Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.55□□□□□ -2
SRRM4A7MD48 NACAP2-201ENST00000318548 624 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 RNU6-778P-201ENST00000363269 103 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 RNU6-188P-201ENST00000364207 107 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 RNU6-395P-201ENST00000365662 106 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
SRRM4A7MD48 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SRRM4A7MD48 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.55□□□□□ -2
SRRM4A7MD48 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SRRM4A7MD48 RNU6-259P-201ENST00000383999 107 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 Y_RNA.534-201ENST00000384599 112 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 AL645937.1-202ENST00000421799 937 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 BPY2DP-201ENST00000422208 265 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 AC098614.2-201ENST00000426040 255 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.55□□□□□ -2
SRRM4A7MD48 RPL31P35-201ENST00000431058 377 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 AC009969.1-201ENST00000438726 172 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.55□□□□□ -2
SRRM4A7MD48 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.55□□□□□ -2
SRRM4A7MD48 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.55□□□□□ -2
SRRM4A7MD48 SNORA84-201ENST00000459229 133 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.55□□□□□ -2
SRRM4A7MD48 TRBV1-201ENST00000476502 284 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 AC004924.1-201ENST00000480160 781 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 AC023194.1-201ENST00000493084 308 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 RPS27P26-201ENST00000494583 239 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.55□□□□□ -2
SRRM4A7MD48 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.55□□□□□ -2
SRRM4A7MD48 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.55□□□□□ -2
SRRM4A7MD48 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
SRRM4A7MD48 SEM1P1-201ENST00000506694 209 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 AC108078.2-201ENST00000510750 236 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 AC113155.1-201ENST00000511141 769 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.55□□□□□ -2
SRRM4A7MD48 Y_RNA.689-201ENST00000516589 107 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 AC090572.1-201ENST00000519251 160 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.55□□□□□ -2
SRRM4A7MD48 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.55□□□□□ -2
SRRM4A7MD48 AC134698.4-201ENST00000523451 826 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 AP003122.3-201ENST00000526316 255 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.55□□□□□ -2
SRRM4A7MD48 AC084851.1-201ENST00000529105 249 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 RANP3-201ENST00000530970 276 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.55□□□□□ -2
SRRM4A7MD48 AC136619.2-201ENST00000563361 631 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 AC010653.1-201ENST00000571108 881 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.55□□□□□ -2
SRRM4A7MD48 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.55□□□□□ -2
SRRM4A7MD48 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.55□□□□□ -2
SRRM4A7MD48 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.55□□□□□ -2
SRRM4A7MD48 AL355877.2-201ENST00000603670 358 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 MTND4P35-201ENST00000604257 1375 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 MIR3199-2-201ENST00000636243 86 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 U6.114-201ENST00000636407 96 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 Z99571.1-201ENST00000636677 394 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.55□□□□□ -2
SRRM4A7MD48 AC103710.2-202ENST00000641454 2853 ntBASIC2.55□□□□□ -2
SRRM4A7MD48 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.54□□□□□ -2
SRRM4A7MD48 AL355596.1-201ENST00000565399 3996 ntBASIC2.54□□□□□ -2
SRRM4A7MD48 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.54□□□□□ -2
SRRM4A7MD48 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
SRRM4A7MD48 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.54□□□□□ -2
SRRM4A7MD48 MTCO1P12-201ENST00000414273 1543 ntBASIC2.54□□□□□ -2
SRRM4A7MD48 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
SRRM4A7MD48 OR5J1P-201ENST00000313544 939 ntBASIC2.54□□□□□ -2
SRRM4A7MD48 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.54□□□□□ -2
SRRM4A7MD48 RNU5A-6P-201ENST00000384136 116 ntBASIC2.54□□□□□ -2
SRRM4A7MD48 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.54□□□□□ -2
SRRM4A7MD48 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.54□□□□□ -2
SRRM4A7MD48 MIR548F1-201ENST00000408667 84 ntBASIC2.54□□□□□ -2
SRRM4A7MD48 MIR1289-1-201ENST00000408836 144 ntBASIC2.54□□□□□ -2
SRRM4A7MD48 USP9YP6-201ENST00000413550 854 ntBASIC2.54□□□□□ -2
SRRM4A7MD48 AL158156.1-201ENST00000422509 473 ntBASIC2.54□□□□□ -2
SRRM4A7MD48 AL353729.1-201ENST00000425044 720 ntBASIC2.54□□□□□ -2
SRRM4A7MD48 RPS15AP5-201ENST00000436276 388 ntBASIC2.54□□□□□ -2
SRRM4A7MD48 RPS12P18-201ENST00000442381 270 ntBASIC2.54□□□□□ -2
SRRM4A7MD48 RPS15AP27-201ENST00000449183 343 ntBASIC2.54□□□□□ -2
SRRM4A7MD48 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.54□□□□□ -2
SRRM4A7MD48 ELOCP23-201ENST00000452014 332 ntBASIC2.54□□□□□ -2
SRRM4A7MD48 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.54□□□□□ -2
SRRM4A7MD48 AC126182.1-201ENST00000478134 357 ntBASIC2.54□□□□□ -2
SRRM4A7MD48 RPS27AP10-201ENST00000496103 208 ntBASIC2.54□□□□□ -2
SRRM4A7MD48 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.54□□□□□ -2
SRRM4A7MD48 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.54□□□□□ -2
SRRM4A7MD48 SCARNA24.1-201ENST00000516465 137 ntBASIC2.54□□□□□ -2
SRRM4A7MD48 SNORD19.2-201ENST00000516978 73 ntBASIC2.54□□□□□ -2
SRRM4A7MD48 RNU6-430P-201ENST00000517078 107 ntBASIC2.54□□□□□ -2
SRRM4A7MD48 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.54□□□□□ -2
SRRM4A7MD48 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.54□□□□□ -2
SRRM4A7MD48 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.54□□□□□ -2
SRRM4A7MD48 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.54□□□□□ -2
SRRM4A7MD48 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.54□□□□□ -2
SRRM4A7MD48 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.54□□□□□ -2
SRRM4A7MD48 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.54□□□□□ -2
SRRM4A7MD48 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.54□□□□□ -2
SRRM4A7MD48 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
SRRM4A7MD48 HMGN2P15-201ENST00000585707 270 ntBASIC2.54□□□□□ -2
SRRM4A7MD48 AC099778.2-201ENST00000610904 211 ntBASIC2.54□□□□□ -2
SRRM4A7MD48 AC012409.4-201ENST00000612923 249 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms