Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 RN7SKP57-201ENST00000517248 293 ntBASIC1.85□□□□□ -2.11
SMKR1H3BMG3 AC107934.1-201ENST00000522215 217 ntBASIC1.85□□□□□ -2.11
SMKR1H3BMG3 AC079598.5-201ENST00000547460 117 ntBASIC1.85□□□□□ -2.11
SMKR1H3BMG3 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.85□□□□□ -2.11
SMKR1H3BMG3 AP001981.2-201ENST00000603241 418 ntBASIC1.85□□□□□ -2.11
SMKR1H3BMG3 AL645944.1-201ENST00000603857 493 ntBASIC1.85□□□□□ -2.11
SMKR1H3BMG3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.85□□□□□ -2.11
SMKR1H3BMG3 AC006338.1-201ENST00000618453 749 ntBASIC1.85□□□□□ -2.11
SMKR1H3BMG3 MIR5739-201ENST00000619803 80 ntBASIC1.85□□□□□ -2.11
SMKR1H3BMG3 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.85□□□□□ -2.11
SMKR1H3BMG3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
SMKR1H3BMG3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.84□□□□□ -2.11
SMKR1H3BMG3 AL355596.1-201ENST00000565399 3996 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SMKR1H3BMG3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SMKR1H3BMG3 RNU6-660P-201ENST00000364566 109 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 RNU1-100P-201ENST00000365255 165 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 SNORA40C-201ENST00000391285 128 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 AL356057.3-201ENST00000402607 340 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 MTCO2P17-201ENST00000424336 677 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 AC019097.1-201ENST00000424783 735 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.84□□□□□ -2.11
SMKR1H3BMG3 AC098826.1-201ENST00000433943 471 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 CR769767.1-201ENST00000436337 346 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 SDR42E1P3-201ENST00000438345 502 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 AL354941.1-201ENST00000438600 464 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 RPL22P17-201ENST00000438729 315 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 AL078601.1-201ENST00000444542 271 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.84□□□□□ -2.11
SMKR1H3BMG3 AC090515.1-201ENST00000465295 476 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 AL672167.3-201ENST00000465951 960 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.84□□□□□ -2.11
SMKR1H3BMG3 GTF2IP9-201ENST00000502460 301 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 AC109927.2-201ENST00000506416 303 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 SNORA31.11-201ENST00000516528 139 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 RNU5B-3P-201ENST00000516601 115 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 RNU7-193P-201ENST00000516723 65 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 RNU6-1315P-201ENST00000517187 99 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 AC118273.2-201ENST00000532092 465 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC1.84□□□□□ -2.11
SMKR1H3BMG3 PRELID2P1-201ENST00000552837 301 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC1.84□□□□□ -2.11
SMKR1H3BMG3 AL354943.1-201ENST00000572103 781 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 MIR1273C-201ENST00000578669 77 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 AP000811.1-201ENST00000603803 651 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 AC018714.1-201ENST00000605028 208 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 RNU6-91P-201ENST00000607774 107 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 AC016597.2-201ENST00000613256 341 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 MIR7975-201ENST00000619350 68 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.84□□□□□ -2.11
SMKR1H3BMG3 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.84□□□□□ -2.11
SMKR1H3BMG3 AC010149.2-201ENST00000637608 315 ntBASIC1.84□□□□□ -2.11
SMKR1H3BMG3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
SMKR1H3BMG3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
SMKR1H3BMG3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
SMKR1H3BMG3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
SMKR1H3BMG3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.83□□□□□ -2.12
SMKR1H3BMG3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
SMKR1H3BMG3 AC138393.1-203ENST00000327086 343 ntBASIC1.83□□□□□ -2.12
SMKR1H3BMG3 RNY4P16-201ENST00000364768 94 ntBASIC1.83□□□□□ -2.12
SMKR1H3BMG3 RNA5SP240-201ENST00000365355 128 ntBASIC1.83□□□□□ -2.12
SMKR1H3BMG3 SNORA9-201ENST00000384215 133 ntBASIC1.83□□□□□ -2.12
SMKR1H3BMG3 PTMAP2-201ENST00000397627 327 ntBASIC1.83□□□□□ -2.12
SMKR1H3BMG3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.83□□□□□ -2.12
SMKR1H3BMG3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.83□□□□□ -2.12
SMKR1H3BMG3 RPL23AP39-201ENST00000415533 405 ntBASIC1.83□□□□□ -2.12
SMKR1H3BMG3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.83□□□□□ -2.12
SMKR1H3BMG3 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SMKR1H3BMG3 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.83□□□□□ -2.12
SMKR1H3BMG3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.83□□□□□ -2.12
SMKR1H3BMG3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.83□□□□□ -2.12
SMKR1H3BMG3 GCA-203ENST00000429691 824 ntTSL 3 BASIC1.83□□□□□ -2.12
SMKR1H3BMG3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.83□□□□□ -2.12
SMKR1H3BMG3 AL353706.1-201ENST00000436728 494 ntBASIC1.83□□□□□ -2.12
SMKR1H3BMG3 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.83□□□□□ -2.12
SMKR1H3BMG3 AL606662.1-201ENST00000445763 553 ntBASIC1.83□□□□□ -2.12
SMKR1H3BMG3 AC003071.1-201ENST00000451219 789 ntBASIC1.83□□□□□ -2.12
SMKR1H3BMG3 AC112771.1-201ENST00000463581 102 ntBASIC1.83□□□□□ -2.12
SMKR1H3BMG3 AC117503.1-201ENST00000472241 394 ntBASIC1.83□□□□□ -2.12
SMKR1H3BMG3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SMKR1H3BMG3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.83□□□□□ -2.12
SMKR1H3BMG3 RPS3AP22-201ENST00000488297 769 ntBASIC1.83□□□□□ -2.12
SMKR1H3BMG3 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.83□□□□□ -2.12
SMKR1H3BMG3 FAM92A1P2-202ENST00000504766 877 ntBASIC1.83□□□□□ -2.12
SMKR1H3BMG3 RNA5SP282-201ENST00000516355 108 ntBASIC1.83□□□□□ -2.12
SMKR1H3BMG3 AC022616.6-201ENST00000520479 119 ntBASIC1.83□□□□□ -2.12
SMKR1H3BMG3 AC011979.2-201ENST00000527568 352 ntBASIC1.83□□□□□ -2.12
SMKR1H3BMG3 CYCSP26-201ENST00000534107 320 ntBASIC1.83□□□□□ -2.12
SMKR1H3BMG3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.83□□□□□ -2.12
SMKR1H3BMG3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.83□□□□□ -2.12
SMKR1H3BMG3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.83□□□□□ -2.12
SMKR1H3BMG3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.83□□□□□ -2.12
SMKR1H3BMG3 MIR3118-1-201ENST00000581787 76 ntBASIC1.83□□□□□ -2.12
SMKR1H3BMG3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.83□□□□□ -2.12
SMKR1H3BMG3 AC025165.5-201ENST00000602802 578 ntBASIC1.83□□□□□ -2.12
SMKR1H3BMG3 AL670379.10-201ENST00000604330 253 ntBASIC1.83□□□□□ -2.12
SMKR1H3BMG3 AL670379.9-201ENST00000605428 253 ntBASIC1.83□□□□□ -2.12
SMKR1H3BMG3 AC107952.2-201ENST00000606048 486 ntBASIC1.83□□□□□ -2.12
SMKR1H3BMG3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SMKR1H3BMG3 TUSC7.1-201ENST00000610969 165 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms