Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.58□□□□□ -2
SLC28A1O00337 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.58□□□□□ -2
SLC28A1O00337 SCARNA17.4-201ENST00000614296 143 ntBASIC2.58□□□□□ -2
SLC28A1O00337 U6.99-201ENST00000637524 83 ntBASIC2.58□□□□□ -2
SLC28A1O00337 MIR7515-201ENST00000637837 67 ntBASIC2.58□□□□□ -2
SLC28A1O00337 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SLC28A1O00337 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
SLC28A1O00337 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SLC28A1O00337 AC073343.1-201ENST00000328239 651 ntBASIC2.57□□□□□ -2
SLC28A1O00337 RNU5E-1-201ENST00000362477 120 ntBASIC2.57□□□□□ -2
SLC28A1O00337 RNU1-100P-201ENST00000365255 165 ntBASIC2.57□□□□□ -2
SLC28A1O00337 MIR301A-201ENST00000385261 86 ntBASIC2.57□□□□□ -2
SLC28A1O00337 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.57□□□□□ -2
SLC28A1O00337 AL139095.1-201ENST00000404326 391 ntBASIC2.57□□□□□ -2
SLC28A1O00337 RNU2-8P-201ENST00000410727 190 ntBASIC2.57□□□□□ -2
SLC28A1O00337 RNA5SP21-201ENST00000410917 96 ntBASIC2.57□□□□□ -2
SLC28A1O00337 RNA5SP492-201ENST00000411330 114 ntBASIC2.57□□□□□ -2
SLC28A1O00337 AC092427.1-202ENST00000430569 476 ntBASIC2.57□□□□□ -2
SLC28A1O00337 AC087499.2-201ENST00000432861 149 ntBASIC2.57□□□□□ -2
SLC28A1O00337 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.57□□□□□ -2
SLC28A1O00337 USP9YP15-201ENST00000442391 422 ntBASIC2.57□□□□□ -2
SLC28A1O00337 TAF9P1-201ENST00000445421 515 ntBASIC2.57□□□□□ -2
SLC28A1O00337 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.57□□□□□ -2
SLC28A1O00337 HMGN2P10-201ENST00000448085 265 ntBASIC2.57□□□□□ -2
SLC28A1O00337 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.57□□□□□ -2
SLC28A1O00337 AP000705.1-201ENST00000454567 350 ntBASIC2.57□□□□□ -2
SLC28A1O00337 TAF9P2-201ENST00000454958 515 ntBASIC2.57□□□□□ -2
SLC28A1O00337 AC107626.1-201ENST00000471084 183 ntBASIC2.57□□□□□ -2
SLC28A1O00337 TRBV1-201ENST00000476502 284 ntBASIC2.57□□□□□ -2
SLC28A1O00337 RPS15AP34-201ENST00000487776 387 ntBASIC2.57□□□□□ -2
SLC28A1O00337 AC007182.2-201ENST00000489251 402 ntBASIC2.57□□□□□ -2
SLC28A1O00337 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.57□□□□□ -2
SLC28A1O00337 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.57□□□□□ -2
SLC28A1O00337 HIGD1AP13-201ENST00000509878 289 ntBASIC2.57□□□□□ -2
SLC28A1O00337 AC022447.1-201ENST00000515358 464 ntBASIC2.57□□□□□ -2
SLC28A1O00337 RN7SKP40-201ENST00000517211 242 ntBASIC2.57□□□□□ -2
SLC28A1O00337 SCARNA11.3-201ENST00000517276 130 ntBASIC2.57□□□□□ -2
SLC28A1O00337 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.57□□□□□ -2
SLC28A1O00337 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.57□□□□□ -2
SLC28A1O00337 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.57□□□□□ -2
SLC28A1O00337 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.57□□□□□ -2
SLC28A1O00337 AC021739.1-201ENST00000559631 174 ntBASIC2.57□□□□□ -2
SLC28A1O00337 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.57□□□□□ -2
SLC28A1O00337 AC090616.3-201ENST00000582184 217 ntBASIC2.57□□□□□ -2
SLC28A1O00337 MIR4325-201ENST00000583049 90 ntBASIC2.57□□□□□ -2
SLC28A1O00337 MIR4635-201ENST00000583759 79 ntBASIC2.57□□□□□ -2
SLC28A1O00337 AC009977.1-201ENST00000586015 570 ntBASIC2.57□□□□□ -2
SLC28A1O00337 BNIP3P8-201ENST00000597863 560 ntBASIC2.57□□□□□ -2
SLC28A1O00337 AC073544.2-201ENST00000601155 540 ntBASIC2.57□□□□□ -2
SLC28A1O00337 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.57□□□□□ -2
SLC28A1O00337 AC130324.3-201ENST00000614165 542 ntBASIC2.57□□□□□ -2
SLC28A1O00337 AC091931.1-201ENST00000623488 728 ntBASIC2.57□□□□□ -2
SLC28A1O00337 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SLC28A1O00337 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
SLC28A1O00337 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
SLC28A1O00337 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.57□□□□□ -2
SLC28A1O00337 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.57□□□□□ -2
SLC28A1O00337 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.57□□□□□ -2
SLC28A1O00337 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.56□□□□□ -2
SLC28A1O00337 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.56□□□□□ -2
SLC28A1O00337 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SLC28A1O00337 GNG5P1-201ENST00000255500 204 ntBASIC2.56□□□□□ -2
SLC28A1O00337 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SLC28A1O00337 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SLC28A1O00337 RNU6-461P-201ENST00000364195 107 ntBASIC2.56□□□□□ -2
SLC28A1O00337 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
SLC28A1O00337 SNORA18.3-201ENST00000384122 132 ntBASIC2.56□□□□□ -2
SLC28A1O00337 MT-TH-201ENST00000387441 69 ntBASIC2.56□□□□□ -2
SLC28A1O00337 RPL23AP32-201ENST00000395315 459 ntBASIC2.56□□□□□ -2
SLC28A1O00337 HMGN2P35-201ENST00000412164 270 ntBASIC2.56□□□□□ -2
SLC28A1O00337 AC092809.3-201ENST00000415453 231 ntBASIC2.56□□□□□ -2
SLC28A1O00337 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.56□□□□□ -2
SLC28A1O00337 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.56□□□□□ -2
SLC28A1O00337 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.56□□□□□ -2
SLC28A1O00337 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.56□□□□□ -2
SLC28A1O00337 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.56□□□□□ -2
SLC28A1O00337 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.56□□□□□ -2
SLC28A1O00337 SRIP1-201ENST00000489235 288 ntBASIC2.56□□□□□ -2
SLC28A1O00337 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.56□□□□□ -2
SLC28A1O00337 RNU5F-8P-201ENST00000515941 111 ntBASIC2.56□□□□□ -2
SLC28A1O00337 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.56□□□□□ -2
SLC28A1O00337 SNORD19.2-201ENST00000516978 73 ntBASIC2.56□□□□□ -2
SLC28A1O00337 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.56□□□□□ -2
SLC28A1O00337 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.56□□□□□ -2
SLC28A1O00337 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.56□□□□□ -2
SLC28A1O00337 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.56□□□□□ -2
SLC28A1O00337 HSPE1P20-201ENST00000538133 289 ntBASIC2.56□□□□□ -2
SLC28A1O00337 AC006199.1-201ENST00000548728 219 ntBASIC2.56□□□□□ -2
SLC28A1O00337 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.56□□□□□ -2
SLC28A1O00337 MIR3670-2-201ENST00000582974 65 ntBASIC2.56□□□□□ -2
SLC28A1O00337 MIR3670-1-201ENST00000584160 65 ntBASIC2.56□□□□□ -2
SLC28A1O00337 MIR3670-3-201ENST00000584855 65 ntBASIC2.56□□□□□ -2
SLC28A1O00337 AL451007.1-201ENST00000595491 289 ntBASIC2.56□□□□□ -2
SLC28A1O00337 AF131215.7-201ENST00000602443 707 ntBASIC2.56□□□□□ -2
SLC28A1O00337 NRBF2P5-201ENST00000603087 788 ntBASIC2.56□□□□□ -2
SLC28A1O00337 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.56□□□□□ -2
SLC28A1O00337 AL451064.1-201ENST00000607718 471 ntBASIC2.56□□□□□ -2
SLC28A1O00337 AC093732.2-201ENST00000607950 274 ntBASIC2.56□□□□□ -2
SLC28A1O00337 AL161734.1-201ENST00000609720 557 ntBASIC2.56□□□□□ -2
SLC28A1O00337 MIR3670-4-201ENST00000612260 65 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms