Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 RNA5SP257-201ENST00000363023 116 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 CD24P4-201ENST00000382840 243 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 SNORA18.2-201ENST00000383865 132 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 RPL21P66-201ENST00000426566 466 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 SEPT7P5-201ENST00000434048 306 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 GXYLT1P1-201ENST00000446657 490 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AL031659.1-201ENST00000447075 539 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AC234775.1-201ENST00000454247 670 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 NAP1L1P3-201ENST00000462291 880 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 RNA5SP216-201ENST00000516111 123 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 RNA5SP364-201ENST00000516938 78 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AC087808.1-201ENST00000520501 361 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 DEFB131D-201ENST00000526803 184 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 BNIP3P31-201ENST00000604515 566 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AC069304.2-201ENST00000605154 435 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AC083806.3-201ENST00000614016 455 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AL049777.1-201ENST00000622740 518 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AP000560.1-201ENST00000624150 1937 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 RNU2-43P-201ENST00000410306 190 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 RNU4-65P-201ENST00000410473 140 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AC068533.2-201ENST00000411872 306 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 EBAG9P1-201ENST00000418955 543 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 RPS3AP44-201ENST00000425466 790 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 RPS29P29-201ENST00000456396 171 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AC026410.2-201ENST00000460281 156 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AC113420.1-201ENST00000507903 571 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AC010460.2-201ENST00000509054 677 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AC093281.2-201ENST00000510153 597 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 RNU6-113P-201ENST00000516653 101 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 RNU6-1073P-201ENST00000517182 106 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 OR5AQ1P-201ENST00000527596 927 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 MTCYBP41-201ENST00000528913 1123 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 NDUFS5P6-201ENST00000529136 295 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AL132657.2-201ENST00000564417 358 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AC022662.1-201ENST00000580252 331 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AL390240.1-201ENST00000612950 384 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 MIR6130-201ENST00000619419 109 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AC091925.2-201ENST00000625059 256 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AC016716.1-201ENST00000265882 708 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AL596028.1-201ENST00000326971 197 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 MIR373-201ENST00000362273 69 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 RNU6-1074P-201ENST00000383995 104 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 RNU6-882P-201ENST00000391025 103 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AL033519.2-201ENST00000403958 392 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 MTND1P23-201ENST00000416931 372 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AL356320.2-201ENST00000417263 507 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 RPL35AP22-201ENST00000436855 335 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 MTCO1P27-201ENST00000448269 226 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 USP9YP25-201ENST00000457708 443 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 RNU7-140P-201ENST00000459546 60 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 MTND1P16-201ENST00000465177 898 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AC096571.1-202ENST00000506634 735 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 SUMO2P5-201ENST00000506790 245 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 RNU6-405P-201ENST00000516637 110 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 CYB5AP5-201ENST00000549779 389 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AL390208.1-201ENST00000605885 644 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AC097478.2-201ENST00000610572 514 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AC006213.4-201ENST00000616184 634 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AC006338.1-201ENST00000618453 749 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 RBBP8P1-201ENST00000449447 1844 ntBASIC1.19□□□□□ -2.22
COL6A6A6NMZ7 AC009541.1-201ENST00000438279 2662 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 RNU6-1181P-201ENST00000384191 106 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 SNORA1.3-201ENST00000384676 136 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 MIR506-201ENST00000384998 124 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 AL356421.1-201ENST00000403255 413 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms