Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 MIR5047-201ENST00000579212 100 ntBASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 MIR5583-1-201ENST00000580941 59 ntBASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 BNIP3P9-201ENST00000603714 553 ntBASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 AC107294.1-201ENST00000609524 467 ntBASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 SNORA4.3-201ENST00000365564 137 ntBASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 RNU6-38P-201ENST00000384085 107 ntBASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 RNY3P14-201ENST00000384309 102 ntBASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 SNORD37.1-201ENST00000390968 65 ntBASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 AL139039.1-201ENST00000401900 692 ntBASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 AL606923.1-201ENST00000406616 190 ntBASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 RN7SKP285-201ENST00000410137 318 ntBASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 AC092047.1-201ENST00000424997 240 ntBASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 AC104058.1-201ENST00000448028 297 ntBASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 MTND3P16-201ENST00000452205 344 ntBASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 FABP5P15-201ENST00000453566 214 ntBASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 RNU6-333P-201ENST00000459117 107 ntBASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 SNRPGP3-201ENST00000469405 227 ntBASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 AC084357.1-201ENST00000473404 255 ntBASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 AC074344.1-201ENST00000512823 224 ntBASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 AC060780.3-201ENST00000589464 80 ntBASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 AL138889.2-201ENST00000603883 242 ntBASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 DUXAP9-208ENST00000622815 614 ntBASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 Z99571.1-201ENST00000636677 394 ntBASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 AC099654.14-201ENST00000638599 341 ntBASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 AF127577.6-201ENST00000623352 2191 ntBASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 OR4G1P-203ENST00000641984 1631 ntBASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TBC1D3FA6NER0 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 AC093010.3-201ENST00000570269 15214 ntBASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 AC073073.2-201ENST00000609827 2578 ntBASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 Y_RNA.245-201ENST00000364493 95 ntBASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 Y_RNA.303-201ENST00000364998 94 ntBASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 MIR514A2-201ENST00000385131 88 ntBASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 MIR514A3-201ENST00000385132 88 ntBASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 EEF1A1P40-201ENST00000412883 573 ntBASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 AC017079.2-201ENST00000416102 485 ntBASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 AL139413.1-201ENST00000421309 217 ntBASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 AL591704.1-201ENST00000432574 275 ntBASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 Z82210.1-201ENST00000440037 231 ntBASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 MTCO3P18-201ENST00000440206 761 ntBASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 CYCSP32-201ENST00000440548 321 ntBASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 MTND4P18-201ENST00000447010 465 ntBASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 RNA5SP310-201ENST00000459084 116 ntBASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 MTCYBP18-201ENST00000501056 747 ntBASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 AC009901.1-201ENST00000506703 541 ntBASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 RNA5SP290-201ENST00000517133 127 ntBASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 RNA5SP291-201ENST00000517222 105 ntBASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 AF235103.2-201ENST00000525753 346 ntBASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 PSMA2P1-201ENST00000526365 646 ntBASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 AL137161.1-201ENST00000532231 390 ntBASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 MIR4276-201ENST00000584832 70 ntBASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 AC136601.2-201ENST00000604356 474 ntBASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 AC009570.1-201ENST00000609599 745 ntBASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 AL390240.1-201ENST00000612950 384 ntBASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 AC092628.2-201ENST00000622492 339 ntBASIC3.42□□□□□ -1.86
TBC1D3FA6NER0 AC027309.3-201ENST00000623419 351 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms