
RNF40O75150 AC009229.4-201ENST00000623854 1947 ntBASIC5.66□□□□□ -1.5
RNF40O75150 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RNF40O75150 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RNF40O75150 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
RNF40O75150 RNU6-1249P-201ENST00000363237 111 ntBASIC5.66□□□□□ -1.5
RNF40O75150 RNU5E-7P-201ENST00000365290 117 ntBASIC5.66□□□□□ -1.5
RNF40O75150 U8.10-201ENST00000384260 133 ntBASIC5.66□□□□□ -1.5
RNF40O75150 RNU6-166P-201ENST00000384371 107 ntBASIC5.66□□□□□ -1.5
RNF40O75150 AL645733.1-201ENST00000402250 217 ntBASIC5.66□□□□□ -1.5
RNF40O75150 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.66□□□□□ -1.5
RNF40O75150 RAB9AP3-201ENST00000412737 573 ntBASIC5.66□□□□□ -1.5
RNF40O75150 AC104333.2-201ENST00000422630 192 ntBASIC5.66□□□□□ -1.5
RNF40O75150 RPL7AP25-201ENST00000423357 805 ntBASIC5.66□□□□□ -1.5
RNF40O75150 RAB9AP1-201ENST00000449393 573 ntBASIC5.66□□□□□ -1.5
RNF40O75150 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF40O75150 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.66□□□□□ -1.5
RNF40O75150 AC022968.1-201ENST00000567372 442 ntBASIC5.66□□□□□ -1.5
RNF40O75150 AP005403.1-201ENST00000579720 229 ntBASIC5.66□□□□□ -1.5
RNF40O75150 MIR4311-201ENST00000580794 100 ntBASIC5.66□□□□□ -1.5
RNF40O75150 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.66□□□□□ -1.5
RNF40O75150 TUG1_4.1-201ENST00000619464 181 ntBASIC5.66□□□□□ -1.5
RNF40O75150 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
RNF40O75150 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RNF40O75150 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RNF40O75150 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RNF40O75150 STX3-208ENST00000641815 3236 ntBASIC5.66□□□□□ -1.5
RNF40O75150 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RNF40O75150 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.66□□□□□ -1.5
RNF40O75150 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RNF40O75150 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RNF40O75150 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RNF40O75150 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.65□□□□□ -1.5
RNF40O75150 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
RNF40O75150 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RNF40O75150 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
RNF40O75150 FTLP6-201ENST00000355274 422 ntBASIC5.65□□□□□ -1.5
RNF40O75150 RNU6-78P-201ENST00000362897 107 ntBASIC5.65□□□□□ -1.5
RNF40O75150 U3.2-201ENST00000362981 210 ntBASIC5.65□□□□□ -1.5
RNF40O75150 Y_RNA.172-201ENST00000363765 102 ntBASIC5.65□□□□□ -1.5
RNF40O75150 RNU6-105P-201ENST00000363909 104 ntBASIC5.65□□□□□ -1.5
RNF40O75150 RNU6-476P-201ENST00000384726 107 ntBASIC5.65□□□□□ -1.5
RNF40O75150 MIR550A3-201ENST00000390735 95 ntBASIC5.65□□□□□ -1.5
RNF40O75150 AC008065.1-201ENST00000428525 348 ntBASIC5.65□□□□□ -1.5
RNF40O75150 HSPE1P6-201ENST00000479457 291 ntBASIC5.65□□□□□ -1.5
RNF40O75150 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC5.65□□□□□ -1.5
RNF40O75150 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.65□□□□□ -1.5
RNF40O75150 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC5.65□□□□□ -1.5
RNF40O75150 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.65□□□□□ -1.5
RNF40O75150 AC009127.3-201ENST00000570531 403 ntBASIC5.65□□□□□ -1.5
RNF40O75150 MIR5695-201ENST00000579717 85 ntBASIC5.65□□□□□ -1.5
RNF40O75150 MIR3145-201ENST00000580727 82 ntBASIC5.65□□□□□ -1.5
RNF40O75150 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.65□□□□□ -1.5
RNF40O75150 MIR4496-201ENST00000635896 61 ntBASIC5.65□□□□□ -1.5
RNF40O75150 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
RNF40O75150 PCAT14-202ENST00000627127 3935 ntBASIC5.65□□□□□ -1.51
RNF40O75150 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
RNF40O75150 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RNF40O75150 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RNF40O75150 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RNF40O75150 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RNF40O75150 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.64□□□□□ -1.51
RNF40O75150 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RNF40O75150 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.64□□□□□ -1.51
RNF40O75150 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RNF40O75150 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.64□□□□□ -1.51
RNF40O75150 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF40O75150 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.64□□□□□ -1.51
RNF40O75150 RNU6-249P-201ENST00000363016 102 ntBASIC5.64□□□□□ -1.51
RNF40O75150 RNA5SP339-201ENST00000390987 122 ntBASIC5.64□□□□□ -1.51
RNF40O75150 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF40O75150 Y_RNA.625-201ENST00000411256 107 ntBASIC5.64□□□□□ -1.51
RNF40O75150 AC108075.1-201ENST00000424692 529 ntBASIC5.64□□□□□ -1.51
RNF40O75150 AC091390.3-201ENST00000426478 338 ntBASIC5.64□□□□□ -1.51
RNF40O75150 GSTM5P1-201ENST00000434751 660 ntBASIC5.64□□□□□ -1.51
RNF40O75150 RPL23AP24-201ENST00000458203 385 ntBASIC5.64□□□□□ -1.51
RNF40O75150 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF40O75150 RNU6-589P-201ENST00000516485 107 ntBASIC5.64□□□□□ -1.51
RNF40O75150 SCARNA20.4-201ENST00000516969 131 ntBASIC5.64□□□□□ -1.51
RNF40O75150 AC115990.1-201ENST00000526957 301 ntBASIC5.64□□□□□ -1.51
RNF40O75150 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF40O75150 UBL5P4-201ENST00000562584 236 ntBASIC5.64□□□□□ -1.51
RNF40O75150 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF40O75150 AL390726.5-202ENST00000564800 256 ntBASIC5.64□□□□□ -1.51
RNF40O75150 AL357075.2-201ENST00000614906 189 ntBASIC5.64□□□□□ -1.51
RNF40O75150 AC131238.1-201ENST00000617135 328 ntBASIC5.64□□□□□ -1.51
RNF40O75150 AC048347.1-201ENST00000624621 427 ntBASIC5.64□□□□□ -1.51
RNF40O75150 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RNF40O75150 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF40O75150 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms