Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RNU6-64P-201ENST00000517119 105 ntBASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 DEFB108D-201ENST00000527787 222 ntBASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 AP000889.2-201ENST00000532684 490 ntBASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 ARL2BPP2-201ENST00000550907 489 ntBASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 RPL21P5-201ENST00000554662 472 ntBASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 MIR4528-201ENST00000577763 90 ntBASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 AC006338.1-201ENST00000618453 749 ntBASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 MIR1291-201ENST00000627649 87 ntBASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 AC016717.2-201ENST00000609089 5141 ntBASIC2.34□□□□□ -2.04
TRIM49D1C9J1S8 AL138713.1-201ENST00000624026 2130 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 AC062016.1-201ENST00000355719 319 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 RNU6-1119P-201ENST00000384349 108 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 Y_RNA.559-201ENST00000384686 107 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 RPS3AP3-201ENST00000411933 242 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 BX295541.1-201ENST00000417774 250 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 RPS15AP12-201ENST00000419498 388 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 BEND7P1-201ENST00000422058 457 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 AC236972.1-201ENST00000433225 199 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 RPS15AP9-201ENST00000439856 381 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 GAPDHP17-201ENST00000449858 1001 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 AC108938.1-201ENST00000451204 136 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 UBE2DNL-203ENST00000474922 222 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 RPS15AP36-201ENST00000492022 382 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 MTND4P2-201ENST00000507767 1203 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 TTC39CP1-201ENST00000512513 755 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 AP001804.3-201ENST00000525146 880 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 AC025281.1-201ENST00000567026 265 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 AC012213.3-201ENST00000577199 777 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 MIR4672-201ENST00000583126 81 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 NBR2-204ENST00000587322 63 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 AC006023.1-201ENST00000603944 259 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 AC011451.2-201ENST00000604303 598 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 AC112187.2-201ENST00000604345 283 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 AL136363.1-201ENST00000605349 337 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 AC012443.1-201ENST00000605605 231 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 TUG1_1.1-201ENST00000610654 145 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 AC009268.2-201ENST00000621925 457 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 AC092656.1-203ENST00000624134 423 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 AC110994.2-201ENST00000635481 492 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 OR4G2P-202ENST00000641004 1759 ntBASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.33□□□□□ -2.04
TRIM49D1C9J1S8 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 ZNF519P1-201ENST00000449011 1626 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 MIRLET7G-201ENST00000362280 84 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 RNU6-282P-201ENST00000365357 103 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 RNU6-637P-201ENST00000384050 107 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 SNORA36C-201ENST00000384289 132 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 MIR493-201ENST00000385254 89 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 UBE2V1P2-201ENST00000397758 440 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 RNU2-36P-201ENST00000410361 191 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 RNA5SP184-201ENST00000411071 108 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 SPA17P1-201ENST00000416656 452 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 NUP35P1-201ENST00000422734 947 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 AC063976.3-201ENST00000426849 329 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 RPL31P35-201ENST00000431058 377 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 RPS15AP28-201ENST00000435088 386 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 TIMM9P1-201ENST00000436122 256 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 RPS24P1-201ENST00000438550 371 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 AC244505.5-201ENST00000443639 207 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms