Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 USP9YP11-201ENST00000427537 717 ntBASIC2.15□□□□□ -2.07
CHMP2AO43633 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.15□□□□□ -2.07
CHMP2AO43633 ZYG11AP1-201ENST00000430329 837 ntBASIC2.15□□□□□ -2.07
CHMP2AO43633 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.15□□□□□ -2.07
CHMP2AO43633 COX7BP2-201ENST00000437976 242 ntBASIC2.15□□□□□ -2.07
CHMP2AO43633 MTND4P6-201ENST00000438297 472 ntBASIC2.15□□□□□ -2.07
CHMP2AO43633 EEF1A1P39-201ENST00000440791 250 ntBASIC2.15□□□□□ -2.07
CHMP2AO43633 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.15□□□□□ -2.07
CHMP2AO43633 AL009048.1-201ENST00000450437 298 ntBASIC2.15□□□□□ -2.07
CHMP2AO43633 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.15□□□□□ -2.07
CHMP2AO43633 CECR9-201ENST00000453421 199 ntBASIC2.15□□□□□ -2.07
CHMP2AO43633 RPL21P99-201ENST00000480369 423 ntBASIC2.15□□□□□ -2.07
CHMP2AO43633 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.15□□□□□ -2.07
CHMP2AO43633 AC116337.1-201ENST00000509680 687 ntBASIC2.15□□□□□ -2.07
CHMP2AO43633 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.15□□□□□ -2.07
CHMP2AO43633 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.15□□□□□ -2.07
CHMP2AO43633 BNIP3P26-201ENST00000600827 554 ntBASIC2.15□□□□□ -2.07
CHMP2AO43633 AC091057.3-201ENST00000602684 733 ntBASIC2.15□□□□□ -2.07
CHMP2AO43633 AC010678.1-201ENST00000614118 713 ntBASIC2.15□□□□□ -2.07
CHMP2AO43633 AC006386.1-201ENST00000619436 415 ntBASIC2.15□□□□□ -2.07
CHMP2AO43633 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.15□□□□□ -2.07
CHMP2AO43633 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.15□□□□□ -2.07
CHMP2AO43633 OR1S1-201ENST00000624470 978 ntBASIC2.15□□□□□ -2.07
CHMP2AO43633 PISRT1-201ENST00000626175 531 ntBASIC2.15□□□□□ -2.07
CHMP2AO43633 MIR3199-2-201ENST00000636243 86 ntBASIC2.15□□□□□ -2.07
CHMP2AO43633 ZNF29P-201ENST00000225587 168 ntBASIC2.14□□□□□ -2.07
CHMP2AO43633 RNU6-560P-201ENST00000364007 108 ntBASIC2.14□□□□□ -2.07
CHMP2AO43633 RNU6-359P-201ENST00000365466 108 ntBASIC2.14□□□□□ -2.07
CHMP2AO43633 MIR583-201ENST00000384846 75 ntBASIC2.14□□□□□ -2.07
CHMP2AO43633 SNORA40.18-201ENST00000391200 128 ntBASIC2.14□□□□□ -2.07
CHMP2AO43633 CIR1P3-201ENST00000405137 479 ntBASIC2.14□□□□□ -2.07
CHMP2AO43633 MIR1284-201ENST00000408337 120 ntBASIC2.14□□□□□ -2.07
CHMP2AO43633 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.14□□□□□ -2.07
CHMP2AO43633 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.14□□□□□ -2.07
CHMP2AO43633 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.14□□□□□ -2.07
CHMP2AO43633 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.14□□□□□ -2.07
CHMP2AO43633 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.14□□□□□ -2.07
CHMP2AO43633 ARPC3P5-201ENST00000448802 534 ntBASIC2.14□□□□□ -2.07
CHMP2AO43633 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.14□□□□□ -2.07
CHMP2AO43633 USP9YP25-201ENST00000457708 443 ntBASIC2.14□□□□□ -2.07
CHMP2AO43633 MTND1P16-201ENST00000465177 898 ntBASIC2.14□□□□□ -2.07
CHMP2AO43633 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.14□□□□□ -2.07
CHMP2AO43633 AC021382.1-201ENST00000483523 359 ntBASIC2.14□□□□□ -2.07
CHMP2AO43633 RPS27P21-201ENST00000486977 252 ntBASIC2.14□□□□□ -2.07
CHMP2AO43633 AC022493.1-201ENST00000492984 337 ntBASIC2.14□□□□□ -2.07
CHMP2AO43633 AC090255.1-201ENST00000495779 349 ntBASIC2.14□□□□□ -2.07
CHMP2AO43633 RPL23AP63-201ENST00000498752 471 ntBASIC2.14□□□□□ -2.07
CHMP2AO43633 AC116353.3-201ENST00000511215 249 ntBASIC2.14□□□□□ -2.07
CHMP2AO43633 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.14□□□□□ -2.07
CHMP2AO43633 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.14□□□□□ -2.07
CHMP2AO43633 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CHMP2AO43633 AC104984.5-201ENST00000586878 94 ntBASIC2.14□□□□□ -2.07
CHMP2AO43633 UBE2L4-201ENST00000587688 464 ntBASIC2.14□□□□□ -2.07
CHMP2AO43633 AF038458.1-201ENST00000588406 262 ntBASIC2.14□□□□□ -2.07
CHMP2AO43633 AL391813.1-201ENST00000603098 260 ntBASIC2.14□□□□□ -2.07
CHMP2AO43633 AC025811.1-201ENST00000604312 472 ntBASIC2.14□□□□□ -2.07
CHMP2AO43633 TUG1_2.1-201ENST00000614234 87 ntBASIC2.14□□□□□ -2.07
CHMP2AO43633 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.14□□□□□ -2.07
CHMP2AO43633 MIR7843-201ENST00000622274 79 ntBASIC2.14□□□□□ -2.07
CHMP2AO43633 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CHMP2AO43633 AL158801.5-201ENST00000623123 465 ntBASIC2.14□□□□□ -2.07
CHMP2AO43633 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.14□□□□□ -2.07
CHMP2AO43633 MIR7157-201ENST00000635801 60 ntBASIC2.14□□□□□ -2.07
CHMP2AO43633 AC099063.3-201ENST00000642066 185 ntBASIC2.14□□□□□ -2.07
CHMP2AO43633 AC092881.1-201ENST00000638218 2733 ntBASIC2.14□□□□□ -2.07
CHMP2AO43633 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.13□□□□□ -2.07
CHMP2AO43633 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CHMP2AO43633 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.13□□□□□ -2.07
CHMP2AO43633 RNU6-744P-201ENST00000365557 107 ntBASIC2.13□□□□□ -2.07
CHMP2AO43633 RNU6-1316P-201ENST00000384242 108 ntBASIC2.13□□□□□ -2.07
CHMP2AO43633 MIR504-201ENST00000385065 83 ntBASIC2.13□□□□□ -2.07
CHMP2AO43633 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
CHMP2AO43633 UBE2FP1-201ENST00000416536 447 ntBASIC2.13□□□□□ -2.07
CHMP2AO43633 MTCYBP38-201ENST00000417160 1123 ntBASIC2.13□□□□□ -2.07
CHMP2AO43633 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.13□□□□□ -2.07
CHMP2AO43633 AL953862.1-201ENST00000423016 168 ntBASIC2.13□□□□□ -2.07
CHMP2AO43633 MTCO2P23-201ENST00000425216 680 ntBASIC2.13□□□□□ -2.07
CHMP2AO43633 AC093106.2-201ENST00000428212 385 ntBASIC2.13□□□□□ -2.07
CHMP2AO43633 MICF-203ENST00000432679 129 ntBASIC2.13□□□□□ -2.07
CHMP2AO43633 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.13□□□□□ -2.07
CHMP2AO43633 AC098831.1-201ENST00000440661 216 ntBASIC2.13□□□□□ -2.07
CHMP2AO43633 AL358794.1-201ENST00000445689 381 ntBASIC2.13□□□□□ -2.07
CHMP2AO43633 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.13□□□□□ -2.07
CHMP2AO43633 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.13□□□□□ -2.07
CHMP2AO43633 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.13□□□□□ -2.07
CHMP2AO43633 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.13□□□□□ -2.07
CHMP2AO43633 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.13□□□□□ -2.07
CHMP2AO43633 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.13□□□□□ -2.07
CHMP2AO43633 AK6P1-201ENST00000540219 478 ntBASIC2.13□□□□□ -2.07
CHMP2AO43633 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.13□□□□□ -2.07
CHMP2AO43633 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.13□□□□□ -2.07
CHMP2AO43633 AP001269.3-201ENST00000588718 329 ntBASIC2.13□□□□□ -2.07
CHMP2AO43633 AC005014.3-201ENST00000605985 190 ntBASIC2.13□□□□□ -2.07
CHMP2AO43633 AC080013.3-201ENST00000606839 578 ntBASIC2.13□□□□□ -2.07
CHMP2AO43633 RNU4-5P-201ENST00000607255 135 ntBASIC2.13□□□□□ -2.07
CHMP2AO43633 AC239868.4-201ENST00000608318 671 ntBASIC2.13□□□□□ -2.07
CHMP2AO43633 AC069294.1-201ENST00000608397 350 ntBASIC2.13□□□□□ -2.07
CHMP2AO43633 AC009268.2-201ENST00000621925 457 ntBASIC2.13□□□□□ -2.07
CHMP2AO43633 AC241585.2-209ENST00000638217 143 ntBASIC2.13□□□□□ -2.07
CHMP2AO43633 AL079343.1-201ENST00000572358 1771 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms