Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 AL390237.1-201ENST00000404226 1415 ntBASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 AC004972.1-201ENST00000623934 2209 ntBASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 U3.6-201ENST00000363622 211 ntBASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 RNA5SP139-201ENST00000364340 117 ntBASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 RNU6-190P-201ENST00000384154 102 ntBASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 SNORA75-201ENST00000384158 137 ntBASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 Y_RNA.500-201ENST00000384466 111 ntBASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 AL365496.1-201ENST00000426885 215 ntBASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 AC009414.1-201ENST00000427200 443 ntBASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 AC236972.1-201ENST00000433225 199 ntBASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 AL353706.1-201ENST00000436728 494 ntBASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 UQCRHP3-201ENST00000451503 251 ntBASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 AC004924.1-201ENST00000480160 781 ntBASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 RPL36AP51-201ENST00000487216 318 ntBASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 AC114786.4-201ENST00000508771 728 ntBASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 AC117522.1-201ENST00000509821 380 ntBASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 SCGB1D5P-201ENST00000515134 247 ntBASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 AC022447.1-201ENST00000515358 464 ntBASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 AC245166.1-201ENST00000521012 253 ntBASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 AC012213.3-201ENST00000577199 777 ntBASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 AL033523.1-201ENST00000605153 153 ntBASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 DUSP12P1-201ENST00000612874 516 ntBASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 AC002064.3-201ENST00000623448 346 ntBASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 LRRC77P-213ENST00000637727 880 ntBASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.72□□□□□ -1.97
NPIPA3F8WFD2 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
NPIPA3F8WFD2 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.97
NPIPA3F8WFD2 AL359693.1-201ENST00000614959 2407 ntBASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 Y_RNA.22-201ENST00000362492 102 ntBASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 RNU1-105P-201ENST00000363470 161 ntBASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 Y_RNA.359-201ENST00000365498 102 ntBASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 U8.9-201ENST00000365667 134 ntBASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 SNORA46-201ENST00000384762 135 ntBASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 MIR767-201ENST00000390228 109 ntBASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 SKA2P1-201ENST00000425592 390 ntBASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 MED13P1-201ENST00000428342 171 ntBASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 KLF3P2-201ENST00000465138 268 ntBASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 UBE2DNL-203ENST00000474922 222 ntBASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 MTND4P2-201ENST00000507767 1203 ntBASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 AC068657.1-201ENST00000520807 306 ntBASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 AC008739.2-201ENST00000597006 317 ntBASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 AC174048.1-201ENST00000603389 144 ntBASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 AC245014.2-201ENST00000603689 287 ntBASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 AC246785.4-201ENST00000605374 287 ntBASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 AL121992.2-201ENST00000606262 256 ntBASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 AC068880.5-201ENST00000624331 290 ntBASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 AP003399.1-201ENST00000637534 361 ntBASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.71□□□□□ -1.98
NPIPA3F8WFD2 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.7□□□□□ -1.98
NPIPA3F8WFD2 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
NPIPA3F8WFD2 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NPIPA3F8WFD2 Y_RNA.51-201ENST00000362725 102 ntBASIC2.7□□□□□ -1.98
NPIPA3F8WFD2 SNORA4.3-201ENST00000365564 137 ntBASIC2.7□□□□□ -1.98
NPIPA3F8WFD2 RNU1-73P-201ENST00000383971 164 ntBASIC2.7□□□□□ -1.98
NPIPA3F8WFD2 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NPIPA3F8WFD2 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
NPIPA3F8WFD2 RPL21P75-201ENST00000396599 483 ntBASIC2.7□□□□□ -1.98
NPIPA3F8WFD2 RPL21P28-201ENST00000401418 483 ntBASIC2.7□□□□□ -1.98
NPIPA3F8WFD2 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NPIPA3F8WFD2 AL592114.1-201ENST00000403842 483 ntBASIC2.7□□□□□ -1.98
NPIPA3F8WFD2 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.7□□□□□ -1.98
NPIPA3F8WFD2 MTND3P17-201ENST00000416968 344 ntBASIC2.7□□□□□ -1.98
NPIPA3F8WFD2 MTND4P32-201ENST00000437189 1237 ntBASIC2.7□□□□□ -1.98
NPIPA3F8WFD2 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.7□□□□□ -1.98
NPIPA3F8WFD2 MTCYBP1-201ENST00000454315 1119 ntBASIC2.7□□□□□ -1.98
NPIPA3F8WFD2 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.7□□□□□ -1.98
NPIPA3F8WFD2 RPL21P39-201ENST00000463605 483 ntBASIC2.7□□□□□ -1.98
NPIPA3F8WFD2 AC117440.1-201ENST00000474107 571 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms