Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.35□□□□□ -1.87
EIF3FO00303 AC025755.1-201ENST00000521306 278 ntBASIC3.35□□□□□ -1.87
EIF3FO00303 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.35□□□□□ -1.87
EIF3FO00303 AC245505.1-201ENST00000556398 224 ntBASIC3.35□□□□□ -1.87
EIF3FO00303 MIR4782-201ENST00000577987 79 ntBASIC3.35□□□□□ -1.87
EIF3FO00303 MIR548AC-201ENST00000585049 88 ntBASIC3.35□□□□□ -1.87
EIF3FO00303 AC008739.3-201ENST00000603262 127 ntBASIC3.35□□□□□ -1.87
EIF3FO00303 AC008945.2-201ENST00000606056 604 ntBASIC3.35□□□□□ -1.87
EIF3FO00303 AC017083.3-201ENST00000609955 700 ntBASIC3.35□□□□□ -1.87
EIF3FO00303 AC013562.2-201ENST00000611632 603 ntBASIC3.35□□□□□ -1.87
EIF3FO00303 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.35□□□□□ -1.87
EIF3FO00303 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
EIF3FO00303 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
EIF3FO00303 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
EIF3FO00303 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
EIF3FO00303 RNU1-75P-201ENST00000347264 129 ntBASIC3.34□□□□□ -1.87
EIF3FO00303 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.34□□□□□ -1.87
EIF3FO00303 RNU6-1029P-201ENST00000384109 107 ntBASIC3.34□□□□□ -1.87
EIF3FO00303 SNORD17-201ENST00000390930 237 ntBASIC3.34□□□□□ -1.87
EIF3FO00303 SNORA40C-201ENST00000391285 128 ntBASIC3.34□□□□□ -1.87
EIF3FO00303 RNU4-46P-201ENST00000410818 138 ntBASIC3.34□□□□□ -1.87
EIF3FO00303 RNA5SP31-201ENST00000411144 127 ntBASIC3.34□□□□□ -1.87
EIF3FO00303 Z99755.1-201ENST00000414048 380 ntBASIC3.34□□□□□ -1.87
EIF3FO00303 AC096649.2-201ENST00000416186 393 ntBASIC3.34□□□□□ -1.87
EIF3FO00303 AC005300.1-201ENST00000428401 373 ntBASIC3.34□□□□□ -1.87
EIF3FO00303 TIMM9P3-201ENST00000428659 274 ntBASIC3.34□□□□□ -1.87
EIF3FO00303 AC104332.2-201ENST00000429959 156 ntBASIC3.34□□□□□ -1.87
EIF3FO00303 MYL8P-204ENST00000431574 518 ntBASIC3.34□□□□□ -1.87
EIF3FO00303 AC073063.1-201ENST00000434352 607 ntBASIC3.34□□□□□ -1.87
EIF3FO00303 AL078601.1-201ENST00000444542 271 ntBASIC3.34□□□□□ -1.87
EIF3FO00303 RPL23AP20-201ENST00000447965 421 ntBASIC3.34□□□□□ -1.87
EIF3FO00303 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.34□□□□□ -1.87
EIF3FO00303 RPS29P15-201ENST00000458329 171 ntBASIC3.34□□□□□ -1.87
EIF3FO00303 AC010401.1-201ENST00000463867 348 ntBASIC3.34□□□□□ -1.87
EIF3FO00303 AC006512.1-201ENST00000468816 291 ntBASIC3.34□□□□□ -1.87
EIF3FO00303 AC011825.1-201ENST00000484967 388 ntBASIC3.34□□□□□ -1.87
EIF3FO00303 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.34□□□□□ -1.87
EIF3FO00303 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.34□□□□□ -1.87
EIF3FO00303 RNU6-572P-201ENST00000516724 80 ntBASIC3.34□□□□□ -1.87
EIF3FO00303 RNU6-1183P-201ENST00000517054 60 ntBASIC3.34□□□□□ -1.87
EIF3FO00303 SNORA31.19-201ENST00000517079 126 ntBASIC3.34□□□□□ -1.87
EIF3FO00303 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.34□□□□□ -1.87
EIF3FO00303 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
EIF3FO00303 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.34□□□□□ -1.87
EIF3FO00303 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.34□□□□□ -1.87
EIF3FO00303 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.34□□□□□ -1.87
EIF3FO00303 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.34□□□□□ -1.87
EIF3FO00303 RPL23AP78-201ENST00000599928 470 ntBASIC3.34□□□□□ -1.87
EIF3FO00303 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.34□□□□□ -1.87
EIF3FO00303 AL158209.2-201ENST00000619266 216 ntBASIC3.34□□□□□ -1.87
EIF3FO00303 AC090617.7-201ENST00000623952 126 ntBASIC3.34□□□□□ -1.87
EIF3FO00303 AL359740.1-201ENST00000624340 592 ntBASIC3.34□□□□□ -1.87
EIF3FO00303 MIR3199-2-201ENST00000636243 86 ntBASIC3.34□□□□□ -1.87
EIF3FO00303 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
EIF3FO00303 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
EIF3FO00303 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
EIF3FO00303 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
EIF3FO00303 MIR30E-201ENST00000362104 92 ntBASIC3.33□□□□□ -1.88
EIF3FO00303 MIR412-201ENST00000362142 91 ntBASIC3.33□□□□□ -1.88
EIF3FO00303 AP002088.1-201ENST00000382740 395 ntBASIC3.33□□□□□ -1.88
EIF3FO00303 MIR218-2-201ENST00000385006 110 ntBASIC3.33□□□□□ -1.88
EIF3FO00303 SNORA26.7-201ENST00000391288 122 ntBASIC3.33□□□□□ -1.88
EIF3FO00303 UBE2V1P2-201ENST00000397758 440 ntBASIC3.33□□□□□ -1.88
EIF3FO00303 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.33□□□□□ -1.88
EIF3FO00303 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.33□□□□□ -1.88
EIF3FO00303 AC023141.4-201ENST00000412031 328 ntBASIC3.33□□□□□ -1.88
EIF3FO00303 AC093578.1-201ENST00000415219 368 ntBASIC3.33□□□□□ -1.88
EIF3FO00303 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.33□□□□□ -1.88
EIF3FO00303 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.33□□□□□ -1.88
EIF3FO00303 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.33□□□□□ -1.88
EIF3FO00303 HMGN2P10-201ENST00000448085 265 ntBASIC3.33□□□□□ -1.88
EIF3FO00303 RPL9P6-201ENST00000492764 598 ntBASIC3.33□□□□□ -1.88
EIF3FO00303 OR5B10P-201ENST00000532869 642 ntBASIC3.33□□□□□ -1.88
EIF3FO00303 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
EIF3FO00303 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.33□□□□□ -1.88
EIF3FO00303 MIR4703-201ENST00000577728 79 ntBASIC3.33□□□□□ -1.88
EIF3FO00303 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.33□□□□□ -1.88
EIF3FO00303 AL356321.1-201ENST00000621360 228 ntBASIC3.33□□□□□ -1.88
EIF3FO00303 AC124864.2-201ENST00000624736 186 ntBASIC3.33□□□□□ -1.88
EIF3FO00303 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.33□□□□□ -1.88
EIF3FO00303 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.33□□□□□ -1.88
EIF3FO00303 MIR6863-201ENST00000636112 90 ntBASIC3.33□□□□□ -1.88
EIF3FO00303 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.33□□□□□ -1.88
EIF3FO00303 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.33□□□□□ -1.88
EIF3FO00303 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
EIF3FO00303 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
EIF3FO00303 ZNF519P1-201ENST00000449011 1626 ntBASIC3.33□□□□□ -1.88
EIF3FO00303 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.33□□□□□ -1.88
EIF3FO00303 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.33□□□□□ -1.88
EIF3FO00303 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
EIF3FO00303 CKAP2P1-201ENST00000555477 2049 ntBASIC3.32□□□□□ -1.88
EIF3FO00303 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
EIF3FO00303 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
EIF3FO00303 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.32□□□□□ -1.88
EIF3FO00303 RNA5SP119-201ENST00000362715 117 ntBASIC3.32□□□□□ -1.88
EIF3FO00303 U8.9-201ENST00000365667 134 ntBASIC3.32□□□□□ -1.88
EIF3FO00303 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
EIF3FO00303 Y_RNA.481-201ENST00000384373 102 ntBASIC3.32□□□□□ -1.88
EIF3FO00303 RNU6-550P-201ENST00000391057 101 ntBASIC3.32□□□□□ -1.88
EIF3FO00303 RNA5SP171-201ENST00000391071 115 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms