Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.57□□□□□ -2
SDC3O75056 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.57□□□□□ -2
SDC3O75056 MIR3118-1-201ENST00000581787 76 ntBASIC2.57□□□□□ -2
SDC3O75056 AL359999.1-201ENST00000604513 294 ntBASIC2.57□□□□□ -2
SDC3O75056 AC105129.3-201ENST00000605455 485 ntBASIC2.57□□□□□ -2
SDC3O75056 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.57□□□□□ -2
SDC3O75056 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.57□□□□□ -2
SDC3O75056 AC034102.8-201ENST00000615146 484 ntBASIC2.57□□□□□ -2
SDC3O75056 AL590808.1-201ENST00000618696 141 ntBASIC2.57□□□□□ -2
SDC3O75056 AC092104.1-201ENST00000497346 1441 ntBASIC2.57□□□□□ -2
SDC3O75056 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SDC3O75056 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
SDC3O75056 RNU5E-5P-201ENST00000365379 116 ntBASIC2.56□□□□□ -2
SDC3O75056 SET-203ENST00000372688 801 ntTSL 2 BASIC2.56□□□□□ -2
SDC3O75056 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.56□□□□□ -2
SDC3O75056 AL356057.2-201ENST00000403318 432 ntBASIC2.56□□□□□ -2
SDC3O75056 MTCYBP36-201ENST00000404146 440 ntBASIC2.56□□□□□ -2
SDC3O75056 RNU2-49P-201ENST00000410666 184 ntBASIC2.56□□□□□ -2
SDC3O75056 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.56□□□□□ -2
SDC3O75056 AC092427.1-202ENST00000430569 476 ntBASIC2.56□□□□□ -2
SDC3O75056 FCF1P1-201ENST00000432690 571 ntBASIC2.56□□□□□ -2
SDC3O75056 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.56□□□□□ -2
SDC3O75056 RPS15AP5-201ENST00000436276 388 ntBASIC2.56□□□□□ -2
SDC3O75056 SNRPEP9-201ENST00000436794 238 ntBASIC2.56□□□□□ -2
SDC3O75056 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.56□□□□□ -2
SDC3O75056 MTND1P30-201ENST00000441241 901 ntBASIC2.56□□□□□ -2
SDC3O75056 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.56□□□□□ -2
SDC3O75056 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.56□□□□□ -2
SDC3O75056 AC098826.2-201ENST00000452011 651 ntBASIC2.56□□□□□ -2
SDC3O75056 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.56□□□□□ -2
SDC3O75056 KATNBL1P6-201ENST00000453433 915 ntBASIC2.56□□□□□ -2
SDC3O75056 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.56□□□□□ -2
SDC3O75056 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.56□□□□□ -2
SDC3O75056 RPL37P6-201ENST00000460682 294 ntBASIC2.56□□□□□ -2
SDC3O75056 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.56□□□□□ -2
SDC3O75056 AC010486.2-201ENST00000505572 483 ntBASIC2.56□□□□□ -2
SDC3O75056 RN7SKP40-201ENST00000517211 242 ntBASIC2.56□□□□□ -2
SDC3O75056 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.56□□□□□ -2
SDC3O75056 AC004486.1-201ENST00000546846 233 ntBASIC2.56□□□□□ -2
SDC3O75056 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.56□□□□□ -2
SDC3O75056 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.56□□□□□ -2
SDC3O75056 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.56□□□□□ -2
SDC3O75056 SNORD53-201ENST00000579969 78 ntBASIC2.56□□□□□ -2
SDC3O75056 DPPA3P3-201ENST00000603842 430 ntBASIC2.56□□□□□ -2
SDC3O75056 AP000787.2-201ENST00000604432 568 ntBASIC2.56□□□□□ -2
SDC3O75056 AC007621.1-201ENST00000604544 437 ntBASIC2.56□□□□□ -2
SDC3O75056 AC012360.2-201ENST00000609349 391 ntBASIC2.56□□□□□ -2
SDC3O75056 BX664608.1-201ENST00000610519 487 ntBASIC2.56□□□□□ -2
SDC3O75056 AC027807.2-201ENST00000616099 408 ntBASIC2.56□□□□□ -2
SDC3O75056 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.56□□□□□ -2
SDC3O75056 AC009878.1-201ENST00000621819 340 ntBASIC2.56□□□□□ -2
SDC3O75056 AC091953.2-201ENST00000623979 160 ntBASIC2.56□□□□□ -2
SDC3O75056 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SDC3O75056 AL137003.2-201ENST00000606924 2538 ntBASIC2.56□□□□□ -2
SDC3O75056 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SDC3O75056 RNA5SP289-201ENST00000362332 137 ntBASIC2.55□□□□□ -2
SDC3O75056 RNU6-511P-201ENST00000363496 107 ntBASIC2.55□□□□□ -2
SDC3O75056 SNORD114-30-201ENST00000364448 72 ntBASIC2.55□□□□□ -2
SDC3O75056 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
SDC3O75056 AL512633.1-201ENST00000399931 655 ntBASIC2.55□□□□□ -2
SDC3O75056 RNU2-25P-201ENST00000411041 191 ntBASIC2.55□□□□□ -2
SDC3O75056 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.55□□□□□ -2
SDC3O75056 AC006366.1-201ENST00000422002 759 ntBASIC2.55□□□□□ -2
SDC3O75056 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.55□□□□□ -2
SDC3O75056 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.55□□□□□ -2
SDC3O75056 ELOCP14-201ENST00000428070 331 ntBASIC2.55□□□□□ -2
SDC3O75056 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.55□□□□□ -2
SDC3O75056 AC010153.1-201ENST00000432862 727 ntBASIC2.55□□□□□ -2
SDC3O75056 MTND4P4-201ENST00000439033 1366 ntBASIC2.55□□□□□ -2
SDC3O75056 RPS15AP7-201ENST00000439294 405 ntBASIC2.55□□□□□ -2
SDC3O75056 ELOCP7-201ENST00000439968 331 ntBASIC2.55□□□□□ -2
SDC3O75056 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.55□□□□□ -2
SDC3O75056 AL513124.1-201ENST00000450410 614 ntBASIC2.55□□□□□ -2
SDC3O75056 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.55□□□□□ -2
SDC3O75056 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.55□□□□□ -2
SDC3O75056 MTND5P29-201ENST00000458676 1807 ntBASIC2.55□□□□□ -2
SDC3O75056 AC126182.1-201ENST00000478134 357 ntBASIC2.55□□□□□ -2
SDC3O75056 AF131216.2-201ENST00000512316 564 ntBASIC2.55□□□□□ -2
SDC3O75056 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.55□□□□□ -2
SDC3O75056 RNA5SP320-201ENST00000516263 124 ntBASIC2.55□□□□□ -2
SDC3O75056 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.55□□□□□ -2
SDC3O75056 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.55□□□□□ -2
SDC3O75056 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.55□□□□□ -2
SDC3O75056 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.55□□□□□ -2
SDC3O75056 ROCK1P1-201ENST00000573767 549 ntBASIC2.55□□□□□ -2
SDC3O75056 MIR3915-201ENST00000578518 97 ntBASIC2.55□□□□□ -2
SDC3O75056 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.55□□□□□ -2
SDC3O75056 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.55□□□□□ -2
SDC3O75056 AP001981.2-201ENST00000603241 418 ntBASIC2.55□□□□□ -2
SDC3O75056 AC004805.2-201ENST00000605382 482 ntBASIC2.55□□□□□ -2
SDC3O75056 AL031775.1-201ENST00000607014 887 ntBASIC2.55□□□□□ -2
SDC3O75056 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.55□□□□□ -2
SDC3O75056 AC103710.2-201ENST00000609912 942 ntBASIC2.55□□□□□ -2
SDC3O75056 AC013562.2-201ENST00000611632 603 ntBASIC2.55□□□□□ -2
SDC3O75056 Z99129.2-201ENST00000619967 314 ntBASIC2.55□□□□□ -2
SDC3O75056 AC064859.1-201ENST00000624741 174 ntBASIC2.55□□□□□ -2
SDC3O75056 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.55□□□□□ -2
SDC3O75056 MIR7515-201ENST00000637837 67 ntBASIC2.55□□□□□ -2
SDC3O75056 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
SDC3O75056 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 181.1 ms