Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.28□□□□□ -2.2
HMGB3O15347 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.28□□□□□ -2.2
HMGB3O15347 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.28□□□□□ -2.2
HMGB3O15347 AC074050.1-201ENST00000563247 211 ntBASIC1.28□□□□□ -2.2
HMGB3O15347 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.28□□□□□ -2.2
HMGB3O15347 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.28□□□□□ -2.2
HMGB3O15347 MIR3162-201ENST00000581818 82 ntBASIC1.28□□□□□ -2.2
HMGB3O15347 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.28□□□□□ -2.2
HMGB3O15347 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.28□□□□□ -2.2
HMGB3O15347 DUSP12P1-201ENST00000612874 516 ntBASIC1.28□□□□□ -2.2
HMGB3O15347 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.27□□□□□ -2.21
HMGB3O15347 RNU6-28P-201ENST00000362378 107 ntBASIC1.27□□□□□ -2.21
HMGB3O15347 Y_RNA.245-201ENST00000364493 95 ntBASIC1.27□□□□□ -2.21
HMGB3O15347 RN7SKP101-201ENST00000411376 320 ntBASIC1.27□□□□□ -2.21
HMGB3O15347 Z92545.1-201ENST00000411782 234 ntBASIC1.27□□□□□ -2.21
HMGB3O15347 SDAD1P3-201ENST00000427380 333 ntBASIC1.27□□□□□ -2.21
HMGB3O15347 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.27□□□□□ -2.21
HMGB3O15347 TRIM60P13-201ENST00000432350 1283 ntBASIC1.27□□□□□ -2.21
HMGB3O15347 GXYLT1P1-201ENST00000446657 490 ntBASIC1.27□□□□□ -2.21
HMGB3O15347 AC013267.1-201ENST00000458227 267 ntBASIC1.27□□□□□ -2.21
HMGB3O15347 AC069528.1-202ENST00000482888 637 ntBASIC1.27□□□□□ -2.21
HMGB3O15347 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.27□□□□□ -2.21
HMGB3O15347 RNU6-703P-201ENST00000516946 107 ntBASIC1.27□□□□□ -2.21
HMGB3O15347 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC1.27□□□□□ -2.21
HMGB3O15347 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
HMGB3O15347 AL121821.2-201ENST00000556081 394 ntBASIC1.27□□□□□ -2.21
HMGB3O15347 AC026271.5-201ENST00000577873 130 ntBASIC1.27□□□□□ -2.21
HMGB3O15347 MIR4255-201ENST00000579351 72 ntBASIC1.27□□□□□ -2.21
HMGB3O15347 AC092953.2-201ENST00000608000 699 ntBASIC1.27□□□□□ -2.21
HMGB3O15347 AL359314.1-201ENST00000616913 261 ntBASIC1.27□□□□□ -2.21
HMGB3O15347 AL136981.2-201ENST00000617319 734 ntBASIC1.27□□□□□ -2.21
HMGB3O15347 AC253576.2-201ENST00000618815 580 ntBASIC1.27□□□□□ -2.21
HMGB3O15347 AL118508.4-201ENST00000624142 1176 ntBASIC1.27□□□□□ -2.21
HMGB3O15347 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.27□□□□□ -2.21
HMGB3O15347 MIR1322-201ENST00000638013 71 ntBASIC1.27□□□□□ -2.21
HMGB3O15347 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.26□□□□□ -2.21
HMGB3O15347 MTND4P23-201ENST00000447723 1363 ntBASIC1.26□□□□□ -2.21
HMGB3O15347 RNU6-1078P-201ENST00000364522 103 ntBASIC1.26□□□□□ -2.21
HMGB3O15347 RNA5SP88-201ENST00000365560 109 ntBASIC1.26□□□□□ -2.21
HMGB3O15347 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
HMGB3O15347 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
HMGB3O15347 RNU6-754P-201ENST00000391166 107 ntBASIC1.26□□□□□ -2.21
HMGB3O15347 MIR1283-2-201ENST00000408621 87 ntBASIC1.26□□□□□ -2.21
HMGB3O15347 RNA5SP425-201ENST00000410336 112 ntBASIC1.26□□□□□ -2.21
HMGB3O15347 RN7SKP192-201ENST00000411291 327 ntBASIC1.26□□□□□ -2.21
HMGB3O15347 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.26□□□□□ -2.21
HMGB3O15347 AC027644.1-201ENST00000419595 298 ntBASIC1.26□□□□□ -2.21
HMGB3O15347 DPH3P2-201ENST00000422618 250 ntBASIC1.26□□□□□ -2.21
HMGB3O15347 USP9YP24-201ENST00000434374 697 ntBASIC1.26□□□□□ -2.21
HMGB3O15347 USP9YP22-201ENST00000438971 294 ntBASIC1.26□□□□□ -2.21
HMGB3O15347 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.26□□□□□ -2.21
HMGB3O15347 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.26□□□□□ -2.21
HMGB3O15347 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.26□□□□□ -2.21
HMGB3O15347 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.26□□□□□ -2.21
HMGB3O15347 RPL31P50-201ENST00000471002 296 ntBASIC1.26□□□□□ -2.21
HMGB3O15347 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.26□□□□□ -2.21
HMGB3O15347 RPL36AP48-201ENST00000485521 314 ntBASIC1.26□□□□□ -2.21
HMGB3O15347 AC092436.1-201ENST00000506450 503 ntBASIC1.26□□□□□ -2.21
HMGB3O15347 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.26□□□□□ -2.21
HMGB3O15347 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.26□□□□□ -2.21
HMGB3O15347 AC079598.5-201ENST00000547460 117 ntBASIC1.26□□□□□ -2.21
HMGB3O15347 AC008269.2-201ENST00000561915 1105 ntBASIC1.26□□□□□ -2.21
HMGB3O15347 AC016925.2-201ENST00000605108 242 ntBASIC1.26□□□□□ -2.21
HMGB3O15347 AL139344.1-201ENST00000605228 195 ntBASIC1.26□□□□□ -2.21
HMGB3O15347 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.26□□□□□ -2.21
HMGB3O15347 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.26□□□□□ -2.21
HMGB3O15347 MTND5P10-201ENST00000603719 1809 ntBASIC1.26□□□□□ -2.21
HMGB3O15347 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.26□□□□□ -2.21
HMGB3O15347 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
HMGB3O15347 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.26□□□□□ -2.21
HMGB3O15347 AC104454.1-201ENST00000421341 1401 ntBASIC1.25□□□□□ -2.21
HMGB3O15347 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.25□□□□□ -2.21
HMGB3O15347 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
HMGB3O15347 Y_RNA.234-201ENST00000364409 97 ntBASIC1.25□□□□□ -2.21
HMGB3O15347 RNU6-359P-201ENST00000365466 108 ntBASIC1.25□□□□□ -2.21
HMGB3O15347 Z98749.2-208ENST00000381646 500 ntBASIC1.25□□□□□ -2.21
HMGB3O15347 SNORA40.18-201ENST00000391200 128 ntBASIC1.25□□□□□ -2.21
HMGB3O15347 RN7SKP223-201ENST00000410582 62 ntBASIC1.25□□□□□ -2.21
HMGB3O15347 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.25□□□□□ -2.21
HMGB3O15347 MTCO3P46-201ENST00000425787 232 ntBASIC1.25□□□□□ -2.21
HMGB3O15347 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.25□□□□□ -2.21
HMGB3O15347 AC092427.1-201ENST00000439177 601 ntBASIC1.25□□□□□ -2.21
HMGB3O15347 FAM103A2P-201ENST00000444122 354 ntBASIC1.25□□□□□ -2.21
HMGB3O15347 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.25□□□□□ -2.21
HMGB3O15347 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.25□□□□□ -2.21
HMGB3O15347 AL137159.1-201ENST00000452808 512 ntBASIC1.25□□□□□ -2.21
HMGB3O15347 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.25□□□□□ -2.21
HMGB3O15347 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.25□□□□□ -2.21
HMGB3O15347 RPL23AP63-201ENST00000498752 471 ntBASIC1.25□□□□□ -2.21
HMGB3O15347 AC114801.2-201ENST00000503825 781 ntBASIC1.25□□□□□ -2.21
HMGB3O15347 TPT1P8-201ENST00000510120 555 ntBASIC1.25□□□□□ -2.21
HMGB3O15347 RNA5SP165-201ENST00000517142 115 ntBASIC1.25□□□□□ -2.21
HMGB3O15347 DUXAP5-201ENST00000529668 529 ntBASIC1.25□□□□□ -2.21
HMGB3O15347 AC006518.2-201ENST00000542513 940 ntBASIC1.25□□□□□ -2.21
HMGB3O15347 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.25□□□□□ -2.21
HMGB3O15347 AC012213.3-201ENST00000577199 777 ntBASIC1.25□□□□□ -2.21
HMGB3O15347 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.25□□□□□ -2.21
HMGB3O15347 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.25□□□□□ -2.21
HMGB3O15347 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.25□□□□□ -2.21
HMGB3O15347 AL713866.2-201ENST00000603579 219 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 8.6 ms