Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 RNU5A-8P-201ENST00000364102 114 ntBASIC2.55□□□□□ -2
CDX4O14627 SNORD114-30-201ENST00000364448 72 ntBASIC2.55□□□□□ -2
CDX4O14627 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.55□□□□□ -2
CDX4O14627 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CDX4O14627 Y_RNA.516-201ENST00000384541 124 ntBASIC2.55□□□□□ -2
CDX4O14627 SNORA1.3-201ENST00000384676 136 ntBASIC2.55□□□□□ -2
CDX4O14627 SNORA46-201ENST00000384762 135 ntBASIC2.55□□□□□ -2
CDX4O14627 MIR19A-201ENST00000384878 82 ntBASIC2.55□□□□□ -2
CDX4O14627 MIR27B-201ENST00000385129 97 ntBASIC2.55□□□□□ -2
CDX4O14627 RNU6-482P-201ENST00000391068 107 ntBASIC2.55□□□□□ -2
CDX4O14627 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.55□□□□□ -2
CDX4O14627 Y_RNA.598-201ENST00000410480 95 ntBASIC2.55□□□□□ -2
CDX4O14627 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.55□□□□□ -2
CDX4O14627 AL135786.1-201ENST00000415892 214 ntBASIC2.55□□□□□ -2
CDX4O14627 RPLP0P7-201ENST00000416050 667 ntBASIC2.55□□□□□ -2
CDX4O14627 UBE2FP1-201ENST00000416536 447 ntBASIC2.55□□□□□ -2
CDX4O14627 USP9YP13-201ENST00000417797 480 ntBASIC2.55□□□□□ -2
CDX4O14627 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.55□□□□□ -2
CDX4O14627 NDUFB4P7-201ENST00000423198 363 ntBASIC2.55□□□□□ -2
CDX4O14627 AC010975.2-201ENST00000427781 588 ntBASIC2.55□□□□□ -2
CDX4O14627 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.55□□□□□ -2
CDX4O14627 NDUFB4P6-201ENST00000436819 366 ntBASIC2.55□□□□□ -2
CDX4O14627 AC244505.5-201ENST00000443639 207 ntBASIC2.55□□□□□ -2
CDX4O14627 AL033528.1-201ENST00000453780 140 ntBASIC2.55□□□□□ -2
CDX4O14627 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.55□□□□□ -2
CDX4O14627 SNORD42A-201ENST00000459584 64 ntBASIC2.55□□□□□ -2
CDX4O14627 SRRM1P2-201ENST00000464531 1192 ntBASIC2.55□□□□□ -2
CDX4O14627 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.55□□□□□ -2
CDX4O14627 AC055855.1-201ENST00000489563 579 ntBASIC2.55□□□□□ -2
CDX4O14627 RPS15AP36-201ENST00000492022 382 ntBASIC2.55□□□□□ -2
CDX4O14627 AC108210.2-201ENST00000503681 201 ntBASIC2.55□□□□□ -2
CDX4O14627 RPL37P25-201ENST00000507308 276 ntBASIC2.55□□□□□ -2
CDX4O14627 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.55□□□□□ -2
CDX4O14627 NDUFB4P2-201ENST00000509515 391 ntBASIC2.55□□□□□ -2
CDX4O14627 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.55□□□□□ -2
CDX4O14627 SCARNA15.2-201ENST00000516409 127 ntBASIC2.55□□□□□ -2
CDX4O14627 RNU6-201P-201ENST00000517100 61 ntBASIC2.55□□□□□ -2
CDX4O14627 ATP5F1P5-201ENST00000526403 760 ntBASIC2.55□□□□□ -2
CDX4O14627 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.55□□□□□ -2
CDX4O14627 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.55□□□□□ -2
CDX4O14627 AL133153.1-201ENST00000557756 303 ntBASIC2.55□□□□□ -2
CDX4O14627 AC009063.1-201ENST00000563342 702 ntBASIC2.55□□□□□ -2
CDX4O14627 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.55□□□□□ -2
CDX4O14627 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.55□□□□□ -2
CDX4O14627 AF038458.1-201ENST00000588406 262 ntBASIC2.55□□□□□ -2
CDX4O14627 AC107304.1-201ENST00000604229 296 ntBASIC2.55□□□□□ -2
CDX4O14627 AC112191.3-201ENST00000604371 277 ntBASIC2.55□□□□□ -2
CDX4O14627 AC108747.1-201ENST00000609508 535 ntBASIC2.55□□□□□ -2
CDX4O14627 AC009159.1-201ENST00000618386 642 ntBASIC2.55□□□□□ -2
CDX4O14627 U4.3-201ENST00000621047 82 ntBASIC2.55□□□□□ -2
CDX4O14627 AC112204.3-201ENST00000623822 332 ntBASIC2.55□□□□□ -2
CDX4O14627 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
CDX4O14627 AC241585.2-209ENST00000638217 143 ntBASIC2.55□□□□□ -2
CDX4O14627 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.55□□□□□ -2
CDX4O14627 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CDX4O14627 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CDX4O14627 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.54□□□□□ -2
CDX4O14627 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.54□□□□□ -2
CDX4O14627 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
CDX4O14627 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.54□□□□□ -2
CDX4O14627 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.54□□□□□ -2
CDX4O14627 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.54□□□□□ -2
CDX4O14627 Y_RNA.46-201ENST00000362695 102 ntBASIC2.54□□□□□ -2
CDX4O14627 SNORA14A-201ENST00000364773 135 ntBASIC2.54□□□□□ -2
CDX4O14627 RNU6-805P-201ENST00000365643 106 ntBASIC2.54□□□□□ -2
CDX4O14627 CD24P4-201ENST00000382840 243 ntBASIC2.54□□□□□ -2
CDX4O14627 MIR518C-201ENST00000384822 101 ntBASIC2.54□□□□□ -2
CDX4O14627 MIR514A1-201ENST00000385133 98 ntBASIC2.54□□□□□ -2
CDX4O14627 RNU6-1197P-201ENST00000391183 107 ntBASIC2.54□□□□□ -2
CDX4O14627 AC245054.2-201ENST00000415639 319 ntBASIC2.54□□□□□ -2
CDX4O14627 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.54□□□□□ -2
CDX4O14627 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.54□□□□□ -2
CDX4O14627 OR2B8P-201ENST00000432841 938 ntBASIC2.54□□□□□ -2
CDX4O14627 MTCO3P45-201ENST00000443036 613 ntBASIC2.54□□□□□ -2
CDX4O14627 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.54□□□□□ -2
CDX4O14627 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.54□□□□□ -2
CDX4O14627 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.54□□□□□ -2
CDX4O14627 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.54□□□□□ -2
CDX4O14627 RPS20P20-201ENST00000460498 340 ntBASIC2.54□□□□□ -2
CDX4O14627 RPS27P29-201ENST00000463110 252 ntBASIC2.54□□□□□ -2
CDX4O14627 KLF3P2-201ENST00000465138 268 ntBASIC2.54□□□□□ -2
CDX4O14627 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.54□□□□□ -2
CDX4O14627 LARP1BP2-201ENST00000486594 519 ntBASIC2.54□□□□□ -2
CDX4O14627 AL049874.1-201ENST00000489560 388 ntBASIC2.54□□□□□ -2
CDX4O14627 RPL30P5-201ENST00000494923 336 ntBASIC2.54□□□□□ -2
CDX4O14627 AC092436.1-201ENST00000506450 503 ntBASIC2.54□□□□□ -2
CDX4O14627 AF213884.2-201ENST00000510417 903 ntBASIC2.54□□□□□ -2
CDX4O14627 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.54□□□□□ -2
CDX4O14627 RN7SKP24-201ENST00000515888 284 ntBASIC2.54□□□□□ -2
CDX4O14627 MTND1P5-201ENST00000517906 940 ntBASIC2.54□□□□□ -2
CDX4O14627 AC124947.2-202ENST00000552735 133 ntBASIC2.54□□□□□ -2
CDX4O14627 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.54□□□□□ -2
CDX4O14627 ZNF519P3-201ENST00000557158 1032 ntBASIC2.54□□□□□ -2
CDX4O14627 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.54□□□□□ -2
CDX4O14627 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.54□□□□□ -2
CDX4O14627 EIF1P4-201ENST00000572664 335 ntBASIC2.54□□□□□ -2
CDX4O14627 MIR3913-1-201ENST00000577744 102 ntBASIC2.54□□□□□ -2
CDX4O14627 AC009977.1-201ENST00000586015 570 ntBASIC2.54□□□□□ -2
CDX4O14627 BNIP3P8-201ENST00000597863 560 ntBASIC2.54□□□□□ -2
CDX4O14627 AC007938.3-201ENST00000604965 623 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms