Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 ISCA1P1-201ENST00000426679 387 ntBASIC1.49□□□□□ -2.17
SSNA1O43805 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.49□□□□□ -2.17
SSNA1O43805 GTF2IP3-201ENST00000433887 494 ntBASIC1.49□□□□□ -2.17
SSNA1O43805 USP9YP24-201ENST00000434374 697 ntBASIC1.49□□□□□ -2.17
SSNA1O43805 AL441985.1-201ENST00000457727 251 ntBASIC1.49□□□□□ -2.17
SSNA1O43805 FTH1P2-201ENST00000466086 412 ntBASIC1.49□□□□□ -2.17
SSNA1O43805 AC079203.1-201ENST00000487972 404 ntBASIC1.49□□□□□ -2.17
SSNA1O43805 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.49□□□□□ -2.17
SSNA1O43805 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.49□□□□□ -2.17
SSNA1O43805 AC104090.1-201ENST00000506341 1171 ntBASIC1.49□□□□□ -2.17
SSNA1O43805 AC093809.1-201ENST00000509155 340 ntBASIC1.49□□□□□ -2.17
SSNA1O43805 AC027338.1-201ENST00000514840 825 ntBASIC1.49□□□□□ -2.17
SSNA1O43805 RNY4P37-201ENST00000516225 96 ntBASIC1.49□□□□□ -2.17
SSNA1O43805 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.49□□□□□ -2.17
SSNA1O43805 GNAI2P1-201ENST00000541815 315 ntBASIC1.49□□□□□ -2.17
SSNA1O43805 HSBP1P1-201ENST00000555205 166 ntBASIC1.49□□□□□ -2.17
SSNA1O43805 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.49□□□□□ -2.17
SSNA1O43805 AC104072.1-201ENST00000568817 668 ntBASIC1.49□□□□□ -2.17
SSNA1O43805 SRGNP1-201ENST00000603392 451 ntBASIC1.49□□□□□ -2.17
SSNA1O43805 SEPT7P9-203ENST00000604116 343 ntBASIC1.49□□□□□ -2.17
SSNA1O43805 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.49□□□□□ -2.17
SSNA1O43805 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.49□□□□□ -2.17
SSNA1O43805 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.48□□□□□ -2.17
SSNA1O43805 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
SSNA1O43805 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.48□□□□□ -2.17
SSNA1O43805 MIR1302-8-201ENST00000408342 128 ntBASIC1.48□□□□□ -2.17
SSNA1O43805 VN1R36P-201ENST00000414936 291 ntBASIC1.48□□□□□ -2.17
SSNA1O43805 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.48□□□□□ -2.17
SSNA1O43805 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.48□□□□□ -2.17
SSNA1O43805 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.48□□□□□ -2.17
SSNA1O43805 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.48□□□□□ -2.17
SSNA1O43805 AL109933.2-201ENST00000452651 260 ntBASIC1.48□□□□□ -2.17
SSNA1O43805 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.48□□□□□ -2.17
SSNA1O43805 RPL7P49-201ENST00000471402 708 ntBASIC1.48□□□□□ -2.17
SSNA1O43805 RNU6-1183P-201ENST00000517054 60 ntBASIC1.48□□□□□ -2.17
SSNA1O43805 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.48□□□□□ -2.17
SSNA1O43805 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.48□□□□□ -2.17
SSNA1O43805 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.48□□□□□ -2.17
SSNA1O43805 AP001646.1-201ENST00000527936 915 ntBASIC1.48□□□□□ -2.17
SSNA1O43805 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.48□□□□□ -2.17
SSNA1O43805 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.48□□□□□ -2.17
SSNA1O43805 AC026464.5-201ENST00000562497 722 ntBASIC1.48□□□□□ -2.17
SSNA1O43805 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.48□□□□□ -2.17
SSNA1O43805 AC022254.1-201ENST00000567857 235 ntBASIC1.48□□□□□ -2.17
SSNA1O43805 AC026271.5-201ENST00000577873 130 ntBASIC1.48□□□□□ -2.17
SSNA1O43805 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
SSNA1O43805 MIR4285-201ENST00000581001 85 ntBASIC1.48□□□□□ -2.17
SSNA1O43805 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.48□□□□□ -2.17
SSNA1O43805 AC068790.3-201ENST00000602988 553 ntBASIC1.48□□□□□ -2.17
SSNA1O43805 NDUFA8P1-201ENST00000605525 367 ntBASIC1.48□□□□□ -2.17
SSNA1O43805 AL109618.2-201ENST00000605527 211 ntBASIC1.48□□□□□ -2.17
SSNA1O43805 AC126118.1-201ENST00000607744 628 ntBASIC1.48□□□□□ -2.17
SSNA1O43805 AC092953.2-201ENST00000608000 699 ntBASIC1.48□□□□□ -2.17
SSNA1O43805 AC231657.1-201ENST00000624313 397 ntBASIC1.48□□□□□ -2.17
SSNA1O43805 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.48□□□□□ -2.17
SSNA1O43805 LINC02211-204ENST00000642024 1070 ntBASIC1.48□□□□□ -2.17
SSNA1O43805 AL079343.1-201ENST00000572358 1771 ntBASIC1.48□□□□□ -2.17
SSNA1O43805 AC006020.1-201ENST00000420179 1854 ntBASIC1.48□□□□□ -2.17
SSNA1O43805 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.48□□□□□ -2.17
SSNA1O43805 UBE2L2-201ENST00000254302 429 ntBASIC1.47□□□□□ -2.17
SSNA1O43805 AL589826.1-201ENST00000340697 249 ntBASIC1.47□□□□□ -2.17
SSNA1O43805 RNU6-1032P-201ENST00000384100 107 ntBASIC1.47□□□□□ -2.17
SSNA1O43805 SNORA40.19-201ENST00000390846 128 ntBASIC1.47□□□□□ -2.17
SSNA1O43805 RPL21P24-201ENST00000413752 448 ntBASIC1.47□□□□□ -2.17
SSNA1O43805 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.47□□□□□ -2.17
SSNA1O43805 OR51A5P-201ENST00000415429 942 ntBASIC1.47□□□□□ -2.17
SSNA1O43805 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.47□□□□□ -2.17
SSNA1O43805 AL449283.1-202ENST00000418249 604 ntBASIC1.47□□□□□ -2.17
SSNA1O43805 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.47□□□□□ -2.17
SSNA1O43805 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.47□□□□□ -2.17
SSNA1O43805 MTND4P15-201ENST00000437913 1033 ntBASIC1.47□□□□□ -2.17
SSNA1O43805 RPS15AP9-201ENST00000439856 381 ntBASIC1.47□□□□□ -2.17
SSNA1O43805 MTCYBP42-201ENST00000444653 1130 ntBASIC1.47□□□□□ -2.17
SSNA1O43805 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.47□□□□□ -2.17
SSNA1O43805 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.47□□□□□ -2.17
SSNA1O43805 RNU4-29P-201ENST00000515943 174 ntBASIC1.47□□□□□ -2.17
SSNA1O43805 RNU6-362P-201ENST00000516736 90 ntBASIC1.47□□□□□ -2.17
SSNA1O43805 RNU6-678P-201ENST00000516832 109 ntBASIC1.47□□□□□ -2.17
SSNA1O43805 ACA59.2-201ENST00000517061 156 ntBASIC1.47□□□□□ -2.17
SSNA1O43805 NDUFA5P6-201ENST00000542110 379 ntBASIC1.47□□□□□ -2.17
SSNA1O43805 MIR4713-201ENST00000582691 75 ntBASIC1.47□□□□□ -2.17
SSNA1O43805 UBE2L4-201ENST00000587688 464 ntBASIC1.47□□□□□ -2.17
SSNA1O43805 AC103810.8-201ENST00000607347 118 ntBASIC1.47□□□□□ -2.17
SSNA1O43805 AC023158.2-201ENST00000614876 543 ntBASIC1.47□□□□□ -2.17
SSNA1O43805 AC138627.2-201ENST00000624202 601 ntBASIC1.47□□□□□ -2.17
SSNA1O43805 AC017037.3-201ENST00000625016 472 ntBASIC1.47□□□□□ -2.17
SSNA1O43805 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.47□□□□□ -2.17
SSNA1O43805 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.47□□□□□ -2.17
SSNA1O43805 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SSNA1O43805 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
SSNA1O43805 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
SSNA1O43805 WWP1P1-201ENST00000466609 2769 ntBASIC1.46□□□□□ -2.18
SSNA1O43805 MIR126-201ENST00000362291 85 ntBASIC1.46□□□□□ -2.18
SSNA1O43805 SNORD115-3-201ENST00000363100 82 ntBASIC1.46□□□□□ -2.18
SSNA1O43805 RNU6-744P-201ENST00000365557 107 ntBASIC1.46□□□□□ -2.18
SSNA1O43805 Z98749.2-208ENST00000381646 500 ntBASIC1.46□□□□□ -2.18
SSNA1O43805 RNU6-1316P-201ENST00000384242 108 ntBASIC1.46□□□□□ -2.18
SSNA1O43805 MIR1283-2-201ENST00000408621 87 ntBASIC1.46□□□□□ -2.18
SSNA1O43805 AC127391.1-201ENST00000411737 98 ntBASIC1.46□□□□□ -2.18
SSNA1O43805 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms