Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC009977.1-201ENST00000586015 570 ntBASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 AL161798.1-201ENST00000604630 131 ntBASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 AC073114.1-201ENST00000612027 490 ntBASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 AC107871.2-201ENST00000612894 502 ntBASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 AC008250.2-201ENST00000615261 205 ntBASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 UCA1.1-201ENST00000620952 75 ntBASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 AC009487.2-201ENST00000420969 6821 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 AL161431.1-201ENST00000618966 4205 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 OR5J1P-201ENST00000313544 939 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 MIR26A1-201ENST00000362205 77 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 RNY3P10-201ENST00000384764 102 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 RNU6-817P-201ENST00000391083 104 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 RPL21P75-201ENST00000396599 483 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 RPL21P28-201ENST00000401418 483 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 AL592114.1-201ENST00000403842 483 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 AC098831.1-201ENST00000440661 216 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 USP9YP15-201ENST00000442391 422 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 TAF9P1-201ENST00000445421 515 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 RPS15AP27-201ENST00000449183 343 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 FABP5P15-201ENST00000453566 214 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 TAF9P2-201ENST00000454958 515 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 MTND1P12-201ENST00000455231 147 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 RPL21P39-201ENST00000463605 483 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 RPL21P93-201ENST00000480465 489 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 AC087190.1-201ENST00000484462 480 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 AC093591.1-201ENST00000491435 481 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 RPL21P16-201ENST00000495531 483 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 SUMO2P6-201ENST00000505273 288 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 RNU6-56P-201ENST00000516986 93 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 RNA5SP337-201ENST00000517007 109 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 AC010546.1-201ENST00000569391 485 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 HMGN2P15-201ENST00000585707 270 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 ELOCP29-201ENST00000588193 334 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 CLIC4P2-201ENST00000601934 717 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 AL590229.1-201ENST00000603497 542 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 AC098826.3-201ENST00000603823 466 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 AL355598.1-201ENST00000604169 202 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 AC007619.2-201ENST00000605743 379 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 AC068276.1-201ENST00000605793 379 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 AC103710.2-201ENST00000609912 942 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 AC099654.13-201ENST00000639774 207 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 AC110491.1-201ENST00000562191 2010 ntBASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
ATG4BQ9Y4P1 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 UBE2L2-201ENST00000254302 429 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 RNU6-778P-201ENST00000363269 103 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 SNORA5B-201ENST00000363786 132 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 RNU6-884P-201ENST00000363889 107 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 RNU6-512P-201ENST00000364438 103 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 RNY4P34-201ENST00000364779 95 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 AL138827.1-201ENST00000402666 306 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 AL139397.2-201ENST00000404529 772 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 AL590004.2-201ENST00000404787 371 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 AC096649.2-201ENST00000416186 393 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 SEPT2P1-201ENST00000419651 180 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 AC090960.1-201ENST00000421072 306 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 BPY2DP-201ENST00000422208 265 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 AC104651.1-201ENST00000427559 735 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 AC087499.2-201ENST00000432861 149 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 AC105272.1-201ENST00000438604 198 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 NEFMP1-201ENST00000443423 1006 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 CECR9-201ENST00000453421 199 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 RN7SL432P-201ENST00000484057 298 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 Y_RNA.672-201ENST00000516289 104 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 SNORA9.3-201ENST00000516383 129 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 AP003467.2-201ENST00000520175 319 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 AP006587.4-201ENST00000526053 529 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 AC011979.2-201ENST00000527568 352 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 AC079600.2-201ENST00000550076 130 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 GTF3AP2-201ENST00000557014 266 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 AC012414.6-201ENST00000568241 401 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms