Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 MTCO2P16-201ENST00000436962 677 ntBASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 Z82210.1-201ENST00000440037 231 ntBASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 AC010099.1-201ENST00000455434 375 ntBASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 RPL31P3-201ENST00000458430 332 ntBASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 AC087588.1-201ENST00000462203 316 ntBASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 MTCO2P29-201ENST00000465212 189 ntBASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 AC117522.2-201ENST00000510049 657 ntBASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 RNA5SP282-201ENST00000516355 108 ntBASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 RNU6-928P-201ENST00000516876 104 ntBASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 AP001646.1-201ENST00000527936 915 ntBASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 RPS3AP4-201ENST00000555161 764 ntBASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 HMGB1P14-201ENST00000557424 591 ntBASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 AC136601.2-201ENST00000604356 474 ntBASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 AC013412.1-201ENST00000610687 192 ntBASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 AC107871.2-201ENST00000612894 502 ntBASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 AL390237.1-201ENST00000404226 1415 ntBASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 SNORA14A-201ENST00000364773 135 ntBASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 RNU6-701P-201ENST00000384059 107 ntBASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 AL590004.2-201ENST00000404787 371 ntBASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 HMGB3P12-201ENST00000438745 556 ntBASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 PIGFP3-201ENST00000441918 722 ntBASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 MTCO1P19-201ENST00000443487 500 ntBASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 SNORD97-201ENST00000459187 142 ntBASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 MIR3167-201ENST00000579623 85 ntBASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 AC002545.1-201ENST00000592511 181 ntBASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 AC079089.3-201ENST00000603094 673 ntBASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 AL358072.1-201ENST00000604156 575 ntBASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 AC090578.1-201ENST00000604955 591 ntBASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 AC004908.3-201ENST00000610248 625 ntBASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 AC034102.8-201ENST00000615146 484 ntBASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 AC008250.2-201ENST00000615261 205 ntBASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 AP001506.1-201ENST00000615444 211 ntBASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 AC009509.4-201ENST00000619202 509 ntBASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
NEDD8-MDP1E9PL57 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
NEDD8-MDP1E9PL57 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
NEDD8-MDP1E9PL57 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 SMIM11P1-201ENST00000369586 178 ntBASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 SNORA75-201ENST00000384158 137 ntBASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 RNU6-217P-201ENST00000384164 104 ntBASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 RNU6-348P-201ENST00000384386 107 ntBASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 RNU6-1035P-201ENST00000384477 107 ntBASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 MRPL42P2-201ENST00000403169 426 ntBASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 HMGN2P35-201ENST00000412164 270 ntBASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 AC006366.1-201ENST00000422002 759 ntBASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 AC007919.1-201ENST00000429380 217 ntBASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 AC010153.1-201ENST00000432862 727 ntBASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 RPL32P28-201ENST00000443577 397 ntBASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 AL360221.1-201ENST00000445989 335 ntBASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 SNRPGP6-201ENST00000451124 220 ntBASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 AC013267.1-201ENST00000458227 267 ntBASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 snoU109.1-201ENST00000459339 135 ntBASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 NDUFB4P2-201ENST00000509515 391 ntBASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 RNA5SP320-201ENST00000516263 124 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms