Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.96□□□□□ -1.94
O00370 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.96□□□□□ -1.94
O00370 AC128657.1-201ENST00000549459 145 ntBASIC2.96□□□□□ -1.94
O00370 AC079600.2-201ENST00000550076 130 ntBASIC2.96□□□□□ -1.94
O00370 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.96□□□□□ -1.94
O00370 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.96□□□□□ -1.94
O00370 HMGB1P6-201ENST00000569046 646 ntBASIC2.96□□□□□ -1.94
O00370 MIR4528-201ENST00000577763 90 ntBASIC2.96□□□□□ -1.94
O00370 AC073648.5-201ENST00000603502 305 ntBASIC2.96□□□□□ -1.94
O00370 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
O00370 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.96□□□□□ -1.94
O00370 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.96□□□□□ -1.94
O00370 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
O00370 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
O00370 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.95□□□□□ -1.94
O00370 AL365361.1-201ENST00000566942 3481 ntBASIC2.95□□□□□ -1.94
O00370 FARSBP1-201ENST00000435808 1778 ntBASIC2.95□□□□□ -1.94
O00370 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
O00370 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
O00370 SNORD56.2-201ENST00000363242 71 ntBASIC2.95□□□□□ -1.94
O00370 RNU6-270P-201ENST00000364131 105 ntBASIC2.95□□□□□ -1.94
O00370 RNU6-1035P-201ENST00000384477 107 ntBASIC2.95□□□□□ -1.94
O00370 MIR592-201ENST00000384959 97 ntBASIC2.95□□□□□ -1.94
O00370 RNU6-248P-201ENST00000410720 107 ntBASIC2.95□□□□□ -1.94
O00370 CDK8P2-201ENST00000415020 547 ntBASIC2.95□□□□□ -1.94
O00370 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.95□□□□□ -1.94
O00370 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.95□□□□□ -1.94
O00370 PIGFP3-201ENST00000441918 722 ntBASIC2.95□□□□□ -1.94
O00370 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.95□□□□□ -1.94
O00370 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.95□□□□□ -1.94
O00370 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.95□□□□□ -1.94
O00370 AC097462.2-201ENST00000504623 481 ntBASIC2.95□□□□□ -1.94
O00370 CDC42P4-201ENST00000510507 563 ntBASIC2.95□□□□□ -1.94
O00370 RN7SKP298-201ENST00000515950 94 ntBASIC2.95□□□□□ -1.94
O00370 SCARNA15.2-201ENST00000516409 127 ntBASIC2.95□□□□□ -1.94
O00370 AP003392.2-201ENST00000527269 208 ntBASIC2.95□□□□□ -1.94
O00370 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.95□□□□□ -1.94
O00370 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.95□□□□□ -1.94
O00370 AC024909.2-201ENST00000553035 286 ntBASIC2.95□□□□□ -1.94
O00370 AC068135.2-201ENST00000569293 1028 ntBASIC2.95□□□□□ -1.94
O00370 UCA1.1-201ENST00000620952 75 ntBASIC2.95□□□□□ -1.94
O00370 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.95□□□□□ -1.94
O00370 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
O00370 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.95□□□□□ -1.94
O00370 SDAD1P2-201ENST00000441308 2028 ntBASIC2.95□□□□□ -1.94
O00370 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.95□□□□□ -1.94
O00370 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
O00370 AL161431.1-201ENST00000618966 4205 ntBASIC2.94□□□□□ -1.94
O00370 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
O00370 RNU6-188P-201ENST00000364207 107 ntBASIC2.94□□□□□ -1.94
O00370 RNU4-24P-201ENST00000364565 139 ntBASIC2.94□□□□□ -1.94
O00370 RNU6-39P-201ENST00000384344 107 ntBASIC2.94□□□□□ -1.94
O00370 MIR767-201ENST00000390228 109 ntBASIC2.94□□□□□ -1.94
O00370 AL663109.1-201ENST00000411498 844 ntBASIC2.94□□□□□ -1.94
O00370 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.94□□□□□ -1.94
O00370 AL451054.2-201ENST00000420896 202 ntBASIC2.94□□□□□ -1.94
O00370 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
O00370 RAC1P6-201ENST00000423911 575 ntBASIC2.94□□□□□ -1.94
O00370 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.94□□□□□ -1.94
O00370 AC137499.1-201ENST00000427602 88 ntBASIC2.94□□□□□ -1.94
O00370 AL031667.1-201ENST00000440222 725 ntBASIC2.94□□□□□ -1.94
O00370 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.94□□□□□ -1.94
O00370 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.94□□□□□ -1.94
O00370 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.94□□□□□ -1.94
O00370 TPT1P7-201ENST00000458300 517 ntBASIC2.94□□□□□ -1.94
O00370 RPL37P6-201ENST00000460682 294 ntBASIC2.94□□□□□ -1.94
O00370 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.94□□□□□ -1.94
O00370 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.94□□□□□ -1.94
O00370 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.94□□□□□ -1.94
O00370 MTND3P5-201ENST00000512798 333 ntBASIC2.94□□□□□ -1.94
O00370 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.94□□□□□ -1.94
O00370 RNU7-51P-201ENST00000516560 62 ntBASIC2.94□□□□□ -1.94
O00370 AC026241.1-201ENST00000517873 2142 ntBASIC2.94□□□□□ -1.94
O00370 HMGB1P41-201ENST00000520234 440 ntBASIC2.94□□□□□ -1.94
O00370 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
O00370 AMZ2P1-203ENST00000565833 850 ntBASIC2.94□□□□□ -1.94
O00370 ZNF861P-201ENST00000588126 639 ntBASIC2.94□□□□□ -1.94
O00370 AC004223.2-201ENST00000590309 544 ntBASIC2.94□□□□□ -1.94
O00370 AC103710.2-201ENST00000609912 942 ntBASIC2.94□□□□□ -1.94
O00370 AL589743.7-201ENST00000612637 233 ntBASIC2.94□□□□□ -1.94
O00370 AC013476.2-201ENST00000614456 459 ntBASIC2.94□□□□□ -1.94
O00370 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.94□□□□□ -1.94
O00370 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.94□□□□□ -1.94
O00370 AC010680.1-201ENST00000590024 3590 ntBASIC2.93□□□□□ -1.94
O00370 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.93□□□□□ -1.94
O00370 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
O00370 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
O00370 OR5J1P-201ENST00000313544 939 ntBASIC2.93□□□□□ -1.94
O00370 MIR26A1-201ENST00000362205 77 ntBASIC2.93□□□□□ -1.94
O00370 RNU6-1284P-201ENST00000363701 100 ntBASIC2.93□□□□□ -1.94
O00370 RNU4-1-201ENST00000363925 141 ntBASIC2.93□□□□□ -1.94
O00370 RNU6-641P-201ENST00000384006 107 ntBASIC2.93□□□□□ -1.94
O00370 RNU6-1119P-201ENST00000384349 108 ntBASIC2.93□□□□□ -1.94
O00370 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
O00370 AL138827.1-201ENST00000402666 306 ntBASIC2.93□□□□□ -1.94
O00370 RNU6-193P-201ENST00000410977 107 ntBASIC2.93□□□□□ -1.94
O00370 COTL1P1-201ENST00000422309 375 ntBASIC2.93□□□□□ -1.94
O00370 AC009414.1-201ENST00000427200 443 ntBASIC2.93□□□□□ -1.94
O00370 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.93□□□□□ -1.94
O00370 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms