Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 SNORA46.1-201ENST00000391069 153 ntBASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 MIR320C1-201ENST00000408566 88 ntBASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 RN7SKP266-201ENST00000410232 287 ntBASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 USP9YP33-201ENST00000412220 421 ntBASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 AC083875.1-201ENST00000419509 405 ntBASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 AC097463.2-201ENST00000421074 142 ntBASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 USP9YP35-201ENST00000435696 412 ntBASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 AP000542.1-201ENST00000448473 371 ntBASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 AC004263.1-201ENST00000479327 332 ntBASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 CBX3P7-201ENST00000532876 502 ntBASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 MIR5002-201ENST00000584713 97 ntBASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 AC021171.1-201ENST00000603137 706 ntBASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 RPL21P136-201ENST00000605378 396 ntBASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 AC007038.2-201ENST00000608095 740 ntBASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 Z75746.1-201ENST00000440243 2080 ntBASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 RNU6-1284P-201ENST00000363701 100 ntBASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 NDUFS5P1-201ENST00000405668 289 ntBASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 AL353621.1-201ENST00000418219 243 ntBASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 WARS2P1-201ENST00000429678 537 ntBASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 AC005094.1-201ENST00000440420 368 ntBASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 AC009238.1-201ENST00000442165 424 ntBASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 MTATP6P30-201ENST00000443540 664 ntBASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 AC009237.6-201ENST00000446969 424 ntBASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 CKS1BP2-201ENST00000497342 240 ntBASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 RNA5SP137-201ENST00000516833 135 ntBASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 AC012435.1-202ENST00000568772 240 ntBASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 DNAJC19P3-201ENST00000594491 331 ntBASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 AL606834.3-201ENST00000602615 496 ntBASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 AC009233.1-201ENST00000616477 371 ntBASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 AC009159.1-201ENST00000618386 642 ntBASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 AL121895.2-201ENST00000619558 447 ntBASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 AC025034.2-201ENST00000623264 286 ntBASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 KPNA2P1-201ENST00000458289 1591 ntBASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
RHBDD3Q9Y3P4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 MTND5P33-201ENST00000571250 1450 ntBASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 CKAP2P1-201ENST00000555477 2049 ntBASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 RNA5SP289-201ENST00000362332 137 ntBASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 RNU6-462P-201ENST00000362659 105 ntBASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 Y_RNA.510-201ENST00000384511 114 ntBASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 AL139397.2-201ENST00000404529 772 ntBASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 AL359704.1-201ENST00000411586 781 ntBASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 AC107081.1-201ENST00000414975 361 ntBASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 EDDM3CP-201ENST00000415977 425 ntBASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 RPL7P12-201ENST00000446719 750 ntBASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 AL031659.1-201ENST00000447075 539 ntBASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 MTCO1P27-201ENST00000448269 226 ntBASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 RPL21P134-201ENST00000453468 483 ntBASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 RPL36AP48-201ENST00000485521 314 ntBASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 AC107032.1-201ENST00000485945 480 ntBASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 GTF2IP9-201ENST00000502460 301 ntBASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms